Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV13g13f
(623 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC026179-1|AAH26179.1| 418|Homo sapiens SEC61A2 protein protein. 310 2e-84
AF346603-1|AAK29084.1| 476|Homo sapiens Sec61 alpha form 2 prot... 310 2e-84
AK022640-1|BAB14148.1| 437|Homo sapiens protein ( Homo sapiens ... 306 4e-83
AF346602-1|AAK29083.1| 476|Homo sapiens Sec61 alpha form 1 prot... 304 2e-82
AF084458-1|AAD39847.1| 476|Homo sapiens sec61 homolog protein. 304 2e-82
AK074928-1|BAC11298.1| 356|Homo sapiens protein ( Homo sapiens ... 67 5e-11
M76558-1|AAA58402.1| 2161|Homo sapiens calcium channel alpha-1D ... 34 0.47
M83566-1|AAA35629.1| 2181|Homo sapiens calcium channel alpha-1 s... 32 1.4
D43747-1|BAA07804.1| 2170|Homo sapiens voltage-dependent calcium... 32 1.4
AB209171-1|BAD92408.1| 1854|Homo sapiens calcium channel, voltag... 32 1.4
U57627-1|AAB03839.2| 901|Homo sapiens ocrl1 protein. 31 4.4
U19906-1|AAB19232.1| 418|Homo sapiens arginine vasopressin rece... 31 4.4
S73899-1|AAC60638.1| 418|Homo sapiens vascular-type vasopressin... 31 4.4
M88162-1|AAA59964.2| 968|Homo sapiens Lowe oculocerebrorenal sy... 31 4.4
L25615-1|AAA62271.1| 418|Homo sapiens arginine vasopressin rece... 31 4.4
DQ177277-1|ABA02557.1| 418|Homo sapiens arginine vasopressin re... 31 4.4
BC130612-1|AAI30613.1| 893|Homo sapiens oculocerebrorenal syndr... 31 4.4
BC094726-1|AAH94726.1| 893|Homo sapiens oculocerebrorenal syndr... 31 4.4
BC074804-1|AAH74804.1| 418|Homo sapiens arginine vasopressin re... 31 4.4
BC074803-1|AAH74803.1| 418|Homo sapiens arginine vasopressin re... 31 4.4
AY322550-1|AAP84363.1| 418|Homo sapiens arginine vasopressin re... 31 4.4
AL662877-2|CAI41087.1| 893|Homo sapiens oculocerebrorenal syndr... 31 4.4
AL662877-1|CAI41088.1| 901|Homo sapiens oculocerebrorenal syndr... 31 4.4
AL138745-5|CAI42615.1| 893|Homo sapiens oculocerebrorenal syndr... 31 4.4
AL138745-4|CAI42616.1| 901|Homo sapiens oculocerebrorenal syndr... 31 4.4
AL022162-2|CAI95696.1| 893|Homo sapiens oculocerebrorenal syndr... 31 4.4
AL022162-1|CAI95695.1| 901|Homo sapiens oculocerebrorenal syndr... 31 4.4
AF101725-1|AAD17891.1| 418|Homo sapiens vasopressin receptor su... 31 4.4
AF030625-1|AAC51861.1| 418|Homo sapiens SCCL vasopressin subtyp... 31 4.4
>BC026179-1|AAH26179.1| 418|Homo sapiens SEC61A2 protein protein.
Length = 418
Score = 310 bits (762), Expect = 2e-84
Identities = 145/155 (93%), Positives = 154/155 (99%)
Frame = +2
Query: 116 MGIKFLEVIKPFCSILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSAD 295
MGIKFLEVIKPFC++LPEI KPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSAD
Sbjct: 1 MGIKFLEVIKPFCAVLPEIQKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSAD 60
Query: 296 PFYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAQKLFG 475
PFYW+RVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAQKLFG
Sbjct: 61 PFYWMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAQKLFG 120
Query: 476 MVITVGQAIVYVMTGMYGEPSEIGAGVCLLIIIQL 580
M+IT+GQAIVYVMTGMYG+P+E+GAG+CLLIIIQL
Sbjct: 121 MIITIGQAIVYVMTGMYGDPAEMGAGICLLIIIQL 155
>AF346603-1|AAK29084.1| 476|Homo sapiens Sec61 alpha form 2
protein.
