Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV13l09f
(653 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ007714-1|CAA07619.2| 926|Homo sapiens lysine-ketoglutarate re... 210 3e-54
AF229180-1|AAF44328.1| 926|Homo sapiens alpha-aminoadipate semi... 210 3e-54
AC006020-2|AAF03526.1| 926|Homo sapiens lysine ketoglutarate re... 210 3e-54
L14076-1|AAA36649.1| 494|Homo sapiens pre-mRNA splicing factor ... 32 2.1
BT007415-1|AAP36083.1| 494|Homo sapiens splicing factor, argini... 32 2.1
BC002781-1|AAH02781.1| 494|Homo sapiens splicing factor, argini... 32 2.1
AL590729-1|CAI14326.1| 494|Homo sapiens splicing factor, argini... 32 2.1
AL357500-1|CAH71635.1| 494|Homo sapiens splicing factor, argini... 32 2.1
AK223444-1|BAD97164.1| 382|Homo sapiens splicing factor, argini... 32 2.1
AB209856-1|BAD93093.1| 419|Homo sapiens splicing factor, argini... 32 2.1
BC101045-1|AAI01046.1| 766|Homo sapiens elastin microfibril int... 30 6.3
BC101044-1|AAI01045.1| 766|Homo sapiens elastin microfibril int... 30 6.3
BC101043-1|AAI01044.1| 766|Homo sapiens elastin microfibril int... 30 6.3
AL031667-1|CAI42976.1| 766|Homo sapiens elastin microfibril int... 30 6.3
AB089149-1|BAD11034.1| 766|Homo sapiens hypothetical protein em... 30 6.3
>AJ007714-1|CAA07619.2| 926|Homo sapiens lysine-ketoglutarate
reductase /saccharopine dehydrogenase protein.
Length = 926
Score = 210 bits (513), Expect = 3e-54
Identities = 98/169 (57%), Positives = 124/169 (73%)
Frame = +1
Query: 145 RRVIAIRREDQSVWERRAPFSPSNVKSLVREGVKVIVQPSNRRAYPMQSYINAGAIVQED 324
+ V+A+RRED + WERRAP +P ++K + G KV++QPSNRRA + Y+ AG I+QED
Sbjct: 23 KAVLAVRREDVNAWERRAPLAPKHIKGITNLGYKVLIQPSNRRAIHDKDYVKAGGILQED 82
Query: 325 ISEASVIFGVKQTPIDLLIPNKTYCFFSHTIKAQEANMPMLDAMLAKNIRLIDYEKLMDD 504
ISEA +I GVK+ P + L+ KTY FFSHTIKAQEANM +LD +L + IRLIDYEK++D
Sbjct: 83 ISEACLILGVKRPPEEKLMSRKTYAFFSHTIKAQEANMGLLDEILKQEIRLIDYEKMVDH 142
Query: 505 KGNRVVAFGKYAGVAGMVNIXXXXXXXXXXXXXXTPFMHIGPAHNYRNS 651
+G RVVAFG++AGVAGM+NI TPFMHIG AHNYRNS
Sbjct: 143 RGVRVVAFGQWAGVAGMINILHGMGLRLLALGHHTPFMHIGMAHNYRNS 191
>AF229180-1|AAF44328.1| 926|Homo sapiens alpha-aminoadipate
semialdehyde synthase protein.
Length = 926
Score = 210 bits (513), Expect = 3e-54
Identities = 98/169 (57%), Positives = 124/169 (73%)
Frame = +1
Query: 145 RRVIAIRREDQSVWERRAPFSPSNVKSLVREGVKVIVQPSNRRAYPMQSYINAGAIVQED 324
+ V+A+RRED + WERRAP +P ++K + G KV++QPSNRRA + Y+ AG I+QED
Sbjct: 23 KAVLAVRREDVNAWERRAPLAPKHIKGITNLGYKVLIQPSNRRAIHDKDYVKAGGILQED 82
Query: 325 ISEASVIFGVKQTPIDLLIPNKTYCFFSHTIKAQEANMPMLDAMLAKNIRLIDYEKLMDD 504
ISEA +I GVK+ P + L+ KTY FFSHTIKAQEANM +LD +L + IRLIDYEK++D
Sbjct: 83 ISEACLILGVKRPPEEKLMSRKTYAFFSHTIKAQEANMGLLDEILKQEIRLIDYEKMVDH 142
Query: 505 KGNRVVAFGKYAGVAGMVNIXXXXXXXXXXXXXXTPFMHIGPAHNYRNS 651
+G RVVAFG++AGVAGM+NI TPFMHIG AHNYRNS
Sbjct: 143 RGVRVVAFGQWAGVAGMINILHGMGLRLLALGHHTPFMHIGMAHNYRNS 191
>AC006020-2|AAF03526.1| 926|Homo sapiens lysine ketoglutarate
reductase/saccharopine dehydrogenase protein.
