Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV13f16r
(781 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex det... 29 0.064
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 25 0.60
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 25 0.60
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 25 0.60
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 25 0.60
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 25 0.60
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 25 0.60
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 25 0.60
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 25 0.60
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 24 1.4
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 24 1.4
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 24 1.4
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 24 1.8
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 24 1.8
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 23 4.2
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 23 4.2
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 23 4.2
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 23 4.2
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 23 4.2
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 23 4.2
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 23 4.2
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 23 4.2
>DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex
determiner protein.
Length = 178
Score = 28.7 bits (61), Expect = 0.064
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = -1
Query: 565 IASGTKKTFPLDIYSNYNNITKPPNY*NYILKI 467
I S + Y+NYNN K Y NYI+ I
Sbjct: 81 IISSLSNNYKYSNYNNYNNYNKKLYYKNYIINI 113
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 25.4 bits (53), Expect = 0.60
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -1
Query: 526 YSNYNNITKPPNY*NY 479
YSNYNN NY NY
Sbjct: 91 YSNYNNYNNNNNYNNY 106
Score = 22.6 bits (46), Expect = 4.2
Identities = 11/36 (30%), Positives = 14/36 (38%)
Frame = -1
Query: 565 IASGTKKTFPLDIYSNYNNITKPPNY*NYILKICYV 458
I S + Y+NYNN NY I Y+
Sbjct: 81 IVSSLSNNYNYSNYNNYNNNNNYNNYKKLYYNINYI 116
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 25.4 bits (53), Expect = 0.60
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -1
Query: 526 YSNYNNITKPPNY*NY 479
YSNYNN NY NY
Sbjct: 91 YSNYNNYNNNNNYNNY 106
Score = 22.2 bits (45), Expect = 5.6
Identities = 11/36 (30%), Positives = 14/36 (38%)
Frame = -1
Query: 565 IASGTKKTFPLDIYSNYNNITKPPNY*NYILKICYV 458
I S + Y+NYNN NY I Y+
Sbjct: 81 IISSLSNNYNYSNYNNYNNNNNYNNYKKLYYNINYI 116
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 25.4 bits (53), Expect = 0.60
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -1
Query: 526 YSNYNNITKPPNY*NY 479
YSNYNN NY NY
Sbjct: 91 YSNYNNYNNNNNYNNY 106
Score = 22.2 bits (45), Expect = 5.6
Identities = 11/36 (30%), Positives = 14/36 (38%)
Frame = -1
Query: 565 IASGTKKTFPLDIYSNYNNITKPPNY*NYILKICYV 458
I S + Y+NYNN NY I Y+
Sbjct: 81 IISSLSNNYNYSNYNNYNNNNNYNNYKKLYYNINYI 116
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 25.4 bits (53), Expect = 0.60
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -1
Query: 526 YSNYNNITKPPNY*NY 479
YSNYNN NY NY
Sbjct: 91 YSNYNNYNNNNNYNNY 106
Score = 22.2 bits (45), Expect = 5.6
Identities = 11/36 (30%), Positives = 14/36 (38%)
Frame = -1
Query: 565 IASGTKKTFPLDIYSNYNNITKPPNY*NYILKICYV 458
I S + Y+NYNN NY I Y+
Sbjct: 81 IISSLSNNYNYSNYNNYNNNNNYNNYKKLYYNINYI 116
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 25.4 bits (53), Expect = 0.60
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -1
Query: 526 YSNYNNITKPPNY*NY 479
YSNYNN NY NY
Sbjct: 91 YSNYNNYNNNNNYNNY 106
Score = 22.2 bits (45), Expect = 5.6
Identities = 11/36 (30%), Positives = 14/36 (38%)
Frame = -1
Query: 565 IASGTKKTFPLDIYSNYNNITKPPNY*NYILKICYV 458
I S + Y+NYNN NY I Y+
Sbjct: 81 IISSLSNNYNYSNYNNYNNNNNYNNYKKLYYNINYI 116
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 25.4 bits (53), Expect = 0.60
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -1
Query: 526 YSNYNNITKPPNY*NY 479
YSNYNN NY NY
Sbjct: 91 YSNYNNYNNNNNYNNY 106
Score = 22.2 bits (45), Expect = 5.6
Identities = 11/36 (30%), Positives = 14/36 (38%)
Frame = -1
Query: 565 IASGTKKTFPLDIYSNYNNITKPPNY*NYILKICYV 458
I S + Y+NYNN NY I Y+
Sbjct: 81 IISSLSNNYNYSNYNNYNNNNNYNNYKKLYYNINYI 116