Length = 476
Score = 310 bits (762), Expect = 2e-84
Identities = 145/155 (93%), Positives = 154/155 (99%)
Frame = +2
Query: 116 MGIKFLEVIKPFCSILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSAD 295
MGIKFLEVIKPFC++LPEI KPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSAD
Sbjct: 1 MGIKFLEVIKPFCAVLPEIQKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSAD 60
Query: 296 PFYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAQKLFG 475
PFYW+RVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAQKLFG
Sbjct: 61 PFYWMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAQKLFG 120
Query: 476 MVITVGQAIVYVMTGMYGEPSEIGAGVCLLIIIQL 580
M+IT+GQAIVYVMTGMYG+P+E+GAG+CLLIIIQL
Sbjct: 121 MIITIGQAIVYVMTGMYGDPAEMGAGICLLIIIQL 155
>AK022640-1|BAB14148.1| 437|Homo sapiens protein ( Homo sapiens
cDNA FLJ12578 fis, clone NT2RM4001054, moderately
similar to Homo sapiens sec61 homolog mRNA. ).
Length = 437
Score = 306 bits (751), Expect = 4e-83
Identities = 143/155 (92%), Positives = 153/155 (98%)
Frame = +2
Query: 116 MGIKFLEVIKPFCSILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSAD 295
MGIKFLEVIKPFC++ PEI KPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSAD
Sbjct: 1 MGIKFLEVIKPFCAVPPEIQKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSAD 60
Query: 296 PFYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAQKLFG 475
PFYW+RVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAQKLFG
Sbjct: 61 PFYWMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAQKLFG 120
Query: 476 MVITVGQAIVYVMTGMYGEPSEIGAGVCLLIIIQL 580
M+IT+GQAIVYV+TGMYG+P+E+GAG+CLLIIIQL
Sbjct: 121 MIITIGQAIVYVITGMYGDPAEMGAGICLLIIIQL 155
>AF346602-1|AAK29083.1| 476|Homo sapiens Sec61 alpha form 1
protein.
Length = 476
Score = 304 bits (746), Expect = 2e-82
Identities = 143/155 (92%), Positives = 151/155 (97%)
Frame = +2
Query: 116 MGIKFLEVIKPFCSILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSAD 295
M IKFLEVIKPFC ILPEI KPERKIQF+EKVLWTAITLFIFLVCCQIPLFGIMSSDSAD
Sbjct: 1 MAIKFLEVIKPFCVILPEIQKPERKIQFKEKVLWTAITLFIFLVCCQIPLFGIMSSDSAD 60
Query: 296 PFYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAQKLFG 475
PFYW+RVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAQKLFG
Sbjct: 61 PFYWMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAQKLFG 120
Query: 476 MVITVGQAIVYVMTGMYGEPSEIGAGVCLLIIIQL 580
M+IT+GQ+IVYVMTGMYG+PSE+GAG+CLLI IQL
Sbjct: 121 MIITIGQSIVYVMTGMYGDPSEMGAGICLLITIQL 155
>AF084458-1|AAD39847.1| 476|Homo sapiens sec61 homolog protein.
