Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV13l09r
         (716 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ007714-1|CAA07619.2|  926|Homo sapiens lysine-ketoglutarate re...   149   1e-35
AF229180-1|AAF44328.1|  926|Homo sapiens alpha-aminoadipate semi...   149   1e-35
AC006020-2|AAF03526.1|  926|Homo sapiens lysine ketoglutarate re...   149   1e-35
J04031-1|AAA59574.1|  935|Homo sapiens MTHFD protein.                  31   4.1  
BC050420-1|AAH50420.1|  935|Homo sapiens methylenetetrahydrofola...    31   4.1  
BC009806-1|AAH09806.1|  935|Homo sapiens methylenetetrahydrofola...    31   4.1  

>AJ007714-1|CAA07619.2|  926|Homo sapiens lysine-ketoglutarate
            reductase /saccharopine dehydrogenase protein.
          Length = 926

 Score =  149 bits (361), Expect = 1e-35
 Identities = 76/206 (36%), Positives = 122/206 (59%), Gaps = 4/206 (1%)
 Frame = -3

Query: 711  RGTIRYKGFAETMKALQLFGLVDPNSHPSLHPDGPNITWRQFACELLGLLDQSIFYDNLK 532
            RGT+RYKG+ + +      GL++  + P+  P+   +TW+Q  C+L+G+   S  +D LK
Sbjct: 722  RGTLRYKGYMKALNGFVKLGLINREALPAFRPEANPLTWKQLLCDLVGISPSSE-HDVLK 780

Query: 531  SRAAEQLGPVGAQ--AVESLGLLSDSEIVKCGTPLDTISHYLSKKLQLDKDETDFVVLRH 358
                ++LG    Q  A E LGLL D ++ +  + LD +S +L  KL    +E D +V+R 
Sbjct: 781  EAVLKKLGGDNTQLEAAEWLGLLGDEQVPQAESILDALSKHLVMKLSYGPEEKDMIVMRD 840

Query: 357  ELGVTWSDGKKEKREVTMTVRGDPASHTAMARTVGLPTAIAAKMVLDGEIQERGVVLPFA 178
              G+    G  E + + +   GD    +AMA+TVGLPTA+AAKM+LDGEI  +G++ PF+
Sbjct: 841  SFGIRHPSGHLEHKTIDLVAYGDINGFSAMAKTVGLPTAMAAKMLLDGEIGAKGLMGPFS 900

Query: 177  PVVYKSLLSRLRSDGI--TAKETSRP 106
              +Y  +L R++++GI  T + T +P
Sbjct: 901  KEIYGPILERIKAEGIIYTTQSTIKP 926


>AF229180-1|AAF44328.1|  926|Homo sapiens alpha-aminoadipate
            semialdehyde synthase protein.
          Length = 926

 Score =  149 bits (361), Expect = 1e-35
 Identities = 76/206 (36%), Positives = 122/206 (59%), Gaps = 4/206 (1%)
 Frame = -3

Query: 711  RGTIRYKGFAETMKALQLFGLVDPNSHPSLHPDGPNITWRQFACELLGLLDQSIFYDNLK 532
            RGT+RYKG+ + +      GL++  + P+  P+   +TW+Q  C+L+G+   S  +D LK
Sbjct: 722  RGTLRYKGYMKALNGFVKLGLINREALPAFRPEANPLTWKQLLCDLVGISPSSE-HDVLK 780

Query: 531  SRAAEQLGPVGAQ--AVESLGLLSDSEIVKCGTPLDTISHYLSKKLQLDKDETDFVVLRH 358
                ++LG    Q  A E LGLL D ++ +  + LD +S +L  KL    +E D +V+R 
Sbjct: 781  EAVLKKLGGDNTQLEAAEWLGLLGDEQVPQAESILDALSKHLVMKLSYGPEEKDMIVMRD 840

Query: 357  ELGVTWSDGKKEKREVTMTVRGDPASHTAMARTVGLPTAIAAKMVLDGEIQERGVVLPFA 178
              G+    G  E + + +   GD    +AMA+TVGLPTA+AAKM+LDGEI  +G++ PF+
Sbjct: 841  SFGIRHPSGHLEHKTIDLVAYGDINGFSAMAKTVGLPTAMAAKMLLDGEIGAKGLMGPFS 900

Query: 177  PVVYKSLLSRLRSDGI--TAKETSRP 106
              +Y  +L R++++GI  T + T +P
Sbjct: 901  KEIYGPILERIKAEGIIYTTQSTIKP 926


>AC006020-2|AAF03526.1|  926|Homo sapiens lysine ketoglutarate
            reductase/saccharopine dehydrogenase protein.
          Length = 926

