Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV13h20f
         (636 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical pr...    31   0.69 
Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical pr...    31   0.69 
Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical p...    31   0.69 
AL031627-17|CAA20950.2|  344|Caenorhabditis elegans Hypothetical...    27   8.5  
AF067947-6|AAO25992.1|  255|Caenorhabditis elegans Hypothetical ...    27   8.5  

>Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical protein
            F25F2.2 protein.
          Length = 4307

 Score = 31.1 bits (67), Expect = 0.69
 Identities = 21/74 (28%), Positives = 38/74 (51%)
 Frame = -3

Query: 460  IFSGALFSAIEGKITATMRRLNLARRRQSIASDPTVVESLTIGCDTKVHCTRGKFTVRGK 281
            +F    ++A   + T+  +RL   +   S  +D T+  SL+   D ++H   G  T+ G+
Sbjct: 2200 VFEKLKYTASTPESTSIGQRLLTIKATTSDEND-TIEYSLSGSKDIEIHPETGDVTITGQ 2258

Query: 280  LPSEESRNKHLKLV 239
            L  E+++   LKLV
Sbjct: 2259 LDYEKTQKYDLKLV 2272


>Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical protein
            F25F2.2 protein.
          Length = 4307

 Score = 31.1 bits (67), Expect = 0.69
 Identities = 21/74 (28%), Positives = 38/74 (51%)
 Frame = -3

Query: 460  IFSGALFSAIEGKITATMRRLNLARRRQSIASDPTVVESLTIGCDTKVHCTRGKFTVRGK 281
            +F    ++A   + T+  +RL   +   S  +D T+  SL+   D ++H   G  T+ G+
Sbjct: 2200 VFEKLKYTASTPESTSIGQRLLTIKATTSDEND-TIEYSLSGSKDIEIHPETGDVTITGQ 2258

Query: 280  LPSEESRNKHLKLV 239
            L  E+++   LKLV
Sbjct: 2259 LDYEKTQKYDLKLV 2272


>Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical
            protein F25F2.2 protein.
          Length = 4307

 Score = 31.1 bits (67), Expect = 0.69
 Identities = 21/74 (28%), Positives = 38/74 (51%)
 Frame = -3

Query: 460  IFSGALFSAIEGKITATMRRLNLARRRQSIASDPTVVESLTIGCDTKVHCTRGKFTVRGK 281
            +F    ++A   + T+  +RL   +   S  +D T+  SL+   D ++H   G  T+ G+
Sbjct: 2200 VFEKLKYTASTPESTSIGQRLLTIKATTSDEND-TIEYSLSGSKDIEIHPETGDVTITGQ 2258

Query: 280  LPSEESRNKHLKLV 239
            L  E+++   LKLV
Sbjct: 2259 LDYEKTQKYDLKLV 2272


>AL031627-17|CAA20950.2|  344|Caenorhabditis elegans Hypothetical
           protein Y102A5C.28 protein.
          Length = 344

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 13/50 (26%), Positives = 26/50 (52%)
 Frame = -2

Query: 524 TVICLKKLKVSIIDFI*APNIHIQWSSVLRHRGENNSNHAKVESCQASSV 375
           T+  +K  +V++ +F+  P+  + WS  L+H G N     +  +  A S+
Sbjct: 297 TIFIVKNYRVALFEFV-CPSC-LCWSETLKHMGSNRITSYRSNTVNALSM 344


>AF067947-6|AAO25992.1|  255|Caenorhabditis elegans Hypothetical
           protein T10B5.10 protein.
          Length = 255

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 17/60 (28%), Positives = 28/60 (46%)
 Frame = +2

Query: 71  LNQGSIPPGALRVGTDADGDEIYAGRAPHEGEIVPAKVIPNKNVCFISFCGEEILKDQFE 250
           LN G+     L++ TD+D   ++   A   GE      + N+ +  ++ CG EI   Q E
Sbjct: 148 LNDGTSIAALLQIATDSD--LVFTFNARKMGEYCFESNLKNQKMVTLTDCGNEIRVTQLE 205


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,823,679
Number of Sequences: 27780
Number of extensions: 287472
Number of successful extensions: 732
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 703
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 731
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)