Length = 476
Score = 304 bits (746), Expect = 2e-82
Identities = 143/155 (92%), Positives = 151/155 (97%)
Frame = +2
Query: 116 MGIKFLEVIKPFCSILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSAD 295
M IKFLEVIKPFC ILPEI KPERKIQF+EKVLWTAITLFIFLVCCQIPLFGIMSSDSAD
Sbjct: 1 MAIKFLEVIKPFCVILPEIQKPERKIQFKEKVLWTAITLFIFLVCCQIPLFGIMSSDSAD 60
Query: 296 PFYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAQKLFG 475
PFYW+RVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAQKLFG
Sbjct: 61 PFYWMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAQKLFG 120
Query: 476 MVITVGQAIVYVMTGMYGEPSEIGAGVCLLIIIQL 580
M+IT+GQ+IVYVMTGMYG+PSE+GAG+CLLI IQL
Sbjct: 121 MIITIGQSIVYVMTGMYGDPSEMGAGICLLITIQL 155
>AK074928-1|BAC11298.1| 356|Homo sapiens protein ( Homo sapiens
cDNA FLJ90447 fis, clone NT2RP3001240, highly similar to
Canis familiaris sec61 homologue mRNA. ).
Length = 356
Score = 66.9 bits (156), Expect = 5e-11
Identities = 28/35 (80%), Positives = 34/35 (97%)
Frame = +2
Query: 476 MVITVGQAIVYVMTGMYGEPSEIGAGVCLLIIIQL 580
M+IT+GQ+IVYVMTGMYG+PSE+GAG+CLLI IQL
Sbjct: 1 MIITIGQSIVYVMTGMYGDPSEMGAGICLLITIQL 35
>M76558-1|AAA58402.1| 2161|Homo sapiens calcium channel alpha-1D
subunit protein.
Length = 2161
Score = 33.9 bits (74), Expect = 0.47
Identities = 31/95 (32%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
Frame = +2
Query: 320 LASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDRALF-NGAQKLFGMV-ITVG 493
+ S+ L+ L + I+ S L MQL G +T R+ F N Q L + I G
Sbjct: 647 MKSSASLLLLLFLFIIIFSLLGMQLFGGK--FNFDETQTKRSTFDNFPQALLTVFQILTG 704
Query: 494 Q---AIVYVMTGMYGEPSEIGAGVCLLIIIQLVCG 589
+ A++Y YG PS G VC+ II +CG
Sbjct: 705 EDWNAVMYDGIMAYGGPSSSGMIVCIYFIILFICG 739
>M83566-1|AAA35629.1| 2181|Homo sapiens calcium channel alpha-1
subunit protein.
Length = 2181
Score = 32.3 bits (70), Expect = 1.4
Identities = 30/88 (34%), Positives = 41/88 (46%), Gaps = 5/88 (5%)
Frame = +2
Query: 341 LMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDRALF-NGAQKLFGMV-ITVGQ---AIV 505
L+ L + I+ S L MQL G +T R+ F N Q L + I G+ A++
Sbjct: 674 LLLLFLFIIIFSLLGMQLFGGK--FNFDETQTKRSTFDNFPQALLTVFQILTGEDWNAVM 731
Query: 506 YVMTGMYGEPSEIGAGVCLLIIIQLVCG 589
Y YG PS G VC+ II +CG
Sbjct: 732 YDGIMAYGGPSSSGMIVCIYFIILFICG 759
>D43747-1|BAA07804.1| 2170|Homo sapiens voltage-dependent calcium
channel alpha1 subunit, CACN4 protein.
Length = 2170
Score = 32.3 bits (70), Expect = 1.4
Identities = 30/88 (34%), Positives = 41/88 (46%), Gaps = 5/88 (5%)
Frame = +2
Query: 341 LMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDRALF-NGAQKLFGMV-ITVGQ---AIV 505
L+ L + I+ S L MQL G +T R+ F N Q L + I G+ A++
Sbjct: 665 LLLLFLFIIIFSLLGMQLFGGK--FNFDETQTKRSTFDNFPQALLTVFQILTGEDWNAVM 722
Query: 506 YVMTGMYGEPSEIGAGVCLLIIIQLVCG 589
Y YG PS G VC+ II +CG
Sbjct: 723 YDGIMAYGGPSSSGMIVCIYFIILFICG 750
>AB209171-1|BAD92408.1| 1854|Homo sapiens calcium channel,
voltage-dependent, L type, alpha 1D subunit variant
protein.
