Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV13i08f
(619 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC063586-1|AAH63586.1| 298|Homo sapiens golgi phosphoprotein 3 ... 137 3e-32
BC033725-1|AAH33725.1| 298|Homo sapiens golgi phosphoprotein 3 ... 137 3e-32
BC012123-1|AAH12123.1| 298|Homo sapiens golgi phosphoprotein 3 ... 137 3e-32
AK075156-1|BAC11438.1| 298|Homo sapiens protein ( Homo sapiens ... 137 3e-32
AJ296152-1|CAC13124.1| 298|Homo sapiens Golgi protein protein. 137 3e-32
BC013870-1|AAH13870.1| 285|Homo sapiens golgi phosphoprotein 3-... 130 3e-30
AL356356-9|CAI15495.1| 285|Homo sapiens golgi phosphoprotein 3-... 130 3e-30
AL356292-3|CAI13650.1| 285|Homo sapiens golgi phosphoprotein 3-... 130 3e-30
AJ296153-1|CAC13125.1| 285|Homo sapiens GPP34-related protein p... 130 3e-30
AL356356-8|CAI15494.1| 269|Homo sapiens golgi phosphoprotein 3-... 126 6e-29
AL356292-2|CAI13651.1| 269|Homo sapiens golgi phosphoprotein 3-... 126 6e-29
AL133078-1|CAB61398.1| 208|Homo sapiens hypothetical protein pr... 113 6e-25
AK001549-1|BAA91750.1| 201|Homo sapiens protein ( Homo sapiens ... 105 1e-22
>BC063586-1|AAH63586.1| 298|Homo sapiens golgi phosphoprotein 3
(coat-protein) protein.
Length = 298
Score = 137 bits (331), Expect = 3e-32
Identities = 65/104 (62%), Positives = 72/104 (69%)
Frame = +1
Query: 307 DKEGYTSFWNDCISSXXXXXXXXXXXXXXXXXXXXXXXXXKGLLSRKVIVKSDTLTGDVL 486
D+EGYTSFWNDCISS K LL+RKVI KSD TGDVL
Sbjct: 73 DREGYTSFWNDCISSGLRGCMLIELALRGRLQLEACGMRRKSLLTRKVICKSDAPTGDVL 132
Query: 487 LDEALKHMKDTDPPETVQSWIEYLSGETWNPMKLKYQLKNVRER 618
LDEALKH+K+T PPETVQ+WIE LSGETWNP+KL YQL+NVRER
Sbjct: 133 LDEALKHVKETQPPETVQNWIELLSGETWNPLKLHYQLRNVRER 176
>BC033725-1|AAH33725.1| 298|Homo sapiens golgi phosphoprotein 3
(coat-protein) protein.
Length = 298
Score = 137 bits (331), Expect = 3e-32
Identities = 65/104 (62%), Positives = 72/104 (69%)
Frame = +1
Query: 307 DKEGYTSFWNDCISSXXXXXXXXXXXXXXXXXXXXXXXXXKGLLSRKVIVKSDTLTGDVL 486
D+EGYTSFWNDCISS K LL+RKVI KSD TGDVL
Sbjct: 73 DREGYTSFWNDCISSGLRGCMLIELALRGRLQLEACGMRRKSLLTRKVICKSDAPTGDVL 132
Query: 487 LDEALKHMKDTDPPETVQSWIEYLSGETWNPMKLKYQLKNVRER 618
LDEALKH+K+T PPETVQ+WIE LSGETWNP+KL YQL+NVRER
Sbjct: 133 LDEALKHVKETQPPETVQNWIELLSGETWNPLKLHYQLRNVRER 176
>BC012123-1|AAH12123.1| 298|Homo sapiens golgi phosphoprotein 3
(coat-protein) protein.
Length = 298
Score = 137 bits (331), Expect = 3e-32
Identities = 65/104 (62%), Positives = 72/104 (69%)
Frame = +1
Query: 307 DKEGYTSFWNDCISSXXXXXXXXXXXXXXXXXXXXXXXXXKGLLSRKVIVKSDTLTGDVL 486
D+EGYTSFWNDCISS K LL+RKVI KSD TGDVL
Sbjct: 73 DREGYTSFWNDCISSGLRGCMLIELALRGRLQLEACGMRRKSLLTRKVICKSDAPTGDVL 132
Query: 487 LDEALKHMKDTDPPETVQSWIEYLSGETWNPMKLKYQLKNVRER 618
LDEALKH+K+T PPETVQ+WIE LSGETWNP+KL YQL+NVRER
Sbjct: 133 LDEALKHVKETQPPETVQNWIELLSGETWNPLKLHYQLRNVRER 176
>AK075156-1|BAC11438.1| 298|Homo sapiens protein ( Homo sapiens
cDNA FLJ90675 fis, clone PLACE1005669. ).
