Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV13f06r
         (678 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like p...    73   1e-13
U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like p...    62   3e-10
U70848-2|AAB09110.4|  313|Caenorhabditis elegans Trypsin-like pr...    57   1e-08
Z92832-5|CAB07374.2|  292|Caenorhabditis elegans Hypothetical pr...    44   8e-05
U39848-2|AAT81211.1|  279|Caenorhabditis elegans Hypothetical pr...    40   0.002
AF003384-12|AAB54236.2|  331|Caenorhabditis elegans Trypsin-like...    37   0.012
AF098996-1|AAM34815.1|  523|Caenorhabditis elegans Hypothetical ...    31   0.57 
Z78013-9|CAB01420.2|  297|Caenorhabditis elegans Hypothetical pr...    31   0.76 
Z70684-8|CAA94603.2|  360|Caenorhabditis elegans Hypothetical pr...    29   2.3  
U40945-6|AAS80346.1|  437|Caenorhabditis elegans Hypothetical pr...    29   3.0  
U40945-5|AAS80344.1|  617|Caenorhabditis elegans Hypothetical pr...    29   3.0  
Z81038-14|CAI79153.1|  696|Caenorhabditis elegans Hypothetical p...    28   5.3  
Z81038-13|CAB02755.1|  971|Caenorhabditis elegans Hypothetical p...    28   5.3  
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr...    28   5.3  
AF067220-2|AAC16978.1|  588|Caenorhabditis elegans Hypothetical ...    28   5.3  
Z83237-6|CAE17879.1|  549|Caenorhabditis elegans Hypothetical pr...    28   7.0  
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr...    28   7.0  
AF040650-4|AAB95009.2|  291|Caenorhabditis elegans Hypothetical ...    28   7.0  

>U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like
           protease protein 1 protein.
          Length = 293

 Score = 73.3 bits (172), Expect = 1e-13
 Identities = 55/211 (26%), Positives = 98/211 (46%), Gaps = 6/211 (2%)
 Frame = -1

Query: 618 CGASLVTTNRLLTAAHCWFDGTNQXXXXXXXXXXXXLFSGGTRVETSSIVMHPNWSPATI 439
           CG SL+  N +LTAAHC+    ++                G+    +++ +HP ++    
Sbjct: 84  CGGSLIDPNFVLTAAHCF--AKDRRPTSYSVRVGGHRSGSGSPHRVTAVSIHPWYNIGFP 141

Query: 438 RN-DVAVIYLPSPVTLSDTINTIALPSGQELQENFVGSSAVASGFGLTSSSGSITTNQVL 262
            + D A++ +  PV  S T   I LPS   ++        V +G+G T    S++    L
Sbjct: 142 SSYDFAIMRIHPPVNTSTTARPICLPSLPAVENRL----CVVTGWGSTIEGSSLSA-PTL 196

Query: 261 SHVNLDVINNFVCTFAFPFVLQ---SSNLCTS-GRGGVGTCRGDSGGPLVVTRNNRPILI 94
             +++ +++   C+    ++ +    S LC     G + +C+GDSGGPL+  R+    L 
Sbjct: 197 REIHVPLLSTLFCSSLPNYIGRIHLPSMLCAGYSYGKIDSCQGDSGGPLMCARDGHWELT 256

Query: 93  GITSFGSGLGC-QVNLPAAYARVTSFMNFFN 4
           G+ S+  G+GC +  +P  Y  V S   + N
Sbjct: 257 GVVSW--GIGCARPGMPGVYGNVHSASTWIN 285


>U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like
           protease protein 2 protein.
          Length = 265

 Score = 62.5 bits (145), Expect = 3e-10
 Identities = 53/212 (25%), Positives = 89/212 (41%), Gaps = 7/212 (3%)
 Frame = -1

Query: 618 CGASLVTTNRLLTAAHCWFDGTNQXXXXXXXXXXXXLFSGGTR--VETSSIVMHPNWSPA 445
           CGAS++    L+TAAHC+ +                  + G         I  +P +   
Sbjct: 54  CGASILDKTHLITAAHCFEEDERVSSYEVVVGDWDNNQTDGNEQIFYLQRIHFYPLYKDI 113