Length = 926
Score = 210 bits (513), Expect = 3e-54
Identities = 98/169 (57%), Positives = 124/169 (73%)
Frame = +1
Query: 145 RRVIAIRREDQSVWERRAPFSPSNVKSLVREGVKVIVQPSNRRAYPMQSYINAGAIVQED 324
+ V+A+RRED + WERRAP +P ++K + G KV++QPSNRRA + Y+ AG I+QED
Sbjct: 23 KAVLAVRREDVNAWERRAPLAPKHIKGITNLGYKVLIQPSNRRAIHDKDYVKAGGILQED 82
Query: 325 ISEASVIFGVKQTPIDLLIPNKTYCFFSHTIKAQEANMPMLDAMLAKNIRLIDYEKLMDD 504
ISEA +I GVK+ P + L+ KTY FFSHTIKAQEANM +LD +L + IRLIDYEK++D
Sbjct: 83 ISEACLILGVKRPPEEKLMSRKTYAFFSHTIKAQEANMGLLDEILKQEIRLIDYEKMVDH 142
Query: 505 KGNRVVAFGKYAGVAGMVNIXXXXXXXXXXXXXXTPFMHIGPAHNYRNS 651
+G RVVAFG++AGVAGM+NI TPFMHIG AHNYRNS
Sbjct: 143 RGVRVVAFGQWAGVAGMINILHGMGLRLLALGHHTPFMHIGMAHNYRNS 191
>L14076-1|AAA36649.1| 494|Homo sapiens pre-mRNA splicing factor
protein.
Length = 494
Score = 31.9 bits (69), Expect = 2.1
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 4/63 (6%)
Frame = +3
Query: 459 GKEHSFNRLREVDGRQGE----SGSRLREVRRSCRNGEHSARTRSEAIGSRTPHSLYAYR 626
G E + ++R V+ + G S SR R RS HS ++RS + S++ HS R
Sbjct: 162 GTEVNGRKIRLVEDKPGSRRRRSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSR 221
Query: 627 SRS 635
SRS
Sbjct: 222 SRS 224
>BT007415-1|AAP36083.1| 494|Homo sapiens splicing factor,
arginine/serine-rich 4 protein.
Length = 494
Score = 31.9 bits (69), Expect = 2.1
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 4/63 (6%)
Frame = +3
Query: 459 GKEHSFNRLREVDGRQGE----SGSRLREVRRSCRNGEHSARTRSEAIGSRTPHSLYAYR 626
G E + ++R V+ + G S SR R RS HS ++RS + S++ HS R
Sbjct: 162 GTEVNGRKIRLVEDKPGSRRRRSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSR 221
Query: 627 SRS 635
SRS
Sbjct: 222 SRS 224
>BC002781-1|AAH02781.1| 494|Homo sapiens splicing factor,
arginine/serine-rich 4 protein.
Length = 494
Score = 31.9 bits (69), Expect = 2.1
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 4/63 (6%)
Frame = +3
Query: 459 GKEHSFNRLREVDGRQGE----SGSRLREVRRSCRNGEHSARTRSEAIGSRTPHSLYAYR 626
G E + ++R V+ + G S SR R RS HS ++RS + S++ HS R
Sbjct: 162 GTEVNGRKIRLVEDKPGSRRRRSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSR 221
Query: 627 SRS 635
SRS
Sbjct: 222 SRS 224
>AL590729-1|CAI14326.1| 494|Homo sapiens splicing factor,
arginine/serine-rich 4 protein.
Length = 494
Score = 31.9 bits (69), Expect = 2.1
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 4/63 (6%)
Frame = +3
Query: 459 GKEHSFNRLREVDGRQGE----SGSRLREVRRSCRNGEHSARTRSEAIGSRTPHSLYAYR 626
G E + ++R V+ + G S SR R RS HS ++RS + S++ HS R
Sbjct: 162 GTEVNGRKIRLVEDKPGSRRRRSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSR 221
Query: 627 SRS 635
SRS
Sbjct: 222 SRS 224
>AL357500-1|CAH71635.1| 494|Homo sapiens splicing factor,
arginine/serine-rich 4 protein.