Length = 298
Score = 137 bits (331), Expect = 3e-32
Identities = 65/104 (62%), Positives = 72/104 (69%)
Frame = +1
Query: 307 DKEGYTSFWNDCISSXXXXXXXXXXXXXXXXXXXXXXXXXKGLLSRKVIVKSDTLTGDVL 486
D+EGYTSFWNDCISS K LL+RKVI KSD TGDVL
Sbjct: 73 DREGYTSFWNDCISSGLRGCMLIELALRGRLQLEACGMRRKSLLTRKVICKSDAPTGDVL 132
Query: 487 LDEALKHMKDTDPPETVQSWIEYLSGETWNPMKLKYQLKNVRER 618
LDEALKH+K+T PPETVQ+WIE LSGETWNP+KL YQL+NVRER
Sbjct: 133 LDEALKHVKETQPPETVQNWIELLSGETWNPLKLHYQLRNVRER 176
>AJ296152-1|CAC13124.1| 298|Homo sapiens Golgi protein protein.
Length = 298
Score = 137 bits (331), Expect = 3e-32
Identities = 65/104 (62%), Positives = 72/104 (69%)
Frame = +1
Query: 307 DKEGYTSFWNDCISSXXXXXXXXXXXXXXXXXXXXXXXXXKGLLSRKVIVKSDTLTGDVL 486
D+EGYTSFWNDCISS K LL+RKVI KSD TGDVL
Sbjct: 73 DREGYTSFWNDCISSGLRGCMLIELALRGRLQLEACGMRRKSLLTRKVICKSDAPTGDVL 132
Query: 487 LDEALKHMKDTDPPETVQSWIEYLSGETWNPMKLKYQLKNVRER 618
LDEALKH+K+T PPETVQ+WIE LSGETWNP+KL YQL+NVRER
Sbjct: 133 LDEALKHVKETQPPETVQNWIELLSGETWNPLKLHYQLRNVRER 176
>BC013870-1|AAH13870.1| 285|Homo sapiens golgi phosphoprotein
3-like protein.
Length = 285
Score = 130 bits (315), Expect = 3e-30
Identities = 62/104 (59%), Positives = 71/104 (68%)
Frame = +1
Query: 307 DKEGYTSFWNDCISSXXXXXXXXXXXXXXXXXXXXXXXXXKGLLSRKVIVKSDTLTGDVL 486
DKEGYTSFWNDCISS K LL RKV++KSD+ TGDVL
Sbjct: 59 DKEGYTSFWNDCISSGLRGGILIELAMRGRIYLEPPTMRKKRLLDRKVLLKSDSPTGDVL 118
Query: 487 LDEALKHMKDTDPPETVQSWIEYLSGETWNPMKLKYQLKNVRER 618
LDE LKH+K T+P ETVQ+WIE L+GETWNP KL+YQL+NVRER
Sbjct: 119 LDETLKHIKATEPTETVQTWIELLTGETWNPFKLQYQLRNVRER 162
>AL356356-9|CAI15495.1| 285|Homo sapiens golgi phosphoprotein
3-like protein.
Length = 285
Score = 130 bits (315), Expect = 3e-30
Identities = 62/104 (59%), Positives = 71/104 (68%)
Frame = +1
Query: 307 DKEGYTSFWNDCISSXXXXXXXXXXXXXXXXXXXXXXXXXKGLLSRKVIVKSDTLTGDVL 486
DKEGYTSFWNDCISS K LL RKV++KSD+ TGDVL
Sbjct: 59 DKEGYTSFWNDCISSGLRGGILIELAMRGRIYLEPPTMRKKRLLDRKVLLKSDSPTGDVL 118
Query: 487 LDEALKHMKDTDPPETVQSWIEYLSGETWNPMKLKYQLKNVRER 618
LDE LKH+K T+P ETVQ+WIE L+GETWNP KL+YQL+NVRER
Sbjct: 119 LDETLKHIKATEPTETVQTWIELLTGETWNPFKLQYQLRNVRER 162
>AL356292-3|CAI13650.1| 285|Homo sapiens golgi phosphoprotein
3-like protein.
Length = 285
Score = 130 bits (315), Expect = 3e-30
Identities = 62/104 (59%), Positives = 71/104 (68%)
Frame = +1
Query: 307 DKEGYTSFWNDCISSXXXXXXXXXXXXXXXXXXXXXXXXXKGLLSRKVIVKSDTLTGDVL 486
DKEGYTSFWNDCISS K LL RKV++KSD+ TGDVL
Sbjct: 59 DKEGYTSFWNDCISSGLRGGILIELAMRGRIYLEPPTMRKKRLLDRKVLLKSDSPTGDVL 118
Query: 487 LDEALKHMKDTDPPETVQSWIEYLSGETWNPMKLKYQLKNVRER 618
LDE LKH+K T+P ETVQ+WIE L+GETWNP KL+YQL+NVRER
Sbjct: 119 LDETLKHIKATEPTETVQTWIELLTGETWNPFKLQYQLRNVRER 162
>AJ296153-1|CAC13125.1| 285|Homo sapiens GPP34-related protein
protein.
