Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV13k13f
(643 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC024244-1|AAH24244.1| 355|Homo sapiens splA/ryanodine receptor... 116 7e-26
BC007588-1|AAH07588.2| 355|Homo sapiens splA/ryanodine receptor... 116 7e-26
AF403028-1|AAL57347.1| 355|Homo sapiens SPRY domain-containing ... 116 7e-26
BC047441-1|AAH47441.2| 355|Homo sapiens splA/ryanodine receptor... 114 3e-25
BC041897-1|AAH41897.1| 227|Homo sapiens SPSB3 protein protein. 92 1e-18
AE006639-7|AAK61293.1| 191|Homo sapiens JFP13 protein. 58 4e-08
AK057850-1|BAB71594.1| 159|Homo sapiens protein ( Homo sapiens ... 36 0.12
BC008324-1|AAH08324.1| 273|Homo sapiens splA/ryanodine receptor... 33 0.65
AK056367-1|BAB71165.1| 273|Homo sapiens protein ( Homo sapiens ... 33 0.65
AF403029-1|AAL57348.1| 273|Homo sapiens SPRY domain-containing ... 33 0.65
BC031303-1|AAH31303.1| 183|Homo sapiens ankyrin repeat domain 3... 30 6.1
AC092636-4|AAY14966.1| 183|Homo sapiens unknown protein. 30 6.1
AB209367-1|BAD92604.1| 192|Homo sapiens hypothetical protein MG... 30 6.1
BC114469-1|AAI14470.1| 468|Homo sapiens tripartite motif family... 30 8.0
BC113860-1|AAI13861.1| 468|Homo sapiens tripartite motif family... 30 8.0
AK093499-1|BAC04185.1| 468|Homo sapiens protein ( Homo sapiens ... 30 8.0
>BC024244-1|AAH24244.1| 355|Homo sapiens splA/ryanodine receptor
domain and SOCS box containing 3 protein.
Length = 355
Score = 116 bits (279), Expect = 7e-26
Identities = 56/131 (42%), Positives = 83/131 (63%)
Frame = +3
Query: 249 CTCGEEQNLKEWSWERPPYVGSSWLVLTNDLKQVTFHPFYSSGTAVVRGNCPMIHNYHYY 428
C CGEE +W W+ SS +L+ D ++V+FH YS GTA +RG + H+
Sbjct: 94 CRCGEEDEYFDWVWD--DLNKSSATLLSCDNRKVSFHMEYSCGTAAIRGTKELGEGQHF- 150
Query: 429 WEIKMLTDTYGTDILIGVGSNKVNISDPQFTFTSLIGQDEESYGLSYTGAVRHNSKVTRD 608
WEIKM + YGTD+++G+G++ V++ + TF SL+G+DE+S+GLSYTG + H T
Sbjct: 151 WEIKMTSPVYGTDMMVGIGTSDVDLDKYRHTFCSLLGRDEDSWGLSYTGLLHHKGDKTSF 210
Query: 609 SVGFCRGTIIG 641
S F +G+IIG
Sbjct: 211 SSRFGQGSIIG 221
>BC007588-1|AAH07588.2| 355|Homo sapiens splA/ryanodine receptor
domain and SOCS box containing 3 protein.
Length = 355
Score = 116 bits (279), Expect = 7e-26
Identities = 56/131 (42%), Positives = 83/131 (63%)
Frame = +3
Query: 249 CTCGEEQNLKEWSWERPPYVGSSWLVLTNDLKQVTFHPFYSSGTAVVRGNCPMIHNYHYY 428
C CGEE +W W+ SS +L+ D ++V+FH YS GTA +RG + H+
Sbjct: 94 CRCGEEDEYFDWVWD--DLNKSSATLLSCDNRKVSFHMEYSCGTAAIRGTKELGEGQHF- 150
Query: 429 WEIKMLTDTYGTDILIGVGSNKVNISDPQFTFTSLIGQDEESYGLSYTGAVRHNSKVTRD 608
WEIKM + YGTD+++G+G++ V++ + TF SL+G+DE+S+GLSYTG + H T
Sbjct: 151 WEIKMTSPVYGTDMMVGIGTSDVDLDKYRHTFCSLLGRDEDSWGLSYTGLLHHKGDKTSF 210
Query: 609 SVGFCRGTIIG 641
S F +G+IIG
Sbjct: 211 SSRFGQGSIIG 221
>AF403028-1|AAL57347.1| 355|Homo sapiens SPRY domain-containing
SOCS box protein SSB-3 protein.
