Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV13f11f
         (579 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118520-1|AAM49889.1|  484|Drosophila melanogaster LD17611p pro...    47   2e-05
AE013599-1970|AAX52704.1|  484|Drosophila melanogaster CG33505-P...    47   2e-05
BT011095-1|AAR82761.1|  398|Drosophila melanogaster RE32047p pro...    32   0.49 
AE013599-3730|AAF47100.1|  348|Drosophila melanogaster CG2812-PA...    32   0.49 
AY113244-1|AAM29249.1|  308|Drosophila melanogaster AT12460p pro...    31   1.1  
AE014134-2684|AAF53509.2|  308|Drosophila melanogaster CG4935-PA...    31   1.1  
BT015296-1|AAT94525.1| 1923|Drosophila melanogaster AT26369p pro...    30   2.6  
AY047497-1|AAK77229.1|  922|Drosophila melanogaster GH01043p pro...    30   2.6  
AF181630-1|AAD55416.1| 1228|Drosophila melanogaster BcDNA.GH0492...    30   2.6  
AE014297-2490|AAF55529.1|  922|Drosophila melanogaster CG8064-PA...    30   2.6  
AE013599-2711|AAM68461.1| 1922|Drosophila melanogaster CG30116-P...    30   2.6  
AE013599-2710|AAF57680.2| 1701|Drosophila melanogaster CG30116-P...    30   2.6  
AE013599-2709|AAF57681.2| 1698|Drosophila melanogaster CG30116-P...    30   2.6  
AE013599-2708|AAM68460.1| 1698|Drosophila melanogaster CG30116-P...    30   2.6  
AY050237-1|AAK84936.1|  607|Drosophila melanogaster SD02150p pro...    29   3.4  
AE014298-1514|AAF47966.2|  607|Drosophila melanogaster CG1655-PA...    29   3.4  
AE014296-796|AAF47865.2|  878|Drosophila melanogaster CG1332-PA ...    29   3.4  

>AY118520-1|AAM49889.1|  484|Drosophila melanogaster LD17611p
           protein.
          Length = 484

 Score = 46.8 bits (106), Expect = 2e-05
 Identities = 21/69 (30%), Positives = 41/69 (59%)
 Frame = +3

Query: 366 AVQKRLQRDYLEQRGKLKLELADRYQAPTDSDVKVIRAKEHRLTLTCVCISNDSTLVFTG 545
           +V++RLQ +YL+  GKL+  +A   +A   S  ++++ K H   +  + +S D   ++TG
Sbjct: 121 SVEQRLQTEYLDSVGKLRRNIAGSLKACESS--RILKHKLHHTPICALALSPDGKFLYTG 178

Query: 546 SKCSTIVKW 572
           +K   ++KW
Sbjct: 179 AKSQFLLKW 187


>AE013599-1970|AAX52704.1|  484|Drosophila melanogaster CG33505-PA
           protein.
          Length = 484

 Score = 46.8 bits (106), Expect = 2e-05
 Identities = 21/69 (30%), Positives = 41/69 (59%)
 Frame = +3

Query: 366 AVQKRLQRDYLEQRGKLKLELADRYQAPTDSDVKVIRAKEHRLTLTCVCISNDSTLVFTG 545
           +V++RLQ +YL+  GKL+  +A   +A   S  ++++ K H   +  + +S D   ++TG
Sbjct: 121 SVEQRLQTEYLDSVGKLRRNIAGSLKACESS--RILKHKLHHTPICALALSPDGKFLYTG 178

Query: 546 SKCSTIVKW 572
           +K   ++KW
Sbjct: 179 AKSQFLLKW 187


>BT011095-1|AAR82761.1|  398|Drosophila melanogaster RE32047p
           protein.
          Length = 398

 Score = 32.3 bits (70), Expect = 0.49
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = +3

Query: 474 RAKEHRLTLTCVCISNDSTLVFTGSKCSTI 563
           R K HR ++ C C S D  L+ TGS   TI
Sbjct: 131 RTKHHRGSIYCTCWSRDGELIATGSNDKTI 160


>AE013599-3730|AAF47100.1|  348|Drosophila melanogaster CG2812-PA
           protein.
          Length = 348

 Score = 32.3 bits (70), Expect = 0.49
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = +3

Query: 474 RAKEHRLTLTCVCISNDSTLVFTGSKCSTI 563
           R K HR ++ C C S D  L+ TGS   TI
Sbjct: 81  RTKHHRGSIYCTCWSRDGELIATGSNDKTI 110


>AY113244-1|AAM29249.1|  308|Drosophila melanogaster AT12460p
           protein.
          Length = 308

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 11/37 (29%), Positives = 21/37 (56%)
 Frame = +3

Query: 468 VIRAKEHRLTLTCVCISNDSTLVFTGSKCSTIVKWSI 578
           V R + H   + CVC + DS++  +G + + ++ W I
Sbjct: 94  VRRLRSHAGGVRCVCFNEDSSIAISGGRDNAVMCWDI 130


>AE014134-2684|AAF53509.2|  308|Drosophila melanogaster CG4935-PA
           protein.
          Length = 308

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 11/37 (29%), Positives = 21/37 (56%)
 Frame = +3

Query: 468 VIRAKEHRLTLTCVCISNDSTLVFTGSKCSTIVKWSI 578
           V R + H   + CVC + DS++  +G + + ++ W I
Sbjct: 94  VRRLRSHAGGVRCVCFNEDSSIAISGGRDNAVMCWDI 130


