Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV13j02f
(594 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U29612-7|AAO61437.1| 205|Caenorhabditis elegans Heat shock prot... 105 2e-23
U29612-6|AAA68804.1| 219|Caenorhabditis elegans Heat shock prot... 105 2e-23
U29612-8|AAW57827.1| 108|Caenorhabditis elegans Heat shock prot... 101 3e-22
U41109-5|AAB37035.1| 149|Caenorhabditis elegans Heat shock prot... 43 1e-04
U41109-4|AAQ62453.1| 148|Caenorhabditis elegans Heat shock prot... 43 1e-04
L15188-10|AAA27953.1| 110|Caenorhabditis elegans Heat shock pro... 43 1e-04
U39645-6|AAA80366.1| 368|Caenorhabditis elegans Heat shock prot... 39 0.003
AC024830-3|AAF59604.3| 180|Caenorhabditis elegans Hypothetical ... 36 0.016
Z81504-3|CAB04117.2| 349|Caenorhabditis elegans Hypothetical pr... 29 1.9
M14334-1|AAA28070.1| 144|Caenorhabditis elegans protein ( C.ele... 29 1.9
Z35640-2|CAA84703.1| 159|Caenorhabditis elegans Hypothetical pr... 29 3.3
K03273-3|AAA28067.1| 144|Caenorhabditis elegans heat shock prot... 28 4.4
AC024772-2|AAF60537.2| 756|Caenorhabditis elegans Osm-9 and cap... 28 4.4
U53180-6|AAA96288.1| 202|Caenorhabditis elegans Hypothetical pr... 28 5.8
X01577-1|CAA25732.1| 97|Caenorhabditis elegans protein ( C. el... 27 7.6
U08022-1|AAA17722.1| 515|Caenorhabditis elegans STE12 transcrip... 27 7.6
AL110501-6|CAH19094.1| 466|Caenorhabditis elegans Hypothetical ... 27 7.6
AL110501-5|CAB54505.1| 552|Caenorhabditis elegans Hypothetical ... 27 7.6
AC006774-2|AAF60616.1| 143|Caenorhabditis elegans Heat shock pr... 27 7.6
AC006620-3|AAF39779.2| 579|Caenorhabditis elegans Hypothetical ... 27 7.6
>U29612-7|AAO61437.1| 205|Caenorhabditis elegans Heat shock protein
protein 25,isoform b protein.
Length = 205
Score = 105 bits (252), Expect = 2e-23
Identities = 64/168 (38%), Positives = 96/168 (57%), Gaps = 30/168 (17%)
Frame = +1
Query: 181 KRNIPIKLGDFSVIDTEFSSIRERFDAE-------MRKMEEEMSKFR------SELMNRE 321
+R I + ++SVID EF ++R+RF+ E M+++ E +R + + N+
Sbjct: 3 ERRIDVNRSNYSVIDNEFGNMRDRFEQEMRRVEEEMKRLRSEFEGYRPNGGPPAAISNQP 62
Query: 322 SNNFFKXXXXXXXXXQ-------------HSDSRQLAE-PSH---WDSLNSPLIQDEGDG 450
N + + H S +A P++ D+L SPLI+DE DG
Sbjct: 63 YNAYSNTSSHHETSNRTGGFGSPLPPPSFHGPSDLMAHRPTYDPYLDNLKSPLIKDESDG 122
Query: 451 KTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDTKSVYREYNRE 594
KTL+LRFDV+ Y PEE+ VKT+DN+LLVHAKHEEK+ ++V+REYN+E
Sbjct: 123 KTLRLRFDVANYKPEEVTVKTIDNRLLVHAKHEEKTPQRTVFREYNQE 170
>U29612-6|AAA68804.1| 219|Caenorhabditis elegans Heat shock protein
protein 25,isoform a protein.
