Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV13h17f
         (366 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    22   2.6  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    21   6.0  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    20   8.0  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                20   8.0  

>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 21.8 bits (44), Expect = 2.6
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +3

Query: 129 SAANAIALGAMTVVAVGTFLFTWWQ 203
           S  N I LG++  +  G FLF  W+
Sbjct: 287 SQINGI-LGSLVAITGGCFLFRAWE 310


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 20.6 bits (41), Expect = 6.0
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -2

Query: 170 HNRHRA*CYSISSGCVAALRIRILGHR 90
           H R     + IS+GCV+ +  RI  +R
Sbjct: 18  HQRCSRDWFRISAGCVSRISNRISRNR 44


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +1

Query: 169 WRSEHFSLLGG 201
           W SEHF   GG
Sbjct: 333 WNSEHFFEYGG 343


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 7/20 (35%), Positives = 10/20 (50%)
 Frame = +3

Query: 27  PCKVFHHNHCRFSLPQINCH 86
           P    HH+H   +L +  CH
Sbjct: 281 PSLASHHSHLSSALGRSACH 300


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,448
Number of Sequences: 438
Number of extensions: 2166
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8680350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)