Length = 1854
Score = 32.3 bits (70), Expect = 1.4
Identities = 30/88 (34%), Positives = 41/88 (46%), Gaps = 5/88 (5%)
Frame = +2
Query: 341 LMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDRALF-NGAQKLFGMV-ITVGQ---AIV 505
L+ L + I+ S L MQL G +T R+ F N Q L + I G+ A++
Sbjct: 347 LLLLFLFIIIFSLLGMQLFGGK--FNFDETQTKRSTFDNFPQALLTVFQILTGEDWNAVM 404
Query: 506 YVMTGMYGEPSEIGAGVCLLIIIQLVCG 589
Y YG PS G VC+ II +CG
Sbjct: 405 YDGIMAYGGPSSSGMIVCIYFIILFICG 432
>U57627-1|AAB03839.2| 901|Homo sapiens ocrl1 protein.
Length = 901
Score = 30.7 bits (66), Expect = 4.4
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
Frame = +1
Query: 193 SIPRESIMDSNH-----IIYFLSMLPDSLIWYNVIRQCRSLLLDP--CNSCIKQ 333
SIP E+I SNH ++ FL LP+ +I Y + ++C DP C I Q
Sbjct: 775 SIP-ETIPGSNHSVAEALLIFLEALPEPVICYELYQRCLDSAYDPRICRQVISQ 827
>U19906-1|AAB19232.1| 418|Homo sapiens arginine vasopressin
receptor 1 protein.
Length = 418
Score = 30.7 bits (66), Expect = 4.4
Identities = 13/42 (30%), Positives = 18/42 (42%)
Frame = +1
Query: 487 CWSGYCLCNDWNVW*TQ*NWCRSVPPHYHTTGLWPVLLCCCS 612
CW+ + + W+VW W S P T L L CC+
Sbjct: 303 CWAPFFIIQMWSVWDPMSVWTESENPTITITALLGSLNSCCN 344
>S73899-1|AAC60638.1| 418|Homo sapiens vascular-type vasopressin
receptor protein.
Length = 418
Score = 30.7 bits (66), Expect = 4.4
Identities = 13/42 (30%), Positives = 18/42 (42%)
Frame = +1
Query: 487 CWSGYCLCNDWNVW*TQ*NWCRSVPPHYHTTGLWPVLLCCCS 612
CW+ + + W+VW W S P T L L CC+
Sbjct: 303 CWAPFFIIQMWSVWDPMSVWTESENPTITITALLGSLNSCCN 344
>M88162-1|AAA59964.2| 968|Homo sapiens Lowe oculocerebrorenal
syndrome protein protein.
Length = 968
Score = 30.7 bits (66), Expect = 4.4
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
Frame = +1
Query: 193 SIPRESIMDSNH-----IIYFLSMLPDSLIWYNVIRQCRSLLLDP--CNSCIKQ 333
SIP E+I SNH ++ FL LP+ +I Y + ++C DP C I Q
Sbjct: 842 SIP-ETIPGSNHSVAEALLIFLEALPEPVICYELYQRCLDSAYDPRICRQVISQ 894
>L25615-1|AAA62271.1| 418|Homo sapiens arginine vasopressin
receptor 1 protein.
Length = 418
Score = 30.7 bits (66), Expect = 4.4
Identities = 13/42 (30%), Positives = 18/42 (42%)
Frame = +1
Query: 487 CWSGYCLCNDWNVW*TQ*NWCRSVPPHYHTTGLWPVLLCCCS 612
CW+ + + W+VW W S P T L L CC+
Sbjct: 303 CWAPFFIIQMWSVWDPMSVWTESENPTITITALLGSLNSCCN 344
>DQ177277-1|ABA02557.1| 418|Homo sapiens arginine vasopressin
receptor 1 protein.
Length = 418
Score = 30.7 bits (66), Expect = 4.4
Identities = 13/42 (30%), Positives = 18/42 (42%)
Frame = +1
Query: 487 CWSGYCLCNDWNVW*TQ*NWCRSVPPHYHTTGLWPVLLCCCS 612
CW+ + + W+VW W S P T L L CC+
Sbjct: 303 CWAPFFIIQMWSVWDPMSVWTESENPTITITALLGSLNSCCN 344
>BC130612-1|AAI30613.1| 893|Homo sapiens oculocerebrorenal syndrome
of Lowe protein.