Length = 219
Score = 105 bits (252), Expect = 2e-23
Identities = 64/168 (38%), Positives = 96/168 (57%), Gaps = 30/168 (17%)
Frame = +1
Query: 181 KRNIPIKLGDFSVIDTEFSSIRERFDAE-------MRKMEEEMSKFR------SELMNRE 321
+R I + ++SVID EF ++R+RF+ E M+++ E +R + + N+
Sbjct: 17 ERRIDVNRSNYSVIDNEFGNMRDRFEQEMRRVEEEMKRLRSEFEGYRPNGGPPAAISNQP 76
Query: 322 SNNFFKXXXXXXXXXQ-------------HSDSRQLAE-PSH---WDSLNSPLIQDEGDG 450
N + + H S +A P++ D+L SPLI+DE DG
Sbjct: 77 YNAYSNTSSHHETSNRTGGFGSPLPPPSFHGPSDLMAHRPTYDPYLDNLKSPLIKDESDG 136
Query: 451 KTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDTKSVYREYNRE 594
KTL+LRFDV+ Y PEE+ VKT+DN+LLVHAKHEEK+ ++V+REYN+E
Sbjct: 137 KTLRLRFDVANYKPEEVTVKTIDNRLLVHAKHEEKTPQRTVFREYNQE 184
>U29612-8|AAW57827.1| 108|Caenorhabditis elegans Heat shock protein
protein 25,isoform c protein.
Length = 108
Score = 101 bits (243), Expect = 3e-22
Identities = 43/62 (69%), Positives = 55/62 (88%)
Frame = +1
Query: 409 DSLNSPLIQDEGDGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDTKSVYREYN 588
D+L SPLI+DE DGKTL+LRFDV+ Y PEE+ VKT+DN+LLVHAKHEEK+ ++V+REYN
Sbjct: 12 DNLKSPLIKDESDGKTLRLRFDVANYKPEEVTVKTIDNRLLVHAKHEEKTPQRTVFREYN 71
Query: 589 RE 594
+E
Sbjct: 72 QE 73
>U41109-5|AAB37035.1| 149|Caenorhabditis elegans Heat shock protein
protein 17,isoform a protein.
Length = 149
Score = 43.2 bits (97), Expect = 1e-04
Identities = 17/30 (56%), Positives = 23/30 (76%)
Frame = +1
Query: 472 DVSQYTPEEIVVKTVDNKLLVHAKHEEKSD 561
DVSQ+ PEE+ V VDN+L++ KH EK+D
Sbjct: 62 DVSQFEPEELKVNIVDNQLIIEGKHNEKTD 91
>U41109-4|AAQ62453.1| 148|Caenorhabditis elegans Heat shock protein
protein 17,isoform b protein.
Length = 148
Score = 43.2 bits (97), Expect = 1e-04
Identities = 17/30 (56%), Positives = 23/30 (76%)
Frame = +1
Query: 472 DVSQYTPEEIVVKTVDNKLLVHAKHEEKSD 561
DVSQ+ PEE+ V VDN+L++ KH EK+D
Sbjct: 61 DVSQFEPEELKVNIVDNQLIIEGKHNEKTD 90
>L15188-10|AAA27953.1| 110|Caenorhabditis elegans Heat shock
protein protein 12.2 protein.
Length = 110
Score = 43.2 bits (97), Expect = 1e-04
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Frame = +1
Query: 400 SHWD---SLNSPLIQDEGDGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDTK- 567
S WD N +++ + ++ DV +TP+EI VK +LL+H +HE +SD
Sbjct: 12 STWDWPLQHNDGVVKVHNTKEKFEVGLDVQFFTPKEIEVKVSGQELLIHCRHETRSDNHG 71
Query: 568 SVYREYNR 591
+V RE NR
Sbjct: 72 TVAREINR 79
>U39645-6|AAA80366.1| 368|Caenorhabditis elegans Heat shock protein
protein 43 protein.
Length = 368
Score = 38.7 bits (86), Expect = 0.003
Identities = 18/57 (31%), Positives = 33/57 (57%)
Frame = +1
Query: 415 LNSPLIQDEGDGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDTKSVYREY 585
+NS ++ D+ + + D Q+ PEEI VKT+D+ L++ +HE+ D + + Y
Sbjct: 103 VNSNVVNDD---RRFAVDMDCYQFRPEEIQVKTLDDTLMIEGRHEDIRDKDNFTKMY 156
>AC024830-3|AAF59604.3| 180|Caenorhabditis elegans Hypothetical
protein Y55F3BR.6 protein.