Length = 355
Score = 116 bits (279), Expect = 7e-26
Identities = 56/131 (42%), Positives = 83/131 (63%)
Frame = +3
Query: 249 CTCGEEQNLKEWSWERPPYVGSSWLVLTNDLKQVTFHPFYSSGTAVVRGNCPMIHNYHYY 428
C CGEE +W W+ SS +L+ D ++V+FH YS GTA +RG + H+
Sbjct: 94 CRCGEEDEYFDWVWD--DLNKSSATLLSCDNRKVSFHMEYSCGTAAIRGTKELGEGQHF- 150
Query: 429 WEIKMLTDTYGTDILIGVGSNKVNISDPQFTFTSLIGQDEESYGLSYTGAVRHNSKVTRD 608
WEIKM + YGTD+++G+G++ V++ + TF SL+G+DE+S+GLSYTG + H T
Sbjct: 151 WEIKMTSPVYGTDMMVGIGTSDVDLDKYRHTFCSLLGRDEDSWGLSYTGLLHHKGDKTSF 210
Query: 609 SVGFCRGTIIG 641
S F +G+IIG
Sbjct: 211 SSRFGQGSIIG 221
>BC047441-1|AAH47441.2| 355|Homo sapiens splA/ryanodine receptor
domain and SOCS box containing 3 protein.
Length = 355
Score = 114 bits (274), Expect = 3e-25
Identities = 55/131 (41%), Positives = 82/131 (62%)
Frame = +3
Query: 249 CTCGEEQNLKEWSWERPPYVGSSWLVLTNDLKQVTFHPFYSSGTAVVRGNCPMIHNYHYY 428
C CGEE +W W+ SS +L+ D ++V+FH YS GTA +RG + H+
Sbjct: 94 CRCGEEDEYFDWVWD--DLNKSSATLLSCDNRKVSFHMEYSCGTAAIRGTKELGEGQHF- 150
Query: 429 WEIKMLTDTYGTDILIGVGSNKVNISDPQFTFTSLIGQDEESYGLSYTGAVRHNSKVTRD 608
WEIKM + YGTD+++G+G++ V++ + TF SL+G+DE+S+GLSYTG + H T
Sbjct: 151 WEIKMTSPVYGTDMMVGIGTSDVDLDKYRHTFCSLLGRDEDSWGLSYTGLLHHKGDKTSF 210
Query: 609 SVGFCRGTIIG 641
F +G+IIG
Sbjct: 211 PSRFGQGSIIG 221
>BC041897-1|AAH41897.1| 227|Homo sapiens SPSB3 protein protein.
Length = 227
Score = 92.3 bits (219), Expect = 1e-18
Identities = 42/92 (45%), Positives = 62/92 (67%)
Frame = +3
Query: 366 YSSGTAVVRGNCPMIHNYHYYWEIKMLTDTYGTDILIGVGSNKVNISDPQFTFTSLIGQD 545
YS GTA +RG + H+ WEIKM + YGTD+++G+G++ V++ + TF SL+G+D
Sbjct: 3 YSCGTAAIRGTKELGEGQHF-WEIKMTSPVYGTDMMVGIGTSDVDLDKYRHTFCSLLGRD 61
Query: 546 EESYGLSYTGAVRHNSKVTRDSVGFCRGTIIG 641
E+S+GLSYTG + H T S F +G+IIG
Sbjct: 62 EDSWGLSYTGLLHHKGDKTSFSSRFGQGSIIG 93
>AE006639-7|AAK61293.1| 191|Homo sapiens JFP13 protein.