Query: 444 TIRNDVAVIYLPSP-VTLSDTINTIALPSGQELQENFVGSSAVASGFGLTSSSGSITTNQ 268
              +D+A++ +P P +  ++    I LPS   +     G   V SG+G    S  +   +
Sbjct: 114 -FSHDIAILEIPYPGIEFNEYAQPICLPSKDFVYTP--GRQCVVSGWG----SMGLRYAE 166

Query: 267 VLSHVNLDVINNFVCTFAFPFV--LQSSNLCTSG-RGGVGTCRGDSGGPLVVTRNNRP-I 100
            L    + +IN F C  +      +  S  C     GG+ +C+GDSGGP    R +   +
Sbjct: 167 RLQAALIPIINRFDCVNSSQIYSSMSRSAFCAGYLEGGIDSCQGDSGGPFACRREDGAFV 226

Query: 99  LIGITSFGSGLGCQVNLPAAYARVTSFMNFFN 4
           L G+ S+G G   Q   P  Y  V  ++++ +
Sbjct: 227 LAGVISWGDGC-AQKKQPGIYTMVAPYLSWIS 257


>U70848-2|AAB09110.4|  313|Caenorhabditis elegans Trypsin-like
           protease protein 3 protein.
          Length = 313

 Score = 57.2 bits (132), Expect = 1e-08
 Identities = 54/217 (24%), Positives = 98/217 (45%), Gaps = 15/217 (6%)
 Frame = -1

Query: 621 VCGASLVTTNRLLTAAHCWFDGTNQXXXXXXXXXXXXLFSGGTRVETSSIVMHPNWSPAT 442
           +CGA+++    L+TAAHC      +              S   +       +H  ++  T
Sbjct: 65  LCGATVIDDFWLVTAAHCALQLQTRSFVYVREPKNNRERSFSVK----EAYIHSGYNNQT 120

Query: 441 IRNDVAVIYLPSPVTLSDTINTIALPSGQELQENFVGSSAVASGFGLT---SSSGS--IT 277
             ND+A++ + S ++         +    +L + +   + V  G+GLT    SSG   + 
Sbjct: 121 ADNDIALLRISSDLSKLGIKPVCLVHDDSKLLKQY--KNGVVIGYGLTLGEDSSGEPKLI 178

Query: 276 TNQVLSHVNLDVINNFVCTFAFPFVLQSSNLCT-----SGRGGVGTCRGDSGGPLVVTRN 112
            +Q L   ++ +I++  C   + F+   S   T     +G    GT  GDSGGPL++ ++
Sbjct: 179 NSQTLQSTSVPIISDDDCVKTWRFLSLLSVKITGYQICAGAYLHGTAPGDSGGPLLIHKS 238

Query: 111 N-RPILIGITSFGS----GLGCQVNLPAAYARVTSFM 16
           N   + IGITS+G+    G+  Q   P  Y R++ ++
Sbjct: 239 NGEYVQIGITSYGADGLDGVIDQGKFPGVYTRISKYV 275


>Z92832-5|CAB07374.2|  292|Caenorhabditis elegans Hypothetical
           protein F31D4.6 protein.
          Length = 292

 Score = 44.4 bits (100), Expect = 8e-05
 Identities = 38/146 (26%), Positives = 64/146 (43%), Gaps = 5/146 (3%)
 Frame = -1

Query: 435 NDVAVIYLPSPVTLSDTINTIALPSGQELQENFVGSSAVASGFGLTSSSGSITTNQVLSH 256
           +D A++ +   +  S+ +  I LP        +   S    G+G   +      +++   
Sbjct: 143 HDWAIVEVEKRIHFSENVRPICLPR----PNMYYTKSLAVPGWGRIFNESGPLIHEIPMR 198

Query: 255 VNLDVINNF---VCTFAFPFVLQSSNLCTSGRGGVGTCRGDSGGPLVVTRNN--RPILIG 91
           ++ D    +   +   A  F+  +S +  S      TC GDSGG L    +N  R  LI 
Sbjct: 199 IDRDCKRPWSDRLPADADDFICATS-MNVSNYSAPRTCHGDSGGGLEYRDDNYGRAFLIA 257

Query: 90  ITSFGSGLGCQVNLPAAYARVTSFMN 13
           ITSFG+  GC  N+ A + RV  ++N
Sbjct: 258 ITSFGT-RGCPSNMLARFTRVDMYLN 282


>U39848-2|AAT81211.1|  279|Caenorhabditis elegans Hypothetical
           protein B0286.6 protein.
          Length = 279