Length = 893
Score = 30.7 bits (66), Expect = 4.4
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
Frame = +1
Query: 193 SIPRESIMDSNH-----IIYFLSMLPDSLIWYNVIRQCRSLLLDP--CNSCIKQ 333
SIP E+I SNH ++ FL LP+ +I Y + ++C DP C I Q
Sbjct: 767 SIP-ETIPGSNHSVAEALLIFLEALPEPVICYELYQRCLDSAYDPRICRQVISQ 819
>BC094726-1|AAH94726.1| 893|Homo sapiens oculocerebrorenal syndrome
of Lowe protein.
Length = 893
Score = 30.7 bits (66), Expect = 4.4
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
Frame = +1
Query: 193 SIPRESIMDSNH-----IIYFLSMLPDSLIWYNVIRQCRSLLLDP--CNSCIKQ 333
SIP E+I SNH ++ FL LP+ +I Y + ++C DP C I Q
Sbjct: 767 SIP-ETIPGSNHSVAEALLIFLEALPEPVICYELYQRCLDSAYDPRICRQVISQ 819
>BC074804-1|AAH74804.1| 418|Homo sapiens arginine vasopressin
receptor 1A protein.
Length = 418
Score = 30.7 bits (66), Expect = 4.4
Identities = 13/42 (30%), Positives = 18/42 (42%)
Frame = +1
Query: 487 CWSGYCLCNDWNVW*TQ*NWCRSVPPHYHTTGLWPVLLCCCS 612
CW+ + + W+VW W S P T L L CC+
Sbjct: 303 CWAPFFIIQMWSVWDPMSVWTESENPTITITALLGSLNSCCN 344
>BC074803-1|AAH74803.1| 418|Homo sapiens arginine vasopressin
receptor 1A protein.
Length = 418
Score = 30.7 bits (66), Expect = 4.4
Identities = 13/42 (30%), Positives = 18/42 (42%)
Frame = +1
Query: 487 CWSGYCLCNDWNVW*TQ*NWCRSVPPHYHTTGLWPVLLCCCS 612
CW+ + + W+VW W S P T L L CC+
Sbjct: 303 CWAPFFIIQMWSVWDPMSVWTESENPTITITALLGSLNSCCN 344
>AY322550-1|AAP84363.1| 418|Homo sapiens arginine vasopressin
receptor 1A protein.
Length = 418
Score = 30.7 bits (66), Expect = 4.4
Identities = 13/42 (30%), Positives = 18/42 (42%)
Frame = +1
Query: 487 CWSGYCLCNDWNVW*TQ*NWCRSVPPHYHTTGLWPVLLCCCS 612
CW+ + + W+VW W S P T L L CC+
Sbjct: 303 CWAPFFIIQMWSVWDPMSVWTESENPTITITALLGSLNSCCN 344
>AL662877-2|CAI41087.1| 893|Homo sapiens oculocerebrorenal syndrome
of Lowe protein.
Length = 893
Score = 30.7 bits (66), Expect = 4.4
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
Frame = +1
Query: 193 SIPRESIMDSNH-----IIYFLSMLPDSLIWYNVIRQCRSLLLDP--CNSCIKQ 333
SIP E+I SNH ++ FL LP+ +I Y + ++C DP C I Q
Sbjct: 767 SIP-ETIPGSNHSVAEALLIFLEALPEPVICYELYQRCLDSAYDPRICRQVISQ 819
>AL662877-1|CAI41088.1| 901|Homo sapiens oculocerebrorenal syndrome
of Lowe protein.