 Score =  149 bits (361), Expect = 1e-35
 Identities = 76/206 (36%), Positives = 122/206 (59%), Gaps = 4/206 (1%)
 Frame = -3

Query: 711  RGTIRYKGFAETMKALQLFGLVDPNSHPSLHPDGPNITWRQFACELLGLLDQSIFYDNLK 532
            RGT+RYKG+ + +      GL++  + P+  P+   +TW+Q  C+L+G+   S  +D LK
Sbjct: 722  RGTLRYKGYMKALNGFVKLGLINREALPAFRPEANPLTWKQLLCDLVGISPSSE-HDVLK 780

Query: 531  SRAAEQLGPVGAQ--AVESLGLLSDSEIVKCGTPLDTISHYLSKKLQLDKDETDFVVLRH 358
                ++LG    Q  A E LGLL D ++ +  + LD +S +L  KL    +E D +V+R 
Sbjct: 781  EAVLKKLGGDNTQLEAAEWLGLLGDEQVPQAESILDALSKHLVMKLSYGPEEKDMIVMRD 840

Query: 357  ELGVTWSDGKKEKREVTMTVRGDPASHTAMARTVGLPTAIAAKMVLDGEIQERGVVLPFA 178
              G+    G  E + + +   GD    +AMA+TVGLPTA+AAKM+LDGEI  +G++ PF+
Sbjct: 841  SFGIRHPSGHLEHKTIDLVAYGDINGFSAMAKTVGLPTAMAAKMLLDGEIGAKGLMGPFS 900

Query: 177  PVVYKSLLSRLRSDGI--TAKETSRP 106
              +Y  +L R++++GI  T + T +P
Sbjct: 901  KEIYGPILERIKAEGIIYTTQSTIKP 926


>J04031-1|AAA59574.1|  935|Homo sapiens MTHFD protein.
          Length = 935

 Score = 31.1 bits (67), Expect = 4.1
 Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
 Frame = -3

Query: 639 NSHPSLHPDGPNITWRQFACELLGLLDQSIFYDNLKSRAAEQLGPVGAQAVESLGLLSDS 460
           N    L    P  T R  A   +G  D S  Y N+K +AAE++G + A  ++     ++S
Sbjct: 22  NQVTQLKEQVPGFTPR-LAILQVGNRDDSNLYINVKLKAAEEIG-IKATHIKLPRTTTES 79

Query: 459 EIVKCGTPL--DTISHYLSKKLQLDKDET 379
           E++K  T L  D+  H    +L LD + +
Sbjct: 80  EVMKYITSLNEDSTVHGFLVQLPLDSENS 108


>BC050420-1|AAH50420.1|  935|Homo sapiens methylenetetrahydrofolate
           dehydrogenase (NADP+ dependent) 1, methenyltetrahydro
           protein.
          Length = 935

 Score = 31.1 bits (67), Expect = 4.1
 Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
 Frame = -3

Query: 639 NSHPSLHPDGPNITWRQFACELLGLLDQSIFYDNLKSRAAEQLGPVGAQAVESLGLLSDS 460
           N    L    P  T R  A   +G  D S  Y N+K +AAE++G + A  ++     ++S
Sbjct: 22  NQVTQLKEQVPGFTPR-LAILQVGNRDDSNLYINVKLKAAEEIG-IKATHIKLPRTTTES 79

Query: 459 EIVKCGTPL--DTISHYLSKKLQLDKDET 379
           E++K  T L  D+  H    +L LD + +
Sbjct: 80  EVMKYITSLNEDSTVHGFLVQLPLDSENS 108


>BC009806-1|AAH09806.1|  935|Homo sapiens methylenetetrahydrofolate
           dehydrogenase (NADP+ dependent) 1, methenyltetrahydro
           protein.
          Length = 935

 Score = 31.1 bits (67), Expect = 4.1
 Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
 Frame = -3

Query: 639 NSHPSLHPDGPNITWRQFACELLGLLDQSIFYDNLKSRAAEQLGPVGAQAVESLGLLSDS 460
           N    L    P  T R  A   +G  D S  Y N+K +AAE++G + A  ++     ++S
Sbjct: 22  NQVTQLKEQVPGFTPR-LAILQVGNRDDSNLYINVKLKAAEEIG-IKATHIKLPRTTTES 79

Query: 459 EIVKCGTPL--DTISHYLSKKLQLDKDET 379
           E++K  T L  D+  H    +L LD + +
Sbjct: 80  EVMKYITSLNEDSTVHGFLVQLPLDSENS 108


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,485,991
Number of Sequences: 237096
Number of extensions: 2406040
Number of successful extensions: 4730
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4484
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4727
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8399192100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)