 Score = 39.5 bits (88), Expect = 0.002
 Identities = 35/127 (27%), Positives = 55/127 (43%), Gaps = 2/127 (1%)
 Frame = -1

Query: 435 NDVAVIYLPSPVTLSDTINTIALPSGQELQENFVGSSAVASGFGLTSSSGSITTNQVLSH 256
           ND+AV  L  P+  S  I    LPS  ++           +G+ L    G   ++ VL  
Sbjct: 121 NDIAVFELEEPIEFSKDIFPACLPSAPKIPR------IRETGYKLFGY-GRDPSDSVLES 173

Query: 255 VNLDVINNFV--CTFAFPFVLQSSNLCTSGRGGVGTCRGDSGGPLVVTRNNRPILIGITS 82
             L  + +FV  C+  FP+       CTS      +C GDSG  +V T + R + + +  
Sbjct: 174 GKLKSLYSFVAECSDDFPY---GGVYCTSAVNRGLSCDGDSGSGVVRTSDTRNVQVLVGV 230

Query: 81  FGSGLGC 61
             +G+ C
Sbjct: 231 LSAGMPC 237


>AF003384-12|AAB54236.2|  331|Caenorhabditis elegans Trypsin-like
           protease protein 5 protein.
          Length = 331

 Score = 37.1 bits (82), Expect = 0.012
 Identities = 32/126 (25%), Positives = 51/126 (40%), Gaps = 5/126 (3%)
 Frame = -1

Query: 435 NDVAVIYLPSPVTLSDTINTIALPSGQELQENFVGSSAVASGFGLTSSSGSITTNQVLSH 256
           ND+ ++ L S +   +  N   LP    L E  + S A  + FG  S  G    N     
Sbjct: 176 NDIVILELESTIDDVEGANYACLPF---LPEVNIQSGANVTSFGWGSDPGKGFDNAAFPM 232

Query: 255 VNLDVINN---FVCTFAFPFVLQSSNLCTSGRGGVGTCRGDSGGPLVVTRNN--RPILIG 91
           + +  +       C   +   +   + CT+       C GDSGG L   +++  R  +I 
Sbjct: 233 IQVLTLATETLATCEENWGTSIPFDSFCTAEEEDKNVCSGDSGGGLTFHQSDSAREFIIA 292

Query: 90  ITSFGS 73
           I S+GS
Sbjct: 293 IVSYGS 298



 Score = 30.7 bits (66), Expect = 1.00
 Identities = 10/19 (52%), Positives = 15/19 (78%)
 Frame = -1

Query: 621 VCGASLVTTNRLLTAAHCW 565
           +CG +L+T   +LTAAHC+
Sbjct: 61  ICGGTLITLKHVLTAAHCF 79


>AF098996-1|AAM34815.1|  523|Caenorhabditis elegans Hypothetical
           protein T11F1.7 protein.
          Length = 523

 Score = 31.5 bits (68), Expect = 0.57
 Identities = 16/29 (55%), Positives = 21/29 (72%)
 Frame = -1

Query: 312 GFGLTSSSGSITTNQVLSHVNLDVINNFV 226
           G+G TSS  SIT N  L+  N+DVI+NF+
Sbjct: 115 GYGCTSSGLSITNNSQLT--NIDVISNFL 141


>Z78013-9|CAB01420.2|  297|Caenorhabditis elegans Hypothetical
           protein F15B9.5 protein.
          Length = 297

 Score = 31.1 bits (67), Expect = 0.76
 Identities = 43/199 (21%), Positives = 76/199 (38%), Gaps = 14/199 (7%)
 Frame = -1

Query: 627 TGVCGASLVTTNRLLTAAHCWFDGTN---QXXXXXXXXXXXXLFSGGTRVETSSIVMHPN 457
           T VCG  L+  + ++T+AHC F G +                   G     + ++ +   
Sbjct: 43  TNVCGGVLIAPSIVITSAHCVFSGDDFAVTAKVTLGDVHLNKHDDGEQEFRSHAMAISKK 102

