Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV13f10f
(592 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132860-18|CAB60498.1| 133|Caenorhabditis elegans Hypothetical... 125 3e-29
AF039048-3|AAK68334.1| 246|Caenorhabditis elegans Hypothetical ... 89 3e-18
U00033-7|AAC48302.2| 145|Caenorhabditis elegans Hypothetical pr... 65 4e-11
U70853-1|AAB09143.2| 439|Caenorhabditis elegans Hypothetical pr... 30 1.1
U29488-4|AAL27235.1| 401|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z82069-7|CAB04907.2| 1792|Caenorhabditis elegans Hypothetical pr... 29 1.9
AL132902-15|CAC14425.1| 1792|Caenorhabditis elegans Hypothetical... 29 1.9
Z81521-1|CAB04226.1| 319|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z99280-3|CAE18018.1| 215|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z83317-3|CAB05897.1| 217|Caenorhabditis elegans Hypothetical pr... 28 5.7
U40416-1|AAA81410.2| 822|Caenorhabditis elegans Protein kinase ... 28 5.7
AF403714-1|AAK97497.1| 822|Caenorhabditis elegans serine/threon... 28 5.7
AF024496-1|AAB70339.1| 542|Caenorhabditis elegans Hypothetical ... 28 5.7
Z93779-1|CAB07849.2| 2103|Caenorhabditis elegans Hypothetical pr... 27 7.5
Z81523-6|CAB04244.1| 2586|Caenorhabditis elegans Hypothetical pr... 27 7.5
Z78543-7|CAB01757.2| 2103|Caenorhabditis elegans Hypothetical pr... 27 7.5
Z66566-5|CAA91487.2| 2103|Caenorhabditis elegans Hypothetical pr... 27 7.5
AF024502-7|AAB70377.3| 352|Caenorhabditis elegans Hypothetical ... 27 10.0
>AL132860-18|CAB60498.1| 133|Caenorhabditis elegans Hypothetical
protein Y56A3A.19 protein.
Length = 133
Score = 125 bits (301), Expect = 3e-29
Identities = 63/125 (50%), Positives = 83/125 (66%)
Frame = +3
Query: 147 RTSVTCRLSTVALQQKFSTIKAAVKIYKSQALQNGNEKHGIRKYSGGPPLTLDLIKSRVL 326
R +V+ L TV+++ S ++ L IR+YS PLT ++ R++
Sbjct: 3 RVAVSAALRTVSVRA-LSNASVQQRVITPILLSAQKPSFQIRQYSAKAPLTKKTLEERIV 61
Query: 327 LVLQLYDKINPEQLTVDSHFMNDLGLDSLDHVEVIMAMEDEFGFEIPDGDAERLVRPKDI 506
LVL LYDKI+ ++LT+DS F DLGLDSLDHVEV+MAME+EFGFEIPDGDA+R P+DI
Sbjct: 62 LVLSLYDKIDAKKLTMDSDFSKDLGLDSLDHVEVVMAMEEEFGFEIPDGDADRFKTPRDI 121
Query: 507 VQYIA 521
QYIA
Sbjct: 122 FQYIA 126
>AF039048-3|AAK68334.1| 246|Caenorhabditis elegans Hypothetical
protein F16B4.6 protein.
Length = 246
Score = 88.6 bits (210), Expect = 3e-18
Identities = 43/79 (54%), Positives = 55/79 (69%), Gaps = 1/79 (1%)
Frame = +3
Query: 288 PPLTLDLIKSRVL-LVLQLYDKINPEQLTVDSHFMNDLGLDSLDHVEVIMAMEDEFGFEI 464
P L++ V V+ I+ +LT+DS F DLGLD LDHVEV+MA+E+EFGFEI
Sbjct: 161 PEKAAKLLQKEVFRFVIVTSSAISSTKLTMDSDFSTDLGLDFLDHVEVVMAIEEEFGFEI 220
Query: 465 PDGDAERLVRPKDIVQYIA 521
PDGDA+R P+DI+QYIA
Sbjct: 221 PDGDADRFKTPRDILQYIA 239
>U00033-7|AAC48302.2| 145|Caenorhabditis elegans Hypothetical
protein F37C12.3 protein.
Length = 145
Score = 64.9 bits (151), Expect = 4e-11
Identities = 33/82 (40%), Positives = 51/82 (62%), Gaps = 5/82 (6%)
Frame = +3
Query: 288 PP--LTLDLIKSRVLLVLQLYDKINPEQ---LTVDSHFMNDLGLDSLDHVEVIMAMEDEF 452
PP LT ++ RVL ++ +D+ ++ L +D+ D G DSLD VE++MA+EDEF
Sbjct: 56 PPKQLTFKQVEDRVLKAVRSWDRFPADKESLLKLDADLSKDFGFDSLDQVEIVMALEDEF 115
Query: 453 GFEIPDGDAERLVRPKDIVQYI 518
GFEIP D+++ +D +YI
Sbjct: 116 GFEIPLQDSDKFKTIRDAFKYI 137
>U70853-1|AAB09143.2| 439|Caenorhabditis elegans Hypothetical
protein M01H9.2 protein.
