Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV13k01f
         (656 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    24   1.1  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    23   1.9  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    23   1.9  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   1.9  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    23   2.6  
U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodops...    21   7.8  
AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter...    21   7.8  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   7.8  

>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -2

Query: 352 AWSGPRPSPLTGARKTYG 299
           A    +PSP+TGA K++G
Sbjct: 357 AQKSQKPSPVTGASKSHG 374


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 13/44 (29%), Positives = 20/44 (45%)
 Frame = +1

Query: 289 IRSFRTSCVRRSAEKVEDHSRLWVIERVVSAALVPLIPLALMMP 420
           +RS + SC+ R A + +    L V+     A  +P   L L  P
Sbjct: 287 VRSHQQSCINRVARETKTAGTLAVVVGGFVACWLPFFILYLATP 330


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = -1

Query: 362 MTQSLEWSSTFSADRRTQDVRNERIAFNMGVVLVSFIIFLT-GNELE 225
           M+ SL+WSST + D   +      I  ++    +S II +  G++LE
Sbjct: 490 MSSSLQWSSTHTLDVAWRRKVTIEILNSLSATKLSKIILMQFGDKLE 536


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = -1

Query: 362 MTQSLEWSSTFSADRRTQDVRNERIAFNMGVVLVSFIIFLT-GNELE 225
           M+ SL+WSST + D   +      I  ++    +S II +  G++LE
Sbjct: 528 MSSSLQWSSTHTLDVAWRRKVTIEILNSLSATKLSKIILMQFGDKLE 574


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = +3

Query: 378 CCTGPIDSVSPHDAEQTIRLSPG 446
           CC    D + P+  +  IR+ PG
Sbjct: 446 CCFAQDDGLCPYTLKHKIRVPPG 468


>U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodopsin
           protein.
          Length = 377

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 9/46 (19%), Positives = 20/46 (43%)
 Frame = -1

Query: 314 TQDVRNERIAFNMGVVLVSFIIFLTGNELEIIRCVIAGWVASLIAC 177
           T+ +R     F + + + +F++    +   +I C    WV   + C
Sbjct: 80  TKSLRTPSNLFVINLAISNFLMMFCMSPPMVINCYYETWVLGPLFC 125


>AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter
           Am-EAAT protein.
          Length = 543

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 14/66 (21%), Positives = 33/66 (50%)
 Frame = +1

Query: 376 SAALVPLIPLALMMPNKLFDSLLAILITAHSFWGLEAIAVDYVRASIFGPILPKIAIGLV 555
           SAA +P+    L   NK+   +   ++   +   ++  A+    A+IF   +  I++G+ 
Sbjct: 363 SAATLPITFRCLEENNKIDSRVTRFVVAVGATVNMDGTALYEAVAAIFIAQMNGISLGIG 422

Query: 556 YLISIA 573
            +I+++
Sbjct: 423 EVITVS 428


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 12/54 (22%), Positives = 24/54 (44%)
 Frame = -1

Query: 527 IGPNILART*STAIASRPQKL*AVISIARRESNSLFGIMRANGINGTSAAETTL 366
           +G   L+      I + PQ +   +S     + +   + R   ++G S++ TTL
Sbjct: 684 LGSEALSAATVRFIEAEPQPIGKALSKCHNRNVTTCNMFRKTNLSGDSSSGTTL 737


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,471
Number of Sequences: 438
Number of extensions: 4465
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19734030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)