Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV13f03f
         (637 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z22930-7|CAA80512.1|  274|Anopheles gambiae trypsin protein.           26   0.87 
Z18889-1|CAA79327.1|  274|Anopheles gambiae trypsin protein.           26   0.87 
AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic acetylch...    23   8.1  

>Z22930-7|CAA80512.1|  274|Anopheles gambiae trypsin protein.
          Length = 274

 Score = 26.2 bits (55), Expect = 0.87
 Identities = 13/50 (26%), Positives = 20/50 (40%)
 Frame = +1

Query: 463 PEFNDVPLYIYGQSYGGKMAIDMGLRMHEAEKAGTIRSNLKGIAMGNAWI 612
           P F+  P Y  GQ   G   ID+    ++       R N  G  + + W+
Sbjct: 34  PSFSPRPRYAVGQRIVGGFEIDVSDAPYQVSLQYNKRHNCGGSVLSSKWV 83


>Z18889-1|CAA79327.1|  274|Anopheles gambiae trypsin protein.
          Length = 274

 Score = 26.2 bits (55), Expect = 0.87
 Identities = 13/50 (26%), Positives = 20/50 (40%)
 Frame = +1

Query: 463 PEFNDVPLYIYGQSYGGKMAIDMGLRMHEAEKAGTIRSNLKGIAMGNAWI 612
           P F+  P Y  GQ   G   ID+    ++       R N  G  + + W+
Sbjct: 34  PSFSPRPRYAVGQRIVGGFEIDVSDAPYQVSLQYNKRHNCGGSVLSSKWV 83


>AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 5 protein.
          Length = 533

 Score = 23.0 bits (47), Expect = 8.1
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -2

Query: 213 EWTFSIFLYWSCCV 172
           +W   IFLYW  C+
Sbjct: 345 DWVRVIFLYWLPCI 358


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 665,673
Number of Sequences: 2352
Number of extensions: 12698
Number of successful extensions: 15
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62305095
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)