Length = 439
Score = 30.3 bits (65), Expect = 1.1
Identities = 16/35 (45%), Positives = 18/35 (51%)
Frame = +1
Query: 175 PLRCSKSSAQLKPLSKYTKVRPFRMGTRNMVSAST 279
P C K A+LKP SK TK P RN + ST
Sbjct: 78 PRLCGKCYAKLKPDSKRTKTIPVTQFKRNPAATST 112
>U29488-4|AAL27235.1| 401|Caenorhabditis elegans Hypothetical
protein C56C10.7a protein.
Length = 401
Score = 29.9 bits (64), Expect = 1.4
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +3
Query: 384 FMNDLGLDSLDHVEVI-MAMEDEFGFEIPDGDAERLVRPKDIVQYI 518
F+ + LD H V +A EDEFG D +L++PKDI Q++
Sbjct: 205 FLEKVELDPSQHYNVTSIAHEDEFG------DVGKLLKPKDIRQFL 244
>Z82069-7|CAB04907.2| 1792|Caenorhabditis elegans Hypothetical protein
W04A8.7 protein.
Length = 1792
Score = 29.5 bits (63), Expect = 1.9
Identities = 25/96 (26%), Positives = 43/96 (44%)
Frame = +3
Query: 204 IKAAVKIYKSQALQNGNEKHGIRKYSGGPPLTLDLIKSRVLLVLQLYDKINPEQLTVDSH 383
+K A KIY + + NG E K + L+K ++ + +L INP + +
Sbjct: 1644 LKDAEKIYTNSVVFNGAESVYSLKAKEMFEMAEMLVKDQMDTLGELERNINPSAINDAAA 1703
Query: 384 FMNDLGLDSLDHVEVIMAMEDEFGFEIPDGDAERLV 491
L +DS DH++ MED E + D + ++
Sbjct: 1704 AQRGLAMDSDDHMD---EMEDHPTEEEEEDDDDEIM 1736
>AL132902-15|CAC14425.1| 1792|Caenorhabditis elegans Hypothetical
protein W04A8.7 protein.
Length = 1792
Score = 29.5 bits (63), Expect = 1.9
Identities = 25/96 (26%), Positives = 43/96 (44%)
Frame = +3
Query: 204 IKAAVKIYKSQALQNGNEKHGIRKYSGGPPLTLDLIKSRVLLVLQLYDKINPEQLTVDSH 383
+K A KIY + + NG E K + L+K ++ + +L INP + +
Sbjct: 1644 LKDAEKIYTNSVVFNGAESVYSLKAKEMFEMAEMLVKDQMDTLGELERNINPSAINDAAA 1703
Query: 384 FMNDLGLDSLDHVEVIMAMEDEFGFEIPDGDAERLV 491
L +DS DH++ MED E + D + ++
Sbjct: 1704 AQRGLAMDSDDHMD---EMEDHPTEEEEEDDDDEIM 1736
>Z81521-1|CAB04226.1| 319|Caenorhabditis elegans Hypothetical
protein F32A11.1 protein.
Length = 319
Score = 28.7 bits (61), Expect = 3.3
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +2
Query: 230 KSGPSEWERETWYPQVQRWPS 292
+ G WER+TW VQ +PS
Sbjct: 225 RRGVGVWERDTWVESVQSYPS 245
>Z99280-3|CAE18018.1| 215|Caenorhabditis elegans Hypothetical
protein Y57G11B.7 protein.
Length = 215
Score = 27.9 bits (59), Expect = 5.7
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -3
Query: 284 TAVLADTMFLVPILKGLTFVYFDSGFN 204
T ++ TMFL P+ G T VYF G++
Sbjct: 187 TLIICATMFLHPLSMGSTNVYFVPGYH 213
>Z83317-3|CAB05897.1| 217|Caenorhabditis elegans Hypothetical
protein F13G11.2 protein.
Length = 217
Score = 27.9 bits (59), Expect = 5.7
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -3
Query: 284 TAVLADTMFLVPILKGLTFVYFDSGFN 204
T ++ TMFL P+ G T VYF G++
Sbjct: 189 TLIICATMFLHPLSMGSTNVYFVPGYH 215
>U40416-1|AAA81410.2| 822|Caenorhabditis elegans Protein kinase
protein 29 protein.
