Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV13f16f
         (636 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    30   0.016
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    30   0.016
DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.              27   0.20 
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    21   7.6  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    21   7.6  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   7.6  

>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 30.3 bits (65), Expect = 0.016
 Identities = 24/76 (31%), Positives = 40/76 (52%)
 Frame = +2

Query: 251 ESNEIDVAYIGALNPDHYNISKLFLENGKHVLCEKPLCLNYKQAESLIRFAKNKKLFLME 430
           E ++ +V    +L+ D   I ++ LE  K V C+     NY+ A S I  A NK+LF + 
Sbjct: 189 ERDQSEVESTSSLHSD-MPIERI-LEAEKRVECKMEQQGNYENAVSHICNATNKQLFQLV 246

Query: 431 AVWSRFSPTYIAIEKE 478
           A W++  P + ++  E
Sbjct: 247 A-WAKHIPHFTSLPLE 261


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 30.3 bits (65), Expect = 0.016
 Identities = 24/76 (31%), Positives = 40/76 (52%)
 Frame = +2

Query: 251 ESNEIDVAYIGALNPDHYNISKLFLENGKHVLCEKPLCLNYKQAESLIRFAKNKKLFLME 430
           E ++ +V    +L+ D   I ++ LE  K V C+     NY+ A S I  A NK+LF + 
Sbjct: 189 ERDQSEVESTSSLHSD-MPIERI-LEAEKRVECKMEQQGNYENAVSHICNATNKQLFQLV 246

Query: 431 AVWSRFSPTYIAIEKE 478
           A W++  P + ++  E
Sbjct: 247 A-WAKHIPHFTSLPLE 261


>DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.
          Length = 135

 Score = 26.6 bits (56), Expect = 0.20
 Identities = 16/49 (32%), Positives = 24/49 (48%)
 Frame = +2

Query: 101 KISHDFVNAFNSYPNKGDQVIAAVAARTKPEEFAKLHNIPIVFDSYKAL 247
           KIS D V A  +  N+ DQ++A  +  + P    K+  I   F  YK +
Sbjct: 82  KISSDIVRAVLN-DNEADQLLAECSPISDPNALIKISKILECFFKYKTI 129


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -1

Query: 600 IPMSITELPPNSFFLSLSTVTIGTPKLT 517
           +P     +P    ++SL T   G+PKLT
Sbjct: 83  VPRWRNGIPATLTYISLDTNRGGSPKLT 110


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +1

Query: 352 KTFVFELQTSREPNQVCEE*ETISNGSCLVE 444
           KTF+  ++    P+ +    E I NG CL++
Sbjct: 79  KTFLAVIRYDGVPSSLNVISEKIGNGGCLLQ 109


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
            protein.
          Length = 1143

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 12/56 (21%), Positives = 27/56 (48%)
 Frame = +2

Query: 350  EKPLCLNYKQAESLIRFAKNKKLFLMEAVWSRFSPTYIAIEKEINSGKLGDVMFVE 517
            ++ L L  ++ E ++      K+FL  +  S F  TY+    +  + ++ D++  E
Sbjct: 1010 QRNLDLYRQEKEEMVELGVLDKIFLALSRESGFKKTYVQDLIQAEASQIYDMLVYE 1065


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,423
Number of Sequences: 438
Number of extensions: 4421
Number of successful extensions: 13
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19071468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)