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 25.4 bits (53), Expect = 0.60
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -1
Query: 526 YSNYNNITKPPNY*NY 479
YSNYNN NY NY
Sbjct: 91 YSNYNNYNNNNNYNNY 106
Score = 22.2 bits (45), Expect = 5.6
Identities = 11/36 (30%), Positives = 14/36 (38%)
Frame = -1
Query: 565 IASGTKKTFPLDIYSNYNNITKPPNY*NYILKICYV 458
I S + Y+NYNN NY I Y+
Sbjct: 81 IISSLSNNYNYSNYNNYNNNNNYNNYKKLYYNINYI 116
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 25.4 bits (53), Expect = 0.60
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -1
Query: 526 YSNYNNITKPPNY*NY 479
YSNYNN NY NY
Sbjct: 91 YSNYNNYNNNNNYNNY 106
Score = 22.2 bits (45), Expect = 5.6
Identities = 11/36 (30%), Positives = 14/36 (38%)
Frame = -1
Query: 565 IASGTKKTFPLDIYSNYNNITKPPNY*NYILKICYV 458
I S + Y+NYNN NY I Y+
Sbjct: 81 IISSLSNNYNYSNYNNYNNNNNYNNYKKLYYNINYI 116
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 24.2 bits (50), Expect = 1.4
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = -1
Query: 532 DIYSNYNNITKPPNY*NYILKICYVL 455
D+ SNYN + +P + +L++C L
Sbjct: 35 DLLSNYNKLVRPVVNTSDVLRVCIKL 60
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 24.2 bits (50), Expect = 1.4
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = -1
Query: 532 DIYSNYNNITKPPNY*NYILKICYVL 455
D+ SNYN + +P + +L++C L
Sbjct: 35 DLLSNYNKLVRPVVNTSDVLRVCIKL 60
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 24.2 bits (50), Expect = 1.4
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -1
Query: 523 SNYNNITKPPNY*NYILKI 467
+NYNN K Y NYI+ I
Sbjct: 336 NNYNNYNKKLYYKNYIINI 354
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.8 bits (49), Expect = 1.8
Identities = 12/21 (57%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
Frame = -1
Query: 526 YSNYNNITKPPNY-*NYILKI 467
Y+NYNN KP +Y NYI +I
Sbjct: 324 YNNYNNNYKPLHYNINYIEQI 344
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 23.8 bits (49), Expect = 1.8
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -1
Query: 520 NYNNITKPPNY*NYILKI 467
NYNN K Y NYI+ I
Sbjct: 332 NYNNYNKKLYYKNYIINI 349
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.6 bits (46), Expect = 4.2
Identities = 12/21 (57%), Positives = 14/21 (66%), Gaps = 1/21 (4%)
Frame = -1
Query: 526 YSNYNNITKPPNY-*NYILKI 467
Y+NYNN KP Y NYI +I
Sbjct: 91 YNNYNNNYKPLYYNINYIEQI 111
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.6 bits (46), Expect = 4.2
Identities = 12/21 (57%), Positives = 14/21 (66%), Gaps = 1/21 (4%)
Frame = -1
Query: 526 YSNYNNITKPPNY-*NYILKI 467
Y+NYNN KP Y NYI +I
Sbjct: 91 YNNYNNNYKPLYYNINYIEQI 111
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.6 bits (46), Expect = 4.2
Identities = 12/21 (57%), Positives = 14/21 (66%), Gaps = 1/21 (4%)
Frame = -1
Query: 526 YSNYNNITKPPNY-*NYILKI 467
Y+NYNN KP Y NYI +I
Sbjct: 91 YNNYNNNYKPLYYNINYIEQI 111
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.6 bits (46), Expect = 4.2
Identities = 12/21 (57%), Positives = 14/21 (66%), Gaps = 1/21 (4%)
Frame = -1
Query: 526 YSNYNNITKPPNY-*NYILKI 467
Y+NYNN KP Y NYI +I
Sbjct: 91 YNNYNNNYKPLYYNINYIEQI 111
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.6 bits (46), Expect = 4.2
Identities = 12/21 (57%), Positives = 14/21 (66%), Gaps = 1/21 (4%)
Frame = -1
Query: 526 YSNYNNITKPPNY-*NYILKI 467
Y+NYNN KP Y NYI +I
Sbjct: 324 YNNYNNNYKPLYYNINYIEQI 344
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.6 bits (46), Expect = 4.2
Identities = 12/21 (57%), Positives = 14/21 (66%), Gaps = 1/21 (4%)
Frame = -1
Query: 526 YSNYNNITKPPNY-*NYILKI 467
Y+NYNN KP Y NYI +I
Sbjct: 324 YNNYNNNYKPLYYNINYIEQI 344
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.6 bits (46), Expect = 4.2
Identities = 12/21 (57%), Positives = 14/21 (66%), Gaps = 1/21 (4%)
Frame = -1
Query: 526 YSNYNNITKPPNY-*NYILKI 467
Y+NYNN KP Y NYI +I
Sbjct: 324 YNNYNNNYKPLYYNINYIEQI 344
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 22.6 bits (46), Expect = 4.2
Identities = 12/21 (57%), Positives = 14/21 (66%), Gaps = 1/21 (4%)
Frame = -1
Query: 526 YSNYNNITKPPNY-*NYILKI 467
Y+NYNN KP Y NYI +I
Sbjct: 313 YNNYNNNYKPLYYNINYIEQI 333
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,142
Number of Sequences: 438
Number of extensions: 4120
Number of successful extensions: 34
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24518154
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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