Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV13f02f
         (513 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL009194-2|CAA15701.1|  103|Drosophila melanogaster EG:152A3.7 p...   116   2e-26
AE014298-349|AAF45739.1|  103|Drosophila melanogaster CG3621-PA ...   116   2e-26
AY071663-1|AAL49285.1|  103|Drosophila melanogaster RE75088p pro...   113   2e-25
AY119449-1|AAM50103.1|  145|Drosophila melanogaster AT13913p pro...    86   2e-17
AE014296-3682|AAF51837.1|  145|Drosophila melanogaster CG6914-PA...    86   2e-17
AE014134-2328|AAF53283.3|  708|Drosophila melanogaster CG16970-P...    31   0.69 
BT023937-1|ABB36441.1|  968|Drosophila melanogaster RE13936p pro...    29   2.8  
AJ251887-1|CAB64940.1| 1095|Drosophila melanogaster ionotropic g...    29   2.8  
AJ251886-1|CAB64939.1| 1095|Drosophila melanogaster ionotropic g...    29   2.8  
AE014296-1603|AAF50306.2| 1095|Drosophila melanogaster CG4481-PA...    29   2.8  
M20230-1|AAA28721.1| 1501|Drosophila melanogaster protein ( D.me...    28   8.5  
J03131-1|AAA28718.1| 1501|Drosophila melanogaster protein ( D.me...    28   8.5  
AE014298-2965|AAF45377.1|  738|Drosophila melanogaster CG15322-P...    28   8.5  
AE014134-1263|AAF52504.3| 1501|Drosophila melanogaster CG5125-PB...    28   8.5  

>AL009194-2|CAA15701.1|  103|Drosophila melanogaster EG:152A3.7
           protein.
          Length = 103

 Score =  116 bits (278), Expect = 2e-26
 Identities = 53/98 (54%), Positives = 68/98 (69%)
 Frame = +2

Query: 89  RDISPALQAFRNFLLGRKHTNALRFEPLVSARTQPPPEIPDGPSHKHAHNYYYTRDARRE 268
           RD+SP +Q  R FLLGR+H  ALRFE  ++ RTQP PEIPDGPSH  + NYY  RD RRE
Sbjct: 6   RDVSPLIQRIRAFLLGREHNLALRFEDGLADRTQPQPEIPDGPSHLLSANYYCQRDGRRE 65

Query: 269 VAPPIDVTKELLSASSDKGAPKQAANVRPTPGHLYAWD 382
           V PPID+ ++    +++  A K  ++  PTPG +YAWD
Sbjct: 66  VLPPIDLVEQQKQLAAEGEAAKAPSSKLPTPGKVYAWD 103


>AE014298-349|AAF45739.1|  103|Drosophila melanogaster CG3621-PA
           protein.
          Length = 103

 Score =  116 bits (278), Expect = 2e-26
 Identities = 53/98 (54%), Positives = 68/98 (69%)
 Frame = +2

Query: 89  RDISPALQAFRNFLLGRKHTNALRFEPLVSARTQPPPEIPDGPSHKHAHNYYYTRDARRE 268
           RD+SP +Q  R FLLGR+H  ALRFE  ++ RTQP PEIPDGPSH  + NYY  RD RRE
Sbjct: 6   RDVSPLIQRIRAFLLGREHNLALRFEDGLADRTQPQPEIPDGPSHLLSANYYCQRDGRRE 65

Query: 269 VAPPIDVTKELLSASSDKGAPKQAANVRPTPGHLYAWD 382
           V PPID+ ++    +++  A K  ++  PTPG +YAWD
Sbjct: 66  VLPPIDLVEQQKQLAAEGEAAKAPSSKLPTPGKVYAWD 103


>AY071663-1|AAL49285.1|  103|Drosophila melanogaster RE75088p
           protein.
          Length = 103

 Score =  113 bits (271), Expect = 2e-25
 Identities = 52/98 (53%), Positives = 67/98 (68%)
 Frame = +2