>BT015296-1|AAT94525.1| 1923|Drosophila melanogaster AT26369p protein.
          Length = 1923

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 12/35 (34%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
 Frame = +3

Query: 480  KEHRLTLTCVCIS--NDSTLVFTGSKCSTIVKWSI 578
            K H   +TC+ ++  +DS L+ TGS+ +T++ W +
Sbjct: 936  KGHTAAVTCLLVAPQSDSELLLTGSEDATVLVWHV 970


>AY047497-1|AAK77229.1|  922|Drosophila melanogaster GH01043p
           protein.
          Length = 922

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +3

Query: 486 HRLTLTCVCISNDSTLVFTGSKCSTIVKWSI 578
           H+L + C+ IS DS L+ TGS    +  W +
Sbjct: 580 HKLPVICLDISYDSNLIVTGSADRNVKVWGL 610


>AF181630-1|AAD55416.1| 1228|Drosophila melanogaster BcDNA.GH04922
           protein.
          Length = 1228

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 12/35 (34%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
 Frame = +3

Query: 480 KEHRLTLTCVCIS--NDSTLVFTGSKCSTIVKWSI 578
           K H   +TC+ ++  +DS L+ TGS+ +T++ W +
Sbjct: 466 KGHTAAVTCLLVAPQSDSELLLTGSEDATVLVWHV 500


>AE014297-2490|AAF55529.1|  922|Drosophila melanogaster CG8064-PA
           protein.
          Length = 922

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +3

Query: 486 HRLTLTCVCISNDSTLVFTGSKCSTIVKWSI 578
           H+L + C+ IS DS L+ TGS    +  W +
Sbjct: 580 HKLPVICLDISYDSNLIVTGSADRNVKVWGL 610


>AE013599-2711|AAM68461.1| 1922|Drosophila melanogaster CG30116-PA,
            isoform A protein.
          Length = 1922

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 12/35 (34%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
 Frame = +3

Query: 480  KEHRLTLTCVCIS--NDSTLVFTGSKCSTIVKWSI 578
            K H   +TC+ ++  +DS L+ TGS+ +T++ W +
Sbjct: 936  KGHTAAVTCLLVAPQSDSELLLTGSEDATVLVWHV 970


>AE013599-2710|AAF57680.2| 1701|Drosophila melanogaster CG30116-PD,
            isoform D protein.
          Length = 1701

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 12/35 (34%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
 Frame = +3

Query: 480  KEHRLTLTCVCIS--NDSTLVFTGSKCSTIVKWSI 578
            K H   +TC+ ++  +DS L+ TGS+ +T++ W +
Sbjct: 936  KGHTAAVTCLLVAPQSDSELLLTGSEDATVLVWHV 970


>AE013599-2709|AAF57681.2| 1698|Drosophila melanogaster CG30116-PC,
            isoform C protein.
          Length = 1698

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 12/35 (34%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
 Frame = +3

Query: 480  KEHRLTLTCVCIS--NDSTLVFTGSKCSTIVKWSI 578
            K H   +TC+ ++  +DS L+ TGS+ +T++ W +
Sbjct: 936  KGHTAAVTCLLVAPQSDSELLLTGSEDATVLVWHV 970


>AE013599-2708|AAM68460.1| 1698|Drosophila melanogaster CG30116-PB,
            isoform B protein.
          Length = 1698

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 12/35 (34%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
 Frame = +3

Query: 480  KEHRLTLTCVCIS--NDSTLVFTGSKCSTIVKWSI 578
            K H   +TC+ ++  +DS L+ TGS+ +T++ W +
Sbjct: 936  KGHTAAVTCLLVAPQSDSELLLTGSEDATVLVWHV 970


>AY050237-1|AAK84936.1|  607|Drosophila melanogaster SD02150p
           protein.
          Length = 607

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 16/46 (34%), Positives = 25/46 (54%)
 Frame = +3

Query: 360 DDAVQKRLQRDYLEQRGKLKLELADRYQAPTDSDVKVIRAKEHRLT 497
           D  VQ+    D L Q  K  ++L +  Q  TDS+ +++ A  H+LT
Sbjct: 165 DQRVQRLRDMDELRQNIKRNIKLLE-LQLRTDSEKRLLNADNHKLT 209


>AE014298-1514|AAF47966.2|  607|Drosophila melanogaster CG1655-PA
           protein.
          Length = 607

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 16/46 (34%), Positives = 25/46 (54%)
 Frame = +3

Query: 360 DDAVQKRLQRDYLEQRGKLKLELADRYQAPTDSDVKVIRAKEHRLT 497
           D  VQ+    D L Q  K  ++L +  Q  TDS+ +++ A  H+LT
Sbjct: 165 DQRVQRLRDMDELRQNIKRNIKLLE-LQLRTDSEKRLLNADNHKLT 209


>AE014296-796|AAF47865.2|  878|Drosophila melanogaster CG1332-PA
           protein.
          Length = 878

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = +3

Query: 468 VIRAKEHRLTLTCVCISNDSTLVFTGSKCSTIVKWSI 578
           V     H   +TC+ + N  + + TGS+  T + WSI
Sbjct: 622 VASVTRHLDIITCIALDNCGSYLVTGSRDCTCIVWSI 658


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,057,940
Number of Sequences: 53049
Number of extensions: 269307
Number of successful extensions: 622
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 593
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 620
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2296745289
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)