Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV13h10f
(626 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 25 0.80
AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein. 25 0.80
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 24 1.1
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 24 1.1
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 24 1.1
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 24 1.1
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 24 1.1
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 24 1.1
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 24 1.1
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 24 1.1
DQ058012-1|AAY57281.1| 373|Apis mellifera venom allergen acid p... 21 7.4
AY939855-1|AAX33235.1| 388|Apis mellifera venom acid phosphatas... 21 7.4
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 21 7.4
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 21 9.8
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 21 9.8
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 21 9.8
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 24.6 bits (51), Expect = 0.80
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +2
Query: 224 QVVELETDVKEKEDETFEETSPVELLPDTENLEVRSGK 337
+V+E +T +ED+ E + LLP E +E + K
Sbjct: 19 EVIETDTKYNGREDQIPREMNTERLLPYVEIIEQPASK 56
>AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein.
Length = 602
Score = 24.6 bits (51), Expect = 0.80
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +2
Query: 224 QVVELETDVKEKEDETFEETSPVELLPDTENLEVRSGK 337
+V+E +T +ED+ E + LLP E +E + K
Sbjct: 19 EVIETDTKYNGREDQIPREMNTERLLPYVEIIEQPASK 56
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 24.2 bits (50), Expect = 1.1
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 506 TYQNNGQPYVITTQRLQQIRSNFMYWFYD 592
TYQ +PYV T + QIR +Y+F++
Sbjct: 173 TYQCCPEPYVDVTFTI-QIRRRTLYYFFN 200
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 24.2 bits (50), Expect = 1.1
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 506 TYQNNGQPYVITTQRLQQIRSNFMYWFYD 592
TYQ +PYV T + QIR +Y+F++
Sbjct: 173 TYQCCPEPYVDVTFTI-QIRRRTLYYFFN 200
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 24.2 bits (50), Expect = 1.1
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 506 TYQNNGQPYVITTQRLQQIRSNFMYWFYD 592
TYQ +PYV T + QIR +Y+F++
Sbjct: 173 TYQCCPEPYVDVTFTI-QIRRRTLYYFFN 200
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 24.2 bits (50), Expect = 1.1
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 506 TYQNNGQPYVITTQRLQQIRSNFMYWFYD 592
TYQ +PYV T + QIR +Y+F++
Sbjct: 173 TYQCCPEPYVDVTFTI-QIRRRTLYYFFN 200
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 24.2 bits (50), Expect = 1.1
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 506 TYQNNGQPYVITTQRLQQIRSNFMYWFYD 592
TYQ +PYV T + QIR +Y+F++
Sbjct: 173 TYQCCPEPYVDVTFTI-QIRRRTLYYFFN 200
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 24.2 bits (50), Expect = 1.1
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 506 TYQNNGQPYVITTQRLQQIRSNFMYWFYD 592
TYQ +PYV T + QIR +Y+F++
Sbjct: 173 TYQCCPEPYVDVTFTI-QIRRRTLYYFFN 200
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 24.2 bits (50), Expect = 1.1
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 506 TYQNNGQPYVITTQRLQQIRSNFMYWFYD 592
TYQ +PYV T + QIR +Y+F++
Sbjct: 241 TYQCCPEPYVDVTFTI-QIRRRTLYYFFN 268
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 24.2 bits (50), Expect = 1.1
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 506 TYQNNGQPYVITTQRLQQIRSNFMYWFYD 592
TYQ +PYV T + QIR +Y+F++
Sbjct: 241 TYQCCPEPYVDVTFTI-QIRRRTLYYFFN 268
>DQ058012-1|AAY57281.1| 373|Apis mellifera venom allergen acid
phosphatase protein.
Length = 373
Score = 21.4 bits (43), Expect = 7.4
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +1
Query: 430 PLATKYYGRHRN*LFL 477
P+ATKY R+ + +FL
Sbjct: 111 PIATKYLRRYEDNIFL 126
>AY939855-1|AAX33235.1| 388|Apis mellifera venom acid phosphatase
precursor protein.
Length = 388
Score = 21.4 bits (43), Expect = 7.4
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +1
Query: 430 PLATKYYGRHRN*LFL 477
P+ATKY R+ + +FL
Sbjct: 126 PIATKYLRRYEDNIFL 141
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 21.4 bits (43), Expect = 7.4
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +2
Query: 440 PSTTVVTGTDYSYIDGRV 493
PS V +DYSY+D ++
Sbjct: 286 PSVVVSDYSDYSYLDEKL 303
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 21.0 bits (42), Expect = 9.8
Identities = 13/47 (27%), Positives = 21/47 (44%)
Frame = +2
Query: 278 ETSPVELLPDTENLEVRSGKYQLNDGLVGEEPVNLEAVDFNSNNVES 418
E SP+ + E L + + L + VNL VD +N +E+
Sbjct: 609 ELSPLSVPDSVELLFINNNYINLVRPNTFTDKVNLTRVDMYANMIET 655
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 21.0 bits (42), Expect = 9.8
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +2
Query: 461 GTDYSYIDGRVLPATTYQNNGQPYVITTQRLQQIRS 568
G++ S I R+L T Y +NG V +T+ L I S
Sbjct: 799 GSEDSVIP-RILYLTWYSSNGDIKVPSTKVLAMISS 833
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 21.0 bits (42), Expect = 9.8
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = +1
Query: 427 TPLATKYYGRHRN*LFLHR 483
T +YY R + L+LHR
Sbjct: 717 TDPCVRYYPRRKEWLYLHR 735
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,040
Number of Sequences: 438
Number of extensions: 3492
Number of successful extensions: 16
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18704709
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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