Query: 89  RDISPALQAFRNFLLGRKHTNALRFEPLVSARTQPPPEIPDGPSHKHAHNYYYTRDARRE 268
           RD+SP +Q  R FLLGR+H  ALRFE  ++ RTQP PEIPDGPSH  + NYY  RD R E
Sbjct: 6   RDVSPLIQRIRAFLLGREHNLALRFEDGLADRTQPQPEIPDGPSHLLSANYYCQRDGRLE 65

Query: 269 VAPPIDVTKELLSASSDKGAPKQAANVRPTPGHLYAWD 382
           V PPID+ ++    +++  A K  ++  PTPG +YAWD
Sbjct: 66  VLPPIDLVEQQKQLAAEGEAAKAPSSKLPTPGKVYAWD 103


>AY119449-1|AAM50103.1|  145|Drosophila melanogaster AT13913p
           protein.
          Length = 145

 Score = 86.2 bits (204), Expect = 2e-17
 Identities = 43/85 (50%), Positives = 52/85 (61%)
 Frame = +2

Query: 89  RDISPALQAFRNFLLGRKHTNALRFEPLVSARTQPPPEIPDGPSHKHAHNYYYTRDARRE 268
           RD++  L   RNFLLGR H  A RF  +VS RTQPPP IP GP+     NYYYTRD RR 
Sbjct: 8   RDVAGFLSRVRNFLLGRTHKTAHRFADMVSPRTQPPPNIPSGPTQSLFANYYYTRDPRRL 67

Query: 269 VAPPIDVTKELLSASSDKGAPKQAA 343
           V P +DV +E     + K   ++AA
Sbjct: 68  VKPFVDVVQEHKKMLTAKVKEEEAA 92


>AE014296-3682|AAF51837.1|  145|Drosophila melanogaster CG6914-PA
           protein.
          Length = 145

 Score = 86.2 bits (204), Expect = 2e-17
 Identities = 43/85 (50%), Positives = 52/85 (61%)
 Frame = +2

Query: 89  RDISPALQAFRNFLLGRKHTNALRFEPLVSARTQPPPEIPDGPSHKHAHNYYYTRDARRE 268
           RD++  L   RNFLLGR H  A RF  +VS RTQPPP IP GP+     NYYYTRD RR 
Sbjct: 8   RDVAGFLSRVRNFLLGRTHKTAHRFADMVSPRTQPPPNIPSGPTQSLFANYYYTRDPRRL 67

Query: 269 VAPPIDVTKELLSASSDKGAPKQAA 343
           V P +DV +E     + K   ++AA
Sbjct: 68  VKPFVDVVQEHKKMLTAKVKEEEAA 92


>AE014134-2328|AAF53283.3|  708|Drosophila melanogaster CG16970-PA
           protein.
          Length = 708

 Score = 31.5 bits (68), Expect = 0.69
 Identities = 21/67 (31%), Positives = 31/67 (46%)
 Frame = +2

Query: 128 LLGRKHTNALRFEPLVSARTQPPPEIPDGPSHKHAHNYYYTRDARREVAPPIDVTKELLS 307
           LL    T+     PL      PPP  P  PS   A +YY++  + R V PP+  T   ++
Sbjct: 256 LLASAGTSPGYLPPLAIPAALPPP--PPAPSV--ATDYYFSSRSTRTVPPPVPPTPAAVA 311

Query: 308 ASSDKGA 328
           A++   A
Sbjct: 312 AAASASA 318


>BT023937-1|ABB36441.1|  968|Drosophila melanogaster RE13936p
           protein.
          Length = 968

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
 Frame = -3

Query: 241 VVVGMLVRGSVWDFWRR--LGPSRNQW--LKTKSVCMLPTKEE 125
           V  G L+ GS WDF+RR  +G     W  + ++    +PT +E
Sbjct: 684 VQYGTLLHGSTWDFFRRSQIGLHNKMWEYMNSRKHVFVPTYDE 726


>AJ251887-1|CAB64940.1| 1095|Drosophila melanogaster ionotropic
           glutamate receptorsubunit IB protein.
          Length = 1095