Length = 822
Score = 27.9 bits (59), Expect = 5.7
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = -2
Query: 183 TQRSKDDMLRTFYTLL--ISVIDHRKHFGKYSQQPFLQAHEMLY 58
T RS DD +R+ L VID K + PF ++HEM+Y
Sbjct: 715 TTRSIDDRVRSIVCTLPFTEVIDELKASLNILKIPFSESHEMVY 758
>AF403714-1|AAK97497.1| 822|Caenorhabditis elegans serine/threonine
kinase KIN-29 protein.
Length = 822
Score = 27.9 bits (59), Expect = 5.7
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = -2
Query: 183 TQRSKDDMLRTFYTLL--ISVIDHRKHFGKYSQQPFLQAHEMLY 58
T RS DD +R+ L VID K + PF ++HEM+Y
Sbjct: 715 TTRSIDDRVRSIVCTLPFTEVIDELKASLNILKIPFSESHEMVY 758
>AF024496-1|AAB70339.1| 542|Caenorhabditis elegans Hypothetical
protein ZC178.1 protein.
Length = 542
Score = 27.9 bits (59), Expect = 5.7
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +3
Query: 405 DSLDHVEVIMAMEDEFGFEIPDGDAERLVR 494
+ LD VE++M++ED G + + D+ LVR
Sbjct: 172 EKLDSVELVMSVEDIIGVVLEELDSVELVR 201
Score = 27.1 bits (57), Expect = 10.0
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +3
Query: 345 DKINPEQLTVDSHFMNDLGLDSLDHVEVIMAMEDEFGFEIPDGDAERLV 491
+K+N +L + + L+ L+ VE++M++ED G D+ LV
Sbjct: 112 EKLNSVELVMSVEDTIGVALEELNSVELVMSVEDTIGVVREKLDSVELV 160
>Z93779-1|CAB07849.2| 2103|Caenorhabditis elegans Hypothetical
protein T25C12.3 protein.
Length = 2103
Score = 27.5 bits (58), Expect = 7.5
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +3
Query: 138 TTYRTSVTCRLSTVALQQKFSTIKAAVKIYKSQALQNGN 254
T Y+T V STV++ Q + I +A IYK +GN
Sbjct: 380 TNYKTLVVIIRSTVSMNQNLNAISSA--IYKELTSNDGN 416
>Z81523-6|CAB04244.1| 2586|Caenorhabditis elegans Hypothetical protein
F32H2.5 protein.
Length = 2586
Score = 27.5 bits (58), Expect = 7.5
Identities = 14/27 (51%), Positives = 20/27 (74%)
Frame = +3
Query: 363 QLTVDSHFMNDLGLDSLDHVEVIMAME 443
QL D++ ++DLGLDSL VE+ A+E
Sbjct: 2207 QLNADAN-LSDLGLDSLMGVEIKQALE 2232
>Z78543-7|CAB01757.2| 2103|Caenorhabditis elegans Hypothetical
protein T25C12.3 protein.
Length = 2103
Score = 27.5 bits (58), Expect = 7.5
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +3
Query: 138 TTYRTSVTCRLSTVALQQKFSTIKAAVKIYKSQALQNGN 254
T Y+T V STV++ Q + I +A IYK +GN
Sbjct: 380 TNYKTLVVIIRSTVSMNQNLNAISSA--IYKELTSNDGN 416
>Z66566-5|CAA91487.2| 2103|Caenorhabditis elegans Hypothetical
protein T25C12.3 protein.
Length = 2103
Score = 27.5 bits (58), Expect = 7.5
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +3
Query: 138 TTYRTSVTCRLSTVALQQKFSTIKAAVKIYKSQALQNGN 254
T Y+T V STV++ Q + I +A IYK +GN
Sbjct: 380 TNYKTLVVIIRSTVSMNQNLNAISSA--IYKELTSNDGN 416
>AF024502-7|AAB70377.3| 352|Caenorhabditis elegans Hypothetical
protein M151.6 protein.
Length = 352
Score = 27.1 bits (57), Expect = 10.0
Identities = 13/45 (28%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Frame = -3
Query: 326 QYSTFYKV*GEGRATAVLADTMFLVP--ILKGLTFVYFDSGFNCA 198
QYS F+ V + +++L++T+F +P +L+ ++F +F + C+
Sbjct: 16 QYSLFHIVMPKYNHSSLLSETLFSLPPNLLEDVSFAFFLNRHGCS 60
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,165,402
Number of Sequences: 27780
Number of extensions: 255558
Number of successful extensions: 759
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 733
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 759
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1247656244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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