Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV13j09r
         (725 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y14391-1|CAA74749.2|  403|Homo sapiens GTP-binding protein protein.    31   3.2  
BX000483-1|CAI41972.1|  286|Homo sapiens GTP binding protein 6 (...    31   3.2  
BT007360-1|AAP36024.1|  403|Homo sapiens Pseudoautosomal GTP-bin...    31   3.2  
BC014636-1|AAH14636.1|  403|Homo sapiens pseudoautosomal GTP-bin...    31   3.2  
AK223412-1|BAD97132.1|  403|Homo sapiens pseudoautosomal GTP-bin...    31   3.2  

>Y14391-1|CAA74749.2|  403|Homo sapiens GTP-binding protein protein.
          Length = 403

 Score = 31.5 bits (68), Expect = 3.2
 Identities = 25/83 (30%), Positives = 38/83 (45%)
 Frame = -2

Query: 520 SWLTFSYQPHFHFVS*HVHTIPNAHFSASLSQVPLSDFL*HIRSVFYPFSLLHTSIATFA 341
           S +T  Y     F+S   H +  + FSA+L  V  SD + H+R V +P + L     +  
Sbjct: 228 SRMTVLYVDTIGFLSQLPHGLIES-FSATLEDVAHSDLILHVRDVSHPEAELQK--CSVL 284

Query: 340 SLLHAIAFHQPL*RSNKPIHTKI 272
           S L  +    PL  S   +H K+
Sbjct: 285 STLRGLQLPAPLLDSMVEVHNKV 307


>BX000483-1|CAI41972.1|  286|Homo sapiens GTP binding protein 6
           (putative) protein.
          Length = 286

 Score = 31.5 bits (68), Expect = 3.2
 Identities = 25/83 (30%), Positives = 38/83 (45%)
 Frame = -2

Query: 520 SWLTFSYQPHFHFVS*HVHTIPNAHFSASLSQVPLSDFL*HIRSVFYPFSLLHTSIATFA 341
           S +T  Y     F+S   H +  + FSA+L  V  SD + H+R V +P + L     +  
Sbjct: 111 SRMTVLYVDTIGFLSQLPHGLIES-FSATLEDVAHSDLILHVRDVSHPEAELQK--CSVL 167

Query: 340 SLLHAIAFHQPL*RSNKPIHTKI 272
           S L  +    PL  S   +H K+
Sbjct: 168 STLRGLQLPAPLLDSMVEVHNKV 190


>BT007360-1|AAP36024.1|  403|Homo sapiens Pseudoautosomal
           GTP-binding protein-like protein.
          Length = 403

 Score = 31.5 bits (68), Expect = 3.2
 Identities = 25/83 (30%), Positives = 38/83 (45%)
 Frame = -2

Query: 520 SWLTFSYQPHFHFVS*HVHTIPNAHFSASLSQVPLSDFL*HIRSVFYPFSLLHTSIATFA 341
           S +T  Y     F+S   H +  + FSA+L  V  SD + H+R V +P + L     +  
Sbjct: 228 SRMTVLYVDTIGFLSQLPHGLIES-FSATLEDVAHSDLILHVRDVSHPEAELQK--CSVL 284

Query: 340 SLLHAIAFHQPL*RSNKPIHTKI 272
           S L  +    PL  S   +H K+
Sbjct: 285 STLRGLQLPAPLLDSMVEVHNKV 307


>BC014636-1|AAH14636.1|  403|Homo sapiens pseudoautosomal
           GTP-binding protein-like protein protein.
          Length = 403

 Score = 31.5 bits (68), Expect = 3.2
 Identities = 25/83 (30%), Positives = 38/83 (45%)
 Frame = -2

Query: 520 SWLTFSYQPHFHFVS*HVHTIPNAHFSASLSQVPLSDFL*HIRSVFYPFSLLHTSIATFA 341
           S +T  Y     F+S   H +  + FSA+L  V  SD + H+R V +P + L     +  
Sbjct: 228 SRMTVLYVDTIGFLSQLPHGLIES-FSATLEDVAHSDLILHVRDVSHPEAELQK--CSVL 284

Query: 340 SLLHAIAFHQPL*RSNKPIHTKI 272
           S L  +    PL  S   +H K+
Sbjct: 285 STLRGLQLPAPLLDSMVEVHNKV 307


>AK223412-1|BAD97132.1|  403|Homo sapiens pseudoautosomal
           GTP-binding protein-like protein variant protein.
          Length = 403

 Score = 31.5 bits (68), Expect = 3.2
 Identities = 25/83 (30%), Positives = 38/83 (45%)
 Frame = -2

Query: 520 SWLTFSYQPHFHFVS*HVHTIPNAHFSASLSQVPLSDFL*HIRSVFYPFSLLHTSIATFA 341
           S +T  Y     F+S   H +  + FSA+L  V  SD + H+R V +P + L     +  
Sbjct: 228 SRMTVLYVDTIGFLSQLPHGLIES-FSATLEDVAHSDLILHVRDVSHPEAELQK--CSVL 284

Query: 340 SLLHAIAFHQPL*RSNKPIHTKI 272
           S L  +    PL  S   +H K+
Sbjct: 285 STLRGLQLPAPLLDSMVEVHNKV 307


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,874,660
Number of Sequences: 237096
Number of extensions: 2000372
Number of successful extensions: 3365
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3221
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3365
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8567175942
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)