Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV13j09f
         (652 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC127863-1|AAI27864.1|  232|Homo sapiens CLRN2 protein protein.        39   0.013
AB067279-1|BAC02316.1|  120|Homo sapiens immunoglobulin heavy ch...    33   1.2  
BC051824-1|AAH51824.1| 1122|Homo sapiens histone deacetylase 5 p...    32   1.5  
AF132608-1|AAD29047.1| 1122|Homo sapiens histone deacetylase 5 p...    32   1.5  
AF039691-1|AAC18040.1|  897|Homo sapiens antigen NY-CO-9 protein.      32   1.5  
AB177853-1|BAD66831.1|  716|Homo sapiens KIAA0600 splice variant...    32   1.5  
AB011172-1|BAA25526.2| 1080|Homo sapiens KIAA0600 protein protein.     32   1.5  
BC112203-1|AAI12204.1|  311|Homo sapiens MAS-related GPR, member...    31   4.7  
BC104889-1|AAI04890.1|  311|Homo sapiens MAS-related GPR, member...    31   4.7  
AB037821-1|BAA92638.1| 1093|Homo sapiens KIAA1400 protein protein.     30   8.2  

>BC127863-1|AAI27864.1|  232|Homo sapiens CLRN2 protein protein.
          Length = 232

 Score = 39.1 bits (87), Expect = 0.013
 Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
 Frame = +3

Query: 402 LSYAVYIAVIVVLFVQLAFGLVAASLAILNATKNPTEPIFGLPG-CLWANVLTALLGSIV 578
           L+  +++ ++++LF+ LA  LV+   AILN  + P   + G  G CLW NVL    G +V
Sbjct: 93  LNAGLHVMILLLLFLALALALVSMGFAILNMIQVPYRAVSGPGGICLW-NVLA---GGVV 148

Query: 579 LLIFGIYWLVSGLKDH 626
            L    +  V+ +K H
Sbjct: 149 ALAIASF--VAAVKFH 162


>AB067279-1|BAC02316.1|  120|Homo sapiens immunoglobulin heavy chain
           VHDJ region protein.
          Length = 120

 Score = 32.7 bits (71), Expect = 1.2
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = +2

Query: 14  CSQHGGYETCIHFWGIPTQCTVS 82
           C++H  Y+T IH+WG  T  TVS
Sbjct: 97  CARHDHYDTSIHYWGQGTLVTVS 119


>BC051824-1|AAH51824.1| 1122|Homo sapiens histone deacetylase 5
           protein.
          Length = 1122

 Score = 32.3 bits (70), Expect = 1.5
 Identities = 22/73 (30%), Positives = 33/73 (45%)
 Frame = -2

Query: 630 PDGPSSLTPASICRRSAKQSSQVVQLRHLPKDTLVTRRSVRWGSSLRSKWPERQPLSRKR 451
           P G +SL    +    A+Q S ++ +    +  LVT   V        K P  +PLSR +
Sbjct: 438 PHGHASLLQHVLLLEQARQQSTLIAVPLHGQSPLVTGERVATSMRTVGKLPRHRPLSRTQ 497

Query: 450 AERTIPQ*PQCRQ 412
           +   +PQ PQ  Q
Sbjct: 498 SS-PLPQSPQALQ 509


>AF132608-1|AAD29047.1| 1122|Homo sapiens histone deacetylase 5
           protein.
          Length = 1122

 Score = 32.3 bits (70), Expect = 1.5
 Identities = 22/73 (30%), Positives = 33/73 (45%)
 Frame = -2

Query: 630 PDGPSSLTPASICRRSAKQSSQVVQLRHLPKDTLVTRRSVRWGSSLRSKWPERQPLSRKR 451
           P G +SL    +    A+Q S ++ +    +  LVT   V        K P  +PLSR +
Sbjct: 438 PHGHASLLQHVLLLEQARQQSTLIAVPLHGQSPLVTGERVATSMRTVGKLPRHRPLSRTQ 497

Query: 450 AERTIPQ*PQCRQ 412
           +   +PQ PQ  Q
Sbjct: 498 SS-PLPQSPQALQ 509


>AF039691-1|AAC18040.1|  897|Homo sapiens antigen NY-CO-9 protein.
          Length = 897

 Score = 32.3 bits (70), Expect = 1.5
 Identities = 22/73 (30%), Positives = 33/73 (45%)
 Frame = -2

