Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV13f01r
         (341 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.               25   0.25 
AY217747-1|AAP45005.1|  246|Apis mellifera short-chain dehydroge...    23   0.77 
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    20   9.5  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          20   9.5  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    20   9.5  

>DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.
          Length = 132

 Score = 25.0 bits (52), Expect = 0.25
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +3

Query: 9  YIFFFILRY*SPFRYYLRCELLRDCRQ 89
          Y FFFIL     F Y+   ++ +DCR+
Sbjct: 5  YHFFFILVITLIFLYFGEADIKKDCRK 31


>AY217747-1|AAP45005.1|  246|Apis mellifera short-chain
           dehydrogenase/reductase protein.
          Length = 246

 Score = 23.4 bits (48), Expect = 0.77
 Identities = 12/39 (30%), Positives = 22/39 (56%)
 Frame = +1

Query: 55  IYDVNSSGIVVNDVDSSGIIVNYVDSSGIIVNYVDSSGI 171
           I+D+N  G+     +   ++     ++GIIVN  D+SG+
Sbjct: 111 IFDINLLGLTCMIQEVLKLMKKKGINNGIIVNINDASGL 149


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -3

Query: 195 GVHIVDNNNPGGVYVVDD 142
           G +I +NN P G+ + +D
Sbjct: 44  GDYIEENNMPNGMQIWND 61


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -3

Query: 213 ADDNPGGVHIVDNNNPGGVY 154
           A+DN  G    +NNN G ++
Sbjct: 254 ANDNGNGNGASNNNNNGDMF 273


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +1

Query: 79  IVVNDVDSSGIIVNYVDSSGIIVNY 153
           + +N    + IIV+   S   IVNY
Sbjct: 548 VAINIPGDTSIIVDSSTSGATIVNY 572


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,884
Number of Sequences: 438
Number of extensions: 1719
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7839909
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)