Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV13h09f
         (608 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68299-2|CAA92611.2|  344|Caenorhabditis elegans Hypothetical pr...    30   1.5  
U80450-4|AAB37829.1|  926|Caenorhabditis elegans Hypothetical pr...    28   6.0  
AL032648-2|CAA21699.2|  621|Caenorhabditis elegans Hypothetical ...    28   6.0  
Z77663-14|CAB01214.2|  568|Caenorhabditis elegans Hypothetical p...    27   7.9  
Z74473-2|CAA98949.2|  319|Caenorhabditis elegans Hypothetical pr...    27   7.9  
AL161712-11|CAC70135.1| 2870|Caenorhabditis elegans Hypothetical...    27   7.9  
AL110479-8|CAB60316.2|  337|Caenorhabditis elegans Hypothetical ...    27   7.9  
AJ581300-1|CAE46113.1|  568|Caenorhabditis elegans flavin monoox...    27   7.9  

>Z68299-2|CAA92611.2|  344|Caenorhabditis elegans Hypothetical
           protein T04B2.4 protein.
          Length = 344

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = +3

Query: 492 CSDVCGVDVWTNLDVNFYCKFYKWG 566
           C    G+D+WT L   F   F KWG
Sbjct: 75  CLSTAGIDIWTLLTNYFGAMFAKWG 99


>U80450-4|AAB37829.1|  926|Caenorhabditis elegans Hypothetical
           protein M01E11.3 protein.
          Length = 926

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 14/51 (27%), Positives = 26/51 (50%)
 Frame = +3

Query: 198 LKELSDRCENQFLNKQIKSAIDQCPQDPRKEFKCLLFYDMANRLCLATNTS 350
           +K++ +    QFLN +I  A+D   + P    K ++   M  ++  +TN S
Sbjct: 45  VKQIGELVIQQFLNSKISEALDPTMKIPTSAVKVVIVKRMIFQVISSTNIS 95


>AL032648-2|CAA21699.2|  621|Caenorhabditis elegans Hypothetical
           protein Y54G9A.3 protein.
          Length = 621

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 16/66 (24%), Positives = 26/66 (39%)
 Frame = +3

Query: 237 NKQIKSAIDQCPQDPRKEFKCLLFYDMANRLCLATNTSQITLKEDYVAEINKEQTLDNVC 416
           N  ++S++D  PQDP +    LL     + L    N     +KE   A++     + N  
Sbjct: 9   NGSLRSSLDDSPQDPEESETFLLGMVTGDGLGKMFNARYRNIKEKKAAKMTYRAMIYNCL 68

Query: 417 SEAKNW 434
                W
Sbjct: 69  ERPTGW 74


>Z77663-14|CAB01214.2|  568|Caenorhabditis elegans Hypothetical
           protein F53F4.5 protein.
          Length = 568

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = +3

Query: 531 DVNFYCKFYKWGDELLKTQPHVVAN 605
           DV  + ++Y   D LLKT PH VAN
Sbjct: 221 DVQLFSRYY---DTLLKTIPHAVAN 242


>Z74473-2|CAA98949.2|  319|Caenorhabditis elegans Hypothetical
           protein F56H9.1 protein.
          Length = 319

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 16/52 (30%), Positives = 27/52 (51%)
 Frame = +3

Query: 393 EQTLDNVCSEAKNWVLSKFTDYKLYSSKILQVGCSDVCGVDVWTNLDVNFYC 548
           ++T  N+ SEA    L + T  + +   ++Q     VC +DV  N+  +FYC
Sbjct: 213 KRTRGNLSSEANQ--LRRRTSIRFFVQSVIQ---DYVCSMDVVNNMVSHFYC 259


>AL161712-11|CAC70135.1| 2870|Caenorhabditis elegans Hypothetical
           protein Y66D12A.14 protein.
          Length = 2870

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = -1

Query: 356 NL*RISGQAQAVGHIIKQQTFKFFPRV 276
           +L R+ GQA A+G  + Q+TF FF  +
Sbjct: 580 SLRRVLGQAFAMGFALDQRTFPFFDTI 606


>AL110479-8|CAB60316.2|  337|Caenorhabditis elegans Hypothetical
           protein Y105C5B.10 protein.
          Length = 337

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 11/25 (44%), Positives = 12/25 (48%)
 Frame = +3

Query: 492 CSDVCGVDVWTNLDVNFYCKFYKWG 566
           C    GVD+WT L       F KWG
Sbjct: 69  CLSTAGVDIWTLLTNYLGAMFPKWG 93


>AJ581300-1|CAE46113.1|  568|Caenorhabditis elegans flavin
           monooxygenase protein.
          Length = 568

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = +3

Query: 531 DVNFYCKFYKWGDELLKTQPHVVAN 605
           DV  + ++Y   D LLKT PH VAN
Sbjct: 221 DVQLFSRYY---DTLLKTIPHAVAN 242


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,639,435
Number of Sequences: 27780
Number of extensions: 278287
Number of successful extensions: 700
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 680
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 700
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1311096392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)