Query: 456 W--SPATIRNDVAVIYLPSPVTLSD---TINTIALPSGQELQENFVGSSAVASGFGLTS- 295
           +    +   +DVAVI+LP    +     ++    LPS   +  NF  ++ +      TS 
Sbjct: 103 FFNDASEANDDVAVIFLPQRADVCHSPLSLQIAKLPSTGSV--NFKETAPLTQLQLETSV 160

Query: 294 ---SSGSITTNQVLSHVNLDVINNFVCTFAFPFVLQSSNLCTSG-RGGVGTCRGDSGGPL 127
              +    T N+   +   D +   +   +   + +   L      G    C GDSG P+
Sbjct: 161 CYVAGWGKTENKTAKY--SDSVRQMMVNLSVRRIGKRKYLIAKAVTGSSRACMGDSGSPV 218

Query: 126 VVTRNNRPILIG-ITSFGS 73
               N + IL+G +   GS
Sbjct: 219 YCFVNGKRILVGTVAHIGS 237


>Z70684-8|CAA94603.2|  360|Caenorhabditis elegans Hypothetical
           protein F28D1.8 protein.
          Length = 360

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 17/75 (22%), Positives = 28/75 (37%)
 Frame = -1

Query: 498 GTRVETSSIVMHPNWSPATIRNDVAVIYLPSPVTLSDTINTIALPSGQELQENFVGSSAV 319
           G R     ++  PN      + D  V   P+P   + T     +  G    E  V +   
Sbjct: 187 GNRSTIMILLQKPNTMKEKEKEDQKVSNNPAPAASASTEGATTVTEGTTAAETTVATETT 246

Query: 318 ASGFGLTSSSGSITT 274
           A+G G T ++ +  T
Sbjct: 247 ATGTGTTEAAATTVT 261


>U40945-6|AAS80346.1|  437|Caenorhabditis elegans Hypothetical
           protein F10D7.5c protein.
          Length = 437

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 18/57 (31%), Positives = 26/57 (45%)
 Frame = +2

Query: 500 PLKSVTEPRTTVTLVPWLVPSNQQ*AAVNSLLVVTSEAPQTPVRGCPLTTMVISXPP 670
           P  S T P T   L+  ++PS     A  ++L  +S   + P R  P TT  +  PP
Sbjct: 303 PALSTTRP-TIDDLLGEIIPSTPPPVAPRAVLGSSSSTSRLPNRSSPATTTAMMSPP 358


>U40945-5|AAS80344.1|  617|Caenorhabditis elegans Hypothetical
           protein F10D7.5a protein.
          Length = 617

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 18/57 (31%), Positives = 26/57 (45%)
 Frame = +2

Query: 500 PLKSVTEPRTTVTLVPWLVPSNQQ*AAVNSLLVVTSEAPQTPVRGCPLTTMVISXPP 670
           P  S T P T   L+  ++PS     A  ++L  +S   + P R  P TT  +  PP
Sbjct: 483 PALSTTRP-TIDDLLGEIIPSTPPPVAPRAVLGSSSSTSRLPNRSSPATTTAMMSPP 538


>Z81038-14|CAI79153.1|  696|Caenorhabditis elegans Hypothetical
           protein C25A1.10b protein.
          Length = 696

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 15/68 (22%), Positives = 31/68 (45%)
 Frame = +1

Query: 418 NDGHIITNGSRRPIRMHYNRTGLNSGATAEECHGTKNDRYARALVGAIEPAVSSCQ*SVS 597
           +DG +  NG ++P+ +   ++       AE    + +D  A+ L    +PA +  Q   +
Sbjct: 87  DDGAVKKNGVQKPVNVAAKKSATPVQKKAESSSSSDSDAPAKKLTPVKKPAQTPAQKKAA 146

Query: 598 GNKRSSAD 621
            +  S +D
Sbjct: 147 SSSDSDSD 154


>Z81038-13|CAB02755.1|  971|Caenorhabditis elegans Hypothetical
           protein C25A1.10a protein.
          Length = 971

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 15/68 (22%), Positives = 31/68 (45%)
 Frame = +1

Query: 418 NDGHIITNGSRRPIRMHYNRTGLNSGATAEECHGTKNDRYARALVGAIEPAVSSCQ*SVS 597
           +DG +  NG ++P+ +   ++       AE    + +D  A+ L    +PA +  Q   +
Sbjct: 87  DDGAVKKNGVQKPVNVAAKKSATPVQKKAESSSSSDSDAPAKKLTPVKKPAQTPAQKKAA 146