Length = 901
Score = 30.7 bits (66), Expect = 4.4
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
Frame = +1
Query: 193 SIPRESIMDSNH-----IIYFLSMLPDSLIWYNVIRQCRSLLLDP--CNSCIKQ 333
SIP E+I SNH ++ FL LP+ +I Y + ++C DP C I Q
Sbjct: 775 SIP-ETIPGSNHSVAEALLIFLEALPEPVICYELYQRCLDSAYDPRICRQVISQ 827
>AL138745-5|CAI42615.1| 893|Homo sapiens oculocerebrorenal syndrome
of Lowe protein.
Length = 893
Score = 30.7 bits (66), Expect = 4.4
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
Frame = +1
Query: 193 SIPRESIMDSNH-----IIYFLSMLPDSLIWYNVIRQCRSLLLDP--CNSCIKQ 333
SIP E+I SNH ++ FL LP+ +I Y + ++C DP C I Q
Sbjct: 767 SIP-ETIPGSNHSVAEALLIFLEALPEPVICYELYQRCLDSAYDPRICRQVISQ 819
>AL138745-4|CAI42616.1| 901|Homo sapiens oculocerebrorenal syndrome
of Lowe protein.
Length = 901
Score = 30.7 bits (66), Expect = 4.4
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
Frame = +1
Query: 193 SIPRESIMDSNH-----IIYFLSMLPDSLIWYNVIRQCRSLLLDP--CNSCIKQ 333
SIP E+I SNH ++ FL LP+ +I Y + ++C DP C I Q
Sbjct: 775 SIP-ETIPGSNHSVAEALLIFLEALPEPVICYELYQRCLDSAYDPRICRQVISQ 827
>AL022162-2|CAI95696.1| 893|Homo sapiens oculocerebrorenal syndrome
of Lowe protein.
Length = 893
Score = 30.7 bits (66), Expect = 4.4
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
Frame = +1
Query: 193 SIPRESIMDSNH-----IIYFLSMLPDSLIWYNVIRQCRSLLLDP--CNSCIKQ 333
SIP E+I SNH ++ FL LP+ +I Y + ++C DP C I Q
Sbjct: 767 SIP-ETIPGSNHSVAEALLIFLEALPEPVICYELYQRCLDSAYDPRICRQVISQ 819
>AL022162-1|CAI95695.1| 901|Homo sapiens oculocerebrorenal syndrome
of Lowe protein.
Length = 901
Score = 30.7 bits (66), Expect = 4.4
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
Frame = +1
Query: 193 SIPRESIMDSNH-----IIYFLSMLPDSLIWYNVIRQCRSLLLDP--CNSCIKQ 333
SIP E+I SNH ++ FL LP+ +I Y + ++C DP C I Q
Sbjct: 775 SIP-ETIPGSNHSVAEALLIFLEALPEPVICYELYQRCLDSAYDPRICRQVISQ 827
>AF101725-1|AAD17891.1| 418|Homo sapiens vasopressin receptor
subtype 1a protein.
Length = 418
Score = 30.7 bits (66), Expect = 4.4
Identities = 13/42 (30%), Positives = 18/42 (42%)
Frame = +1
Query: 487 CWSGYCLCNDWNVW*TQ*NWCRSVPPHYHTTGLWPVLLCCCS 612
CW+ + + W+VW W S P T L L CC+
Sbjct: 303 CWAPFFIIQMWSVWDPMSVWTESENPTITITALLGSLNSCCN 344
>AF030625-1|AAC51861.1| 418|Homo sapiens SCCL vasopressin subtype
1a receptor protein.
Length = 418
Score = 30.7 bits (66), Expect = 4.4
Identities = 13/42 (30%), Positives = 18/42 (42%)
Frame = +1
Query: 487 CWSGYCLCNDWNVW*TQ*NWCRSVPPHYHTTGLWPVLLCCCS 612
CW+ + + W+VW W S P T L L CC+
Sbjct: 303 CWAPFFIIQMWSVWDPMSVWTESENPTITITALLGSLNSCCN 344
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,006,335
Number of Sequences: 237096
Number of extensions: 1872182
Number of successful extensions: 3429
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 3344
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3429
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6747805200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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