Length = 285
Score = 130 bits (315), Expect = 3e-30
Identities = 62/104 (59%), Positives = 71/104 (68%)
Frame = +1
Query: 307 DKEGYTSFWNDCISSXXXXXXXXXXXXXXXXXXXXXXXXXKGLLSRKVIVKSDTLTGDVL 486
DKEGYTSFWNDCISS K LL RKV++KSD+ TGDVL
Sbjct: 59 DKEGYTSFWNDCISSGLRGGILIELAMRGRIYLEPPTMRKKRLLDRKVLLKSDSPTGDVL 118
Query: 487 LDEALKHMKDTDPPETVQSWIEYLSGETWNPMKLKYQLKNVRER 618
LDE LKH+K T+P ETVQ+WIE L+GETWNP KL+YQL+NVRER
Sbjct: 119 LDETLKHIKATEPTETVQTWIELLTGETWNPFKLQYQLRNVRER 162
>AL356356-8|CAI15494.1| 269|Homo sapiens golgi phosphoprotein
3-like protein.
Length = 269
Score = 126 bits (304), Expect = 6e-29
Identities = 60/102 (58%), Positives = 69/102 (67%)
Frame = +1
Query: 313 EGYTSFWNDCISSXXXXXXXXXXXXXXXXXXXXXXXXXKGLLSRKVIVKSDTLTGDVLLD 492
EGYTSFWNDCISS K LL RKV++KSD+ TGDVLLD
Sbjct: 83 EGYTSFWNDCISSGLRGGILIELAMRGRIYLEPPTMRKKRLLDRKVLLKSDSPTGDVLLD 142
Query: 493 EALKHMKDTDPPETVQSWIEYLSGETWNPMKLKYQLKNVRER 618
E LKH+K T+P ETVQ+WIE L+GETWNP KL+YQL+NVRER
Sbjct: 143 ETLKHIKATEPTETVQTWIELLTGETWNPFKLQYQLRNVRER 184
>AL356292-2|CAI13651.1| 269|Homo sapiens golgi phosphoprotein
3-like protein.
Length = 269
Score = 126 bits (304), Expect = 6e-29
Identities = 60/102 (58%), Positives = 69/102 (67%)
Frame = +1
Query: 313 EGYTSFWNDCISSXXXXXXXXXXXXXXXXXXXXXXXXXKGLLSRKVIVKSDTLTGDVLLD 492
EGYTSFWNDCISS K LL RKV++KSD+ TGDVLLD
Sbjct: 83 EGYTSFWNDCISSGLRGGILIELAMRGRIYLEPPTMRKKRLLDRKVLLKSDSPTGDVLLD 142
Query: 493 EALKHMKDTDPPETVQSWIEYLSGETWNPMKLKYQLKNVRER 618
E LKH+K T+P ETVQ+WIE L+GETWNP KL+YQL+NVRER
Sbjct: 143 ETLKHIKATEPTETVQTWIELLTGETWNPFKLQYQLRNVRER 184
>AL133078-1|CAB61398.1| 208|Homo sapiens hypothetical protein
protein.
Length = 208
Score = 113 bits (271), Expect = 6e-25
Identities = 51/64 (79%), Positives = 57/64 (89%)
Frame = +1
Query: 427 KGLLSRKVIVKSDTLTGDVLLDEALKHMKDTDPPETVQSWIEYLSGETWNPMKLKYQLKN 606
K LL+RKVI KSD TGDVLLDEALKH+K+T PPETVQ+WIE LSGETWNP+KL YQL+N
Sbjct: 23 KSLLTRKVICKSDAPTGDVLLDEALKHVKETQPPETVQNWIELLSGETWNPLKLHYQLRN 82
Query: 607 VRER 618
VRER
Sbjct: 83 VRER 86
>AK001549-1|BAA91750.1| 201|Homo sapiens protein ( Homo sapiens
cDNA FLJ10687 fis, clone NT2RP3000312. ).
Length = 201
Score = 105 bits (252), Expect = 1e-22
Identities = 47/64 (73%), Positives = 56/64 (87%)
Frame = +1
Query: 427 KGLLSRKVIVKSDTLTGDVLLDEALKHMKDTDPPETVQSWIEYLSGETWNPMKLKYQLKN 606
K LL RKV++KSD+ TGDVLLDE LKH+K T+P ETVQ+WIE L+GETWNP KL+YQL+N
Sbjct: 15 KRLLDRKVLLKSDSPTGDVLLDETLKHIKATEPTETVQTWIELLTGETWNPFKLQYQLRN 74
Query: 607 VRER 618
VRER
Sbjct: 75 VRER 78
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,287,913
Number of Sequences: 237096
Number of extensions: 1029759
Number of successful extensions: 3365
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3295
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3354
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6635341780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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