Length = 494
Score = 31.9 bits (69), Expect = 2.1
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 4/63 (6%)
Frame = +3
Query: 459 GKEHSFNRLREVDGRQGE----SGSRLREVRRSCRNGEHSARTRSEAIGSRTPHSLYAYR 626
G E + ++R V+ + G S SR R RS HS ++RS + S++ HS R
Sbjct: 162 GTEVNGRKIRLVEDKPGSRRRRSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSR 221
Query: 627 SRS 635
SRS
Sbjct: 222 SRS 224
>AK223444-1|BAD97164.1| 382|Homo sapiens splicing factor,
arginine/serine-rich 4 variant protein.
Length = 382
Score = 31.9 bits (69), Expect = 2.1
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 4/63 (6%)
Frame = +3
Query: 459 GKEHSFNRLREVDGRQGE----SGSRLREVRRSCRNGEHSARTRSEAIGSRTPHSLYAYR 626
G E + ++R V+ + G S SR R RS HS ++RS + S++ HS R
Sbjct: 162 GTEVNGRKIRLVEDKPGSRRRRSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSR 221
Query: 627 SRS 635
SRS
Sbjct: 222 SRS 224
>AB209856-1|BAD93093.1| 419|Homo sapiens splicing factor,
arginine/serine-rich 4 variant protein.
Length = 419
Score = 31.9 bits (69), Expect = 2.1
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 4/63 (6%)
Frame = +3
Query: 459 GKEHSFNRLREVDGRQGE----SGSRLREVRRSCRNGEHSARTRSEAIGSRTPHSLYAYR 626
G E + ++R V+ + G S SR R RS HS ++RS + S++ HS R
Sbjct: 87 GTEVNGRKIRLVEDKPGSRRRRSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSR 146
Query: 627 SRS 635
SRS
Sbjct: 147 SRS 149
>BC101045-1|AAI01046.1| 766|Homo sapiens elastin microfibril
interfacer 3 protein.
Length = 766
Score = 30.3 bits (65), Expect = 6.3
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = +3
Query: 486 REVDGRQGESGSRLREVRRSCRNGEHSARTRSEAIGSR 599
+++ G Q E R++EVRR C G+ ++R +++ R
Sbjct: 321 QKLQGVQSECDLRVQEVRRQCEEGQAASRRLHQSLDGR 358
>BC101044-1|AAI01045.1| 766|Homo sapiens elastin microfibril
interfacer 3 protein.
Length = 766
Score = 30.3 bits (65), Expect = 6.3
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = +3
Query: 486 REVDGRQGESGSRLREVRRSCRNGEHSARTRSEAIGSR 599
+++ G Q E R++EVRR C G+ ++R +++ R
Sbjct: 321 QKLQGVQSECDLRVQEVRRQCEEGQAASRRLHQSLDGR 358
>BC101043-1|AAI01044.1| 766|Homo sapiens elastin microfibril
interfacer 3 protein.
Length = 766
Score = 30.3 bits (65), Expect = 6.3
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = +3
Query: 486 REVDGRQGESGSRLREVRRSCRNGEHSARTRSEAIGSR 599
+++ G Q E R++EVRR C G+ ++R +++ R
Sbjct: 321 QKLQGVQSECDLRVQEVRRQCEEGQAASRRLHQSLDGR 358
>AL031667-1|CAI42976.1| 766|Homo sapiens elastin microfibril
interfacer 3 protein.
Length = 766
Score = 30.3 bits (65), Expect = 6.3
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = +3
Query: 486 REVDGRQGESGSRLREVRRSCRNGEHSARTRSEAIGSR 599
+++ G Q E R++EVRR C G+ ++R +++ R
Sbjct: 321 QKLQGVQSECDLRVQEVRRQCEEGQAASRRLHQSLDGR 358
>AB089149-1|BAD11034.1| 766|Homo sapiens hypothetical protein
emilin like chromosome 20 open reading frame 130
protein.
Length = 766
Score = 30.3 bits (65), Expect = 6.3
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = +3
Query: 486 REVDGRQGESGSRLREVRRSCRNGEHSARTRSEAIGSR 599
+++ G Q E R++EVRR C G+ ++R +++ R
Sbjct: 321 QKLQGVQSECDLRVQEVRRQCEEGQAASRRLHQSLDGR 358
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,941,849
Number of Sequences: 237096
Number of extensions: 1965691
Number of successful extensions: 4146
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 3978
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4146
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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