Query: 630 PDGPSSLTPASICRRSAKQSSQVVQLRHLPKDTLVTRRSVRWGSSLRSKWPERQPLSRKR 451
           P G +SL    +    A+Q S ++ +    +  LVT   V        K P  +PLSR +
Sbjct: 250 PHGHASLLQHVLLLEQARQQSTLIAVPLHGQSPLVTGERVATSMRTVGKLPRHRPLSRTQ 309

Query: 450 AERTIPQ*PQCRQ 412
           +   +PQ PQ  Q
Sbjct: 310 SS-PLPQSPQALQ 321


>AB177853-1|BAD66831.1|  716|Homo sapiens KIAA0600 splice variant 1
           protein.
          Length = 716

 Score = 32.3 bits (70), Expect = 1.5
 Identities = 22/73 (30%), Positives = 33/73 (45%)
 Frame = -2

Query: 630 PDGPSSLTPASICRRSAKQSSQVVQLRHLPKDTLVTRRSVRWGSSLRSKWPERQPLSRKR 451
           P G +SL    +    A+Q S ++ +    +  LVT   V        K P  +PLSR +
Sbjct: 32  PHGHASLLQHVLLLEQARQQSTLIAVPLHGQSPLVTGERVATSMRTVGKLPRHRPLSRTQ 91

Query: 450 AERTIPQ*PQCRQ 412
           +   +PQ PQ  Q
Sbjct: 92  SS-PLPQSPQALQ 103


>AB011172-1|BAA25526.2| 1080|Homo sapiens KIAA0600 protein protein.
          Length = 1080

 Score = 32.3 bits (70), Expect = 1.5
 Identities = 22/73 (30%), Positives = 33/73 (45%)
 Frame = -2

Query: 630 PDGPSSLTPASICRRSAKQSSQVVQLRHLPKDTLVTRRSVRWGSSLRSKWPERQPLSRKR 451
           P G +SL    +    A+Q S ++ +    +  LVT   V        K P  +PLSR +
Sbjct: 481 PHGHASLLQHVLLLEQARQQSTLIAVPLHGQSPLVTGERVATSMRTVGKLPRHRPLSRTQ 540

Query: 450 AERTIPQ*PQCRQ 412
           +   +PQ PQ  Q
Sbjct: 541 SS-PLPQSPQALQ 552


>BC112203-1|AAI12204.1|  311|Homo sapiens MAS-related GPR, member E
           protein.
          Length = 311

 Score = 30.7 bits (66), Expect = 4.7
 Identities = 25/66 (37%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
 Frame = +3

Query: 426 VIVVLFVQLAFGLVAASLAIL-NATKNPTEPI-FGLPGCLWANVLTALLGSIVLLIFGIY 599
           V  VL   L   +  ASL +L    + P  P   G PG +   +LT LL     L FGIY
Sbjct: 179 VAAVLLALLCCTMCGASLMLLLRVERGPQRPPPRGFPGLI---LLTVLLFLFCGLPFGIY 235

Query: 600 WLVSGL 617
           WL   L
Sbjct: 236 WLSRNL 241


>BC104889-1|AAI04890.1|  311|Homo sapiens MAS-related GPR, member E
           protein.
          Length = 311

 Score = 30.7 bits (66), Expect = 4.7
 Identities = 25/66 (37%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
 Frame = +3

Query: 426 VIVVLFVQLAFGLVAASLAIL-NATKNPTEPI-FGLPGCLWANVLTALLGSIVLLIFGIY 599
           V  VL   L   +  ASL +L    + P  P   G PG +   +LT LL     L FGIY
Sbjct: 179 VAAVLLALLCCTMCGASLMLLLRVERGPQRPPPRGFPGLI---LLTVLLFLFCGLPFGIY 235

Query: 600 WLVSGL 617
           WL   L
Sbjct: 236 WLSRNL 241


>AB037821-1|BAA92638.1| 1093|Homo sapiens KIAA1400 protein protein.
          Length = 1093

 Score = 29.9 bits (64), Expect = 8.2
 Identities = 17/40 (42%), Positives = 22/40 (55%)
 Frame = +3

Query: 510 EPIFGLPGCLWANVLTALLGSIVLLIFGIYWLVSGLKDHL 629
           E I  L GC    +L  LL  IVLL+F + W+V G+   L
Sbjct: 36  EVIGWLTGC--GKLLPFLLEMIVLLLFALLWMVEGVFSQL 73


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,720,472
Number of Sequences: 237096
Number of extensions: 2371344
Number of successful extensions: 5635
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5412
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5625
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)