Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV13j07r
         (745 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    26   0.32 
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   7.0  
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    21   9.2  
DQ325109-1|ABD14123.1|  177|Apis mellifera complementary sex det...    21   9.2  
DQ325108-1|ABD14122.1|  177|Apis mellifera complementary sex det...    21   9.2  
DQ325107-1|ABD14121.1|  176|Apis mellifera complementary sex det...    21   9.2  
DQ325106-1|ABD14120.1|  177|Apis mellifera complementary sex det...    21   9.2  
AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex det...    21   9.2  

>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 26.2 bits (55), Expect = 0.32
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = +2

Query: 77  KNSF*ITLIDLKYVTNFVKKK 139
           K +F IT+ DL ++TN  KKK
Sbjct: 379 KRNFFITMFDLDFLTNACKKK 399


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -2

Query: 546 LQWNKNGITVVPDEHTIAEIMYR 478
           L+W KN + VV  E    E+M R
Sbjct: 21  LRWTKNMVFVVGLERVAEELMGR 43


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -2

Query: 531 NGITVVPDEHTIAEIMYRFSDHILHKISA 445
           N +  + DE     IMY+ SD   H++++
Sbjct: 203 NTMVYIADEKGEGLIMYQNSDDSFHRLTS 231


>DQ325109-1|ABD14123.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 9/29 (31%), Positives = 18/29 (62%)
 Frame = +1

Query: 130 KEKKIVWNFNSLKLNLQNILYSQLQYTHL 216
           KE KI+ + ++  ++  N  Y +LQY ++
Sbjct: 77  KEPKIISSLSNKTIHNNNNNYKKLQYYNI 105


>DQ325108-1|ABD14122.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 9/29 (31%), Positives = 18/29 (62%)
 Frame = +1

Query: 130 KEKKIVWNFNSLKLNLQNILYSQLQYTHL 216
           KE KI+ + ++  ++  N  Y +LQY ++
Sbjct: 77  KEPKIISSLSNKTIHNNNNNYKKLQYYNI 105


>DQ325107-1|ABD14121.1|  176|Apis mellifera complementary sex
           determiner protein.
          Length = 176

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 9/29 (31%), Positives = 18/29 (62%)
 Frame = +1

Query: 130 KEKKIVWNFNSLKLNLQNILYSQLQYTHL 216
           KE KI+ + ++  ++  N  Y +LQY ++
Sbjct: 77  KEPKIISSLSNKTIHNNNNNYKKLQYYNI 105


>DQ325106-1|ABD14120.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 9/29 (31%), Positives = 18/29 (62%)
 Frame = +1

Query: 130 KEKKIVWNFNSLKLNLQNILYSQLQYTHL 216
           KE KI+ + ++  ++  N  Y +LQY ++
Sbjct: 77  KEPKIISSLSNKTIHNNNNNYKKLQYYNI 105


>AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex
           determiner protein.
          Length = 410

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 9/29 (31%), Positives = 18/29 (62%)
 Frame = +1

Query: 130 KEKKIVWNFNSLKLNLQNILYSQLQYTHL 216
           KE KI+ + ++  ++  N  Y +LQY ++
Sbjct: 310 KEPKIISSLSNKTIHNNNNNYKKLQYYNI 338


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,919
Number of Sequences: 438
Number of extensions: 4211
Number of successful extensions: 20
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23266665
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)