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
 Frame = -3

Query: 241 VVVGMLVRGSVWDFWRR--LGPSRNQW--LKTKSVCMLPTKEE 125
           V  G L+ GS WDF+RR  +G     W  + ++    +PT +E
Sbjct: 811 VQYGTLLHGSTWDFFRRSQIGLHNKMWEYMNSRKHVFVPTYDE 853


>AJ251886-1|CAB64939.1| 1095|Drosophila melanogaster ionotropic
           glutamate receptorsubunit IB protein.
          Length = 1095

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
 Frame = -3

Query: 241 VVVGMLVRGSVWDFWRR--LGPSRNQW--LKTKSVCMLPTKEE 125
           V  G L+ GS WDF+RR  +G     W  + ++    +PT +E
Sbjct: 811 VQYGTLLHGSTWDFFRRSQIGLHNKMWEYMNSRKHVFVPTYDE 853


>AE014296-1603|AAF50306.2| 1095|Drosophila melanogaster CG4481-PA
           protein.
          Length = 1095

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
 Frame = -3

Query: 241 VVVGMLVRGSVWDFWRR--LGPSRNQW--LKTKSVCMLPTKEE 125
           V  G L+ GS WDF+RR  +G     W  + ++    +PT +E
Sbjct: 811 VQYGTLLHGSTWDFFRRSQIGLHNKMWEYMNSRKHVFVPTYDE 853


>M20230-1|AAA28721.1| 1501|Drosophila melanogaster protein (
            D.melanogaster ninaCencoded long protein mRNA, complete
            cds. ).
          Length = 1501

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 13/50 (26%), Positives = 24/50 (48%)
 Frame = +2

Query: 176  SARTQPPPEIPDGPSHKHAHNYYYTRDARREVAPPIDVTKELLSASSDKG 325
            +A   PPP +P    +++  N       +R   PP D  +EL + + ++G
Sbjct: 1325 AAPPPPPPPMPSSNYYRNNPNQQQRNYQQRSSYPPSDPVRELQNMARNEG 1374


>J03131-1|AAA28718.1| 1501|Drosophila melanogaster protein (
            D.melanogaster ninaCprotein genes, complete cds. ).
          Length = 1501

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 13/50 (26%), Positives = 24/50 (48%)
 Frame = +2

Query: 176  SARTQPPPEIPDGPSHKHAHNYYYTRDARREVAPPIDVTKELLSASSDKG 325
            +A   PPP +P    +++  N       +R   PP D  +EL + + ++G
Sbjct: 1325 AAPPPPPPPMPSSNYYRNNPNQQQRNYQQRSSYPPSDPVRELQNMARNEG 1374


>AE014298-2965|AAF45377.1|  738|Drosophila melanogaster CG15322-PA
           protein.
          Length = 738

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 18/72 (25%), Positives = 30/72 (41%)
 Frame = +2

Query: 164 EPLVSARTQPPPEIPDGPSHKHAHNYYYTRDARREVAPPIDVTKELLSASSDKGAPKQAA 343
           +P V A+   PP  P  PS++ A   Y  +       P I +  + +     +  P+Q+ 
Sbjct: 369 QPAVYAKVAAPPAPPAPPSYQPAQLIYQPQAQAHHHQPQIQLQLQRIFLQPPQ--PQQST 426

Query: 344 NVRPTPGHLYAW 379
                P  LYA+
Sbjct: 427 IYAEQPAPLYAY 438


>AE014134-1263|AAF52504.3| 1501|Drosophila melanogaster CG5125-PB,
            isoform B protein.
          Length = 1501

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 13/50 (26%), Positives = 24/50 (48%)
 Frame = +2

Query: 176  SARTQPPPEIPDGPSHKHAHNYYYTRDARREVAPPIDVTKELLSASSDKG 325
            +A   PPP +P    +++  N       +R   PP D  +EL + + ++G
Sbjct: 1325 AAPPPPPPPMPSSNYYRNNPNQQQRNYQQRSSYPPSDPVRELQNMARNEG 1374


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,230,016
Number of Sequences: 53049
Number of extensions: 475646
Number of successful extensions: 1630
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1569
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1623
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1867000320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)