Length = 180
Score = 36.3 bits (80), Expect = 0.016
Identities = 19/59 (32%), Positives = 27/59 (45%)
Frame = +1
Query: 388 LAEPSHWDSLNSPLIQDEGDGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDT 564
++ PS S N L + DVS+Y + + V VDN ++V H EK DT
Sbjct: 58 ISSPSVVGSQNGNLTSIRVTNTSFHAILDVSKYDADSLKVTVVDNNIIVEGSHGEKEDT 116
>Z81504-3|CAB04117.2| 349|Caenorhabditis elegans Hypothetical
protein F15H9.3 protein.
Length = 349
Score = 29.5 bits (63), Expect = 1.9
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = -2
Query: 194 GIFLLRPLSAIFHVICRVEIVETKQTLKRSRVNTFHWNNTHSTADKTVLIISRP 33
G+F++ PLS IC I+ + +L+ +T +HS V+I+S P
Sbjct: 255 GVFIIVPLS-----ICMFVIITEEVSLQELATDTMFLVGSHSMCSSAVMILSNP 303
>M14334-1|AAA28070.1| 144|Caenorhabditis elegans protein (
C.elegans heat shockprotein genes 16-41 and 16-2,
complete cds, flanked byCeRep16 repetitive elements. ).
Length = 144
Score = 29.5 bits (63), Expect = 1.9
Identities = 14/61 (22%), Positives = 30/61 (49%)
Frame = +1
Query: 409 DSLNSPLIQDEGDGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDTKSVYREYN 588
D++ ++ DE ++ DVS + PE + +K +L + E KS+ + R ++
Sbjct: 42 DNIGEQIVNDESK---FSVQLDVSHFKPENLKIKLDGRELKIEGIQETKSEHGYLKRSFS 98
Query: 589 R 591
+
Sbjct: 99 K 99
>Z35640-2|CAA84703.1| 159|Caenorhabditis elegans Hypothetical
protein F43D9.4 protein.
Length = 159
Score = 28.7 bits (61), Expect = 3.3
Identities = 13/52 (25%), Positives = 25/52 (48%)
Frame = +1
Query: 439 EGDGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDTKSVYREYNRE 594
E + ++ DV+ + PEE+ V + L + HE K++ R + R+
Sbjct: 47 ENTAQKFCVKLDVAAFKPEELKVNLEGHVLTIEGHHEVKTEHGFSKRSFTRQ 98
>K03273-3|AAA28067.1| 144|Caenorhabditis elegans heat shock protein
16-48a protein.
Length = 144
Score = 28.3 bits (60), Expect = 4.4
Identities = 13/61 (21%), Positives = 31/61 (50%)
Frame = +1
Query: 409 DSLNSPLIQDEGDGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDTKSVYREYN 588
D++ ++ DE ++ DVS + PE++ ++ +L + E+KS+ R ++
Sbjct: 42 DNIGEQIVNDESK---FSVQLDVSHFKPEDLKIELDGRELKIEGIQEKKSEHGYSKRSFS 98
Query: 589 R 591
+
Sbjct: 99 K 99
>AC024772-2|AAF60537.2| 756|Caenorhabditis elegans Osm-9 and
capsaicin receptor-relatedprotein 4 protein.
Length = 756
Score = 28.3 bits (60), Expect = 4.4
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 247 ERFDAEMRKMEEEMSKFRSELMNRE 321
E F+ + +KM EE KFR EL +
Sbjct: 701 EEFECQRKKMHEERRKFREELRTNQ 725
>U53180-6|AAA96288.1| 202|Caenorhabditis elegans Hypothetical
protein D1014.4 protein.