Length = 191
Score = 57.6 bits (133), Expect = 4e-08
Identities = 25/57 (43%), Positives = 40/57 (70%)
Frame = +3
Query: 471 LIGVGSNKVNISDPQFTFTSLIGQDEESYGLSYTGAVRHNSKVTRDSVGFCRGTIIG 641
++G+G++ V++ + TF SL+G+DE+S+GLSYTG + H T S F +G+IIG
Sbjct: 1 MVGIGTSDVDLDKYRHTFCSLLGRDEDSWGLSYTGLLHHKGDKTSFSSRFGQGSIIG 57
>AK057850-1|BAB71594.1| 159|Homo sapiens protein ( Homo sapiens
cDNA FLJ25121 fis, clone CBR06051. ).
Length = 159
Score = 35.9 bits (79), Expect = 0.12
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +3
Query: 366 YSSGTAVVRGNCPMIHNYHYYWEIKMLTDTYGT 464
YS GTA +RG + H+ WEIKM + YGT
Sbjct: 3 YSCGTAAIRGTKELGEGQHF-WEIKMTSPVYGT 34
>BC008324-1|AAH08324.1| 273|Homo sapiens splA/ryanodine receptor
domain and SOCS box containing 4 protein.
Length = 273
Score = 33.5 bits (73), Expect = 0.65
Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Frame = +3
Query: 324 VLTNDLKQVTFHPF-YSSGTAVVRGNCPMIHNYHYYWEIKMLTDTYGTDILIGVGSNKVN 500
V D ++TFH + T +RG H W+I GT ++GV + +
Sbjct: 65 VFVKDDDRLTFHRHPVAQSTDGIRGKVGHARGLHA-WQINWPARQRGTHAVVGVATARAP 123
Query: 501 ISDPQFTFTSLIGQDEESYG 560
+ +T+L+G D ES+G
Sbjct: 124 LHS--VGYTALVGSDAESWG 141
>AK056367-1|BAB71165.1| 273|Homo sapiens protein ( Homo sapiens
cDNA FLJ31805 fis, clone NT2RI2009144. ).
Length = 273
Score = 33.5 bits (73), Expect = 0.65
Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Frame = +3
Query: 324 VLTNDLKQVTFHPF-YSSGTAVVRGNCPMIHNYHYYWEIKMLTDTYGTDILIGVGSNKVN 500
V D ++TFH + T +RG H W+I GT ++GV + +
Sbjct: 65 VFVKDDDRLTFHRHPVAQSTDGIRGKVGHARGLHA-WQINWPARQRGTHAVVGVATARAP 123
Query: 501 ISDPQFTFTSLIGQDEESYG 560
+ +T+L+G D ES+G
Sbjct: 124 LHS--VGYTALVGSDAESWG 141
>AF403029-1|AAL57348.1| 273|Homo sapiens SPRY domain-containing
SOCS box protein SSB-4 protein.
Length = 273
Score = 33.5 bits (73), Expect = 0.65
Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Frame = +3
Query: 324 VLTNDLKQVTFHPF-YSSGTAVVRGNCPMIHNYHYYWEIKMLTDTYGTDILIGVGSNKVN 500
V D ++TFH + T +RG H W+I GT ++GV + +
Sbjct: 65 VFVKDDDRLTFHRHPVAQSTDGIRGKVGHARGLHA-WQINWPARQRGTHAVVGVATARAP 123
Query: 501 ISDPQFTFTSLIGQDEESYG 560
+ +T+L+G D ES+G
Sbjct: 124 LHS--VGYTALVGSDAESWG 141
>BC031303-1|AAH31303.1| 183|Homo sapiens ankyrin repeat domain 39
protein.
Length = 183
Score = 30.3 bits (65), Expect = 6.1
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = -1
Query: 307 TYGGLSQLHSFKFCSSPHVQRFRFFQGTGPDLLDQHG 197
T+GG + LH +C + R G+ P ++D G
Sbjct: 94 THGGATALHRASYCGHTEITRLLLSHGSNPRVVDDDG 130
>AC092636-4|AAY14966.1| 183|Homo sapiens unknown protein.