Query: 598 GNKRSSAD 621
            +  S +D
Sbjct: 147 SSSDSDSD 154


>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
            K06A9.1b protein.
          Length = 2232

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 38/162 (23%), Positives = 57/162 (35%), Gaps = 9/162 (5%)
 Frame = -1

Query: 501  GGTRV--ETSSIVMHPNWSPATIRNDVAVIYLPSPVTLSDTINT---IALPSGQELQENF 337
            G T++   T S V  P+    +      +    S  T   +++T   I+  + Q +  N 
Sbjct: 1153 GSTQIPGSTGSTVTQPSTGSGSTSTSGEITSQGSTQTPRSSLSTSPAISTSTQQSVSTNS 1212

Query: 336  VGSSAVASGF--GLTSSSGSITTNQV--LSHVNLDVINNFVCTFAFPFVLQSSNLCTSGR 169
             GS+        G TSS  ++TT      S        +   +   P   QS N  TSG 
Sbjct: 1213 PGSTVTQPSTVRGSTSSGSTVTTGSTEGSSTSGSSSATSLSSSSPVPSTSQSPNPSTSGS 1272

Query: 168  GGVGTCRGDSGGPLVVTRNNRPILIGITSFGSGLGCQVNLPA 43
                     S  P+V T        G T   S +G  V  P+
Sbjct: 1273 STPTPNPSQSTSPVVSTTTGEMTSHGSTQTPSTIGSTVTQPS 1314


>AF067220-2|AAC16978.1|  588|Caenorhabditis elegans Hypothetical
           protein C33E10.5 protein.
          Length = 588

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 16/50 (32%), Positives = 23/50 (46%)
 Frame = +2

Query: 23  DVTRAYAAGKFTWQPRPEPNDVIPIKIGRLFLVTTRGPPESPRQVPTPPR 172
           +V R  A     W+    PN +  I+   LF V++ GP  S R +   PR
Sbjct: 309 NVCRMEAMFSLWWETPCVPNVIPRIEPAMLFPVSSSGPSSSERDISPLPR 358


>Z83237-6|CAE17879.1|  549|Caenorhabditis elegans Hypothetical
           protein R06B9.6 protein.
          Length = 549

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = -2

Query: 452 LLLPFVMMWPSFTYPVPLLCLIQSIR 375
           ++L F + W S TY +P L LI  +R
Sbjct: 285 VILDFPIEWISLTYRIPFLLLISDLR 310


>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
           protein T07D4.4a protein.
          Length = 1022

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 28/134 (20%), Positives = 57/134 (42%)
 Frame = -1

Query: 414 LPSPVTLSDTINTIALPSGQELQENFVGSSAVASGFGLTSSSGSITTNQVLSHVNLDVIN 235
           + SP T   +  +  + +    +E+F   S+ ++G    SSS S + ++ ++       N
Sbjct: 233 MKSPATTGGSFGSSTVVASIRSEESFGIKSSASAGGSFNSSSASASQSRTVASFGSKPSN 292

Query: 234 NFVCTFAFPFVLQSSNLCTSGRGGVGTCRGDSGGPLVVTRNNRPILIGITSFGSGLGCQV 55
             + + +    L SS+ C + +    T  G S G    + +++P      SFG   G   
Sbjct: 293 ENISSNS--SALSSSSSCFAAK-PTSTSAGGSFGNQPSSFSSKP------SFGGAFGAST 343

Query: 54  NLPAAYARVTSFMN 13
           ++  + +   SF N
Sbjct: 344 SVTGSSSMGGSFGN 357


>AF040650-4|AAB95009.2|  291|Caenorhabditis elegans Hypothetical
           protein T04B8.3 protein.
          Length = 291

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = +2

Query: 152 QVPTPPRPLVHKFEDCKTKGKANVQTKLFITSRFT 256
           ++   P PL H + + K KGK +V    + T +FT
Sbjct: 188 ELEAEPFPLYHIYGNTKAKGKMHVLVAPYSTQKFT 222


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,092,050
Number of Sequences: 27780
Number of extensions: 372152
Number of successful extensions: 1394
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1261
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1390
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1539654388
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)