Length = 202
Score = 27.9 bits (59), Expect = 5.8
Identities = 23/89 (25%), Positives = 40/89 (44%)
Frame = +2
Query: 293 NSDQNS*TEKATISSRAQLARRHLHSTVTADSLLSPVTGIA*TRRSFKTRVTARLSSFAL 472
+++ S E TIS +Q+A + L V+ PV+ +R F +SF
Sbjct: 113 SNELQSVQELRTISGESQMAEQALDYIVSKTFKKIPVSSQKMSRDIFNVCFVFSNNSFIQ 172
Query: 473 MSASILPKRSLLRLSTTNYWSMPNTRRNL 559
+ + R +L +S+ N S+P T+ L
Sbjct: 173 STRDAINYRQILVISSLNDISVPLTQDEL 201
>X01577-1|CAA25732.1| 97|Caenorhabditis elegans protein ( C.
elegans mRNA 3'-regionfor heat shock protein hsp 16-41
(exon 2).somal genes.).
Length = 97
Score = 27.5 bits (58), Expect = 7.6
Identities = 12/49 (24%), Positives = 24/49 (48%)
Frame = +1
Query: 445 DGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDTKSVYREYNR 591
D ++ DVS + PE + +K +L + E KS+ + R +++
Sbjct: 4 DESKFSVQLDVSHFKPENLKIKLDGRELKIEGIQETKSEHGYLKRSFSK 52
>U08022-1|AAA17722.1| 515|Caenorhabditis elegans STE12
transcriptional activator protein.
Length = 515
Score = 27.5 bits (58), Expect = 7.6
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +3
Query: 237 KHQRALRCRNEEDGRRN-EQIQIRTHEQRKQQFLQEH 344
+ Q A R R EE+ RR E Q +QR Q F Q+H
Sbjct: 194 RQQWAERSRYEEEQRRQYEAQQTYAQQQRAQAFWQQH 230
>AL110501-6|CAH19094.1| 466|Caenorhabditis elegans Hypothetical
protein Y79H2A.1b protein.
Length = 466
Score = 27.5 bits (58), Expect = 7.6
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +3
Query: 237 KHQRALRCRNEEDGRRN-EQIQIRTHEQRKQQFLQEH 344
+ Q A R R EE+ RR E Q +QR Q F Q+H
Sbjct: 145 RQQWAERSRYEEEQRRQYEAQQTYAQQQRAQAFWQQH 181
>AL110501-5|CAB54505.1| 552|Caenorhabditis elegans Hypothetical
protein Y79H2A.1a protein.
Length = 552
Score = 27.5 bits (58), Expect = 7.6
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +3
Query: 237 KHQRALRCRNEEDGRRN-EQIQIRTHEQRKQQFLQEH 344
+ Q A R R EE+ RR E Q +QR Q F Q+H
Sbjct: 231 RQQWAERSRYEEEQRRQYEAQQTYAQQQRAQAFWQQH 267
>AC006774-2|AAF60616.1| 143|Caenorhabditis elegans Heat shock
protein protein 16.41 protein.
Length = 143
Score = 27.5 bits (58), Expect = 7.6
Identities = 12/49 (24%), Positives = 24/49 (48%)
Frame = +1
Query: 445 DGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDTKSVYREYNR 591
D ++ DVS + PE + +K +L + E KS+ + R +++
Sbjct: 50 DESKFSVQLDVSHFKPENLKIKLDGRELKIEGIQETKSEHGYLKRSFSK 98
>AC006620-3|AAF39779.2| 579|Caenorhabditis elegans Hypothetical
protein C51G7.4 protein.
Length = 579
Score = 27.5 bits (58), Expect = 7.6
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +3
Query: 237 KHQRALRCRNEEDGRRN-EQIQIRTHEQRKQQFLQEH 344
+ Q A R R EE+ RR E Q +QR Q F Q+H
Sbjct: 258 RQQWAERSRYEEEQRRQYEAQQTYAQQQRAQAFWQQH 294
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,792,085
Number of Sequences: 27780
Number of extensions: 217903
Number of successful extensions: 883
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 840
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 880
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1258229602
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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