Length = 183
Score = 30.3 bits (65), Expect = 6.1
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = -1
Query: 307 TYGGLSQLHSFKFCSSPHVQRFRFFQGTGPDLLDQHG 197
T+GG + LH +C + R G+ P ++D G
Sbjct: 94 THGGATALHRASYCGHTEIARLLLSHGSNPRVVDDDG 130
>AB209367-1|BAD92604.1| 192|Homo sapiens hypothetical protein
MGC41816 variant protein.
Length = 192
Score = 30.3 bits (65), Expect = 6.1
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = -1
Query: 307 TYGGLSQLHSFKFCSSPHVQRFRFFQGTGPDLLDQHG 197
T+GG + LH +C + R G+ P ++D G
Sbjct: 103 THGGATALHRASYCGHTEIARLLLSHGSNPRVVDDDG 139
>BC114469-1|AAI14470.1| 468|Homo sapiens tripartite motif
family-like 1 protein.
Length = 468
Score = 29.9 bits (64), Expect = 8.0
Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 13/113 (11%)
Frame = +3
Query: 240 LNLCTC-GEEQNLKEWSWE--RPPYVGSSWLVLTNDLKQVTF---------HPFYSSGTA 383
L+LC G ++ L+++S E P +++LVL+ DLK V + +P +A
Sbjct: 269 LSLCRITGMKEMLRKFSTEITLDPATANAYLVLSEDLKSVKYGGSRQQLPDNPERFDQSA 328
Query: 384 VVRGNCPMIHNYHYYWEIKMLTDT-YGTDILIGVGSNKVNISDPQFTFTSLIG 539
V G + + +YWE+++ T + I S K N+ P SLIG
Sbjct: 329 TVLGT-QIFTSGRHYWEVEVGNKTEWEVGICKDSVSRKGNLPKPPGDLFSLIG 380
>BC113860-1|AAI13861.1| 468|Homo sapiens tripartite motif
family-like 1 protein.
Length = 468
Score = 29.9 bits (64), Expect = 8.0
Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 13/113 (11%)
Frame = +3
Query: 240 LNLCTC-GEEQNLKEWSWE--RPPYVGSSWLVLTNDLKQVTF---------HPFYSSGTA 383
L+LC G ++ L+++S E P +++LVL+ DLK V + +P +A
Sbjct: 269 LSLCRITGMKEMLRKFSTEITLDPATANAYLVLSEDLKSVKYGGSRQQLPDNPERFDQSA 328
Query: 384 VVRGNCPMIHNYHYYWEIKMLTDT-YGTDILIGVGSNKVNISDPQFTFTSLIG 539
V G + + +YWE+++ T + I S K N+ P SLIG
Sbjct: 329 TVLGT-QIFTSGRHYWEVEVGNKTEWEVGICKDSVSRKGNLPKPPGDLFSLIG 380
>AK093499-1|BAC04185.1| 468|Homo sapiens protein ( Homo sapiens
cDNA FLJ36180 fis, clone TESTI2026605, weakly similar to
52 KDA RO PROTEIN. ).
Length = 468
Score = 29.9 bits (64), Expect = 8.0
Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 13/113 (11%)
Frame = +3
Query: 240 LNLCTC-GEEQNLKEWSWE--RPPYVGSSWLVLTNDLKQVTF---------HPFYSSGTA 383
L+LC G ++ L+++S E P +++LVL+ DLK V + +P +A
Sbjct: 269 LSLCRITGMKEMLRKFSTEITLDPATANAYLVLSEDLKSVKYGGSRQQLPDNPERFDQSA 328
Query: 384 VVRGNCPMIHNYHYYWEIKMLTDT-YGTDILIGVGSNKVNISDPQFTFTSLIG 539
V G + + +YWE+++ T + I S K N+ P SLIG
Sbjct: 329 TVLGT-QIFTSGRHYWEVEVGNKTEWEVGICKDSVSRKGNLPKPPGDLFSLIG 380
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,282,599
Number of Sequences: 237096
Number of extensions: 2019843
Number of successful extensions: 7795
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 7688
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7785
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7085195460
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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