Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV13f01f
         (391 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK129565-1|BAC85184.1|  195|Homo sapiens protein ( Homo sapiens ...    49   6e-06

>AK129565-1|BAC85184.1|  195|Homo sapiens protein ( Homo sapiens
           cDNA FLJ26054 fis, clone PRS03205. ).
          Length = 195

 Score = 48.8 bits (111), Expect = 6e-06
 Identities = 23/65 (35%), Positives = 47/65 (72%)
 Frame = -3

Query: 290 IIYDVNSSGIVVNDVDSSGIIVNYVDSSGIIVNYVDSSGIIVVHDVDSSGIIVRNIDSTR 111
           ++  V+S  ++V++VDS  ++V+ VDS  ++V+ VDS  I+V  +VDS  ++V ++DS +
Sbjct: 102 LVSSVDSIKVLVSNVDSIDVLVSSVDSIDVLVSSVDSINILVC-NVDSIHVLVSSVDSIK 160

Query: 110 IILNS 96
           ++++S
Sbjct: 161 VLVSS 165



 Score = 48.4 bits (110), Expect = 8e-06
 Identities = 24/65 (36%), Positives = 44/65 (67%)
 Frame = -3

Query: 290 IIYDVNSSGIVVNDVDSSGIIVNYVDSSGIIVNYVDSSGIIVVHDVDSSGIIVRNIDSTR 111
           ++  V+S  ++V+ VDS  ++V+ VDS  ++V+ VDS  ++ V  VDS  I+V N+DS  
Sbjct: 92  LVSSVDSIHVLVSSVDSIKVLVSNVDSIDVLVSSVDSIDVL-VSSVDSINILVCNVDSIH 150

Query: 110 IILNS 96
           ++++S
Sbjct: 151 VLVSS 155



 Score = 46.4 bits (105), Expect = 3e-05
 Identities = 21/65 (32%), Positives = 43/65 (66%)
 Frame = -3

Query: 290 IIYDVNSSGIVVNDVDSSGIIVNYVDSSGIIVNYVDSSGIIVVHDVDSSGIIVRNIDSTR 111
           ++Y V+S  ++ + VDS  ++V+ VDS  ++V+ VDS  ++ V  +DS   +V ++DS  
Sbjct: 42  LVYSVDSIHVLTSSVDSIDLLVSNVDSIHVLVSNVDSIKVL-VSSIDSINFLVSSVDSIH 100

Query: 110 IILNS 96
           ++++S
Sbjct: 101 VLVSS 105



 Score = 46.0 bits (104), Expect = 4e-05
 Identities = 25/69 (36%), Positives = 46/69 (66%)
 Frame = -3

Query: 290 IIYDVNSSGIVVNDVDSSGIIVNYVDSSGIIVNYVDSSGIIVVHDVDSSGIIVRNIDSTR 111
           ++ +V+S  ++V+ VDS  ++V+ VDS  I+V  VDS  ++V   VDS  ++V ++DS  
Sbjct: 112 LVSNVDSIDVLVSSVDSIDVLVSSVDSINILVCNVDSIHVLV-SSVDSIKVLVSSVDSID 170

Query: 110 IILNSR*TI 84
           ++++S  TI
Sbjct: 171 VLVSSVDTI 179



 Score = 45.2 bits (102), Expect = 8e-05
 Identities = 22/75 (29%), Positives = 48/75 (64%)
 Frame = -3

Query: 320 LFYDINRPFGIIYDVNSSGIVVNDVDSSGIIVNYVDSSGIIVNYVDSSGIIVVHDVDSSG 141
           L Y ++    +   V+S  ++V++VDS  ++V+ VDS  ++V+ +DS   + V  VDS  
Sbjct: 42  LVYSVDSIHVLTSSVDSIDLLVSNVDSIHVLVSNVDSIKVLVSSIDSINFL-VSSVDSIH 100

Query: 140 IIVRNIDSTRIILNS 96
           ++V ++DS ++++++
Sbjct: 101 VLVSSVDSIKVLVSN 115



 Score = 43.6 bits (98), Expect = 2e-04
 Identities = 21/65 (32%), Positives = 44/65 (67%)
 Frame = -3

Query: 290 IIYDVNSSGIVVNDVDSSGIIVNYVDSSGIIVNYVDSSGIIVVHDVDSSGIIVRNIDSTR 111
           ++  V+S  ++V+ VDS  ++++ VDS  I+V+ VDS  I+ V+ VDS  ++  ++DS  
Sbjct: 2   LVSSVDSIKVLVSSVDSIDVLLSSVDSIDILVSSVDSINIL-VYSVDSIHVLTSSVDSID 60

Query: 110 IILNS 96
           +++++
Sbjct: 61  LLVSN 65



 Score = 43.6 bits (98), Expect = 2e-04
 Identities = 21/63 (33%), Positives = 41/63 (65%)
 Frame = -3

Query: 290 IIYDVNSSGIVVNDVDSSGIIVNYVDSSGIIVNYVDSSGIIVVHDVDSSGIIVRNIDSTR 111
           ++  ++S   +V+ VDS  ++V+ VDS  ++V+ VDS  ++ V  VDS  ++V ++DS  
Sbjct: 82  LVSSIDSINFLVSSVDSIHVLVSSVDSIKVLVSNVDSIDVL-VSSVDSIDVLVSSVDSIN 140

Query: 110 IIL 102
           I++
Sbjct: 141 ILV 143



 Score = 43.2 bits (97), Expect = 3e-04
 Identities = 23/65 (35%), Positives = 42/65 (64%)
 Frame = -3

Query: 290 IIYDVNSSGIVVNDVDSSGIIVNYVDSSGIIVNYVDSSGIIVVHDVDSSGIIVRNIDSTR 111
           ++  V+S  I+V  VDS  ++ + VDS  ++V+ VDS  ++ V +VDS  ++V +IDS  
Sbjct: 32  LVSSVDSINILVYSVDSIHVLTSSVDSIDLLVSNVDSIHVL-VSNVDSIKVLVSSIDSIN 90

Query: 110 IILNS 96
            +++S
Sbjct: 91  FLVSS 95



 Score = 41.1 bits (92), Expect = 0.001
 Identities = 21/56 (37%), Positives = 38/56 (67%)
 Frame = -3

Query: 263 IVVNDVDSSGIIVNYVDSSGIIVNYVDSSGIIVVHDVDSSGIIVRNIDSTRIILNS 96
           ++V+ VDS  ++V+ VDS  ++++ VDS  I+ V  VDS  I+V ++DS  ++ +S
Sbjct: 1   MLVSSVDSIKVLVSSVDSIDVLLSSVDSIDIL-VSSVDSINILVYSVDSIHVLTSS 55



 Score = 41.1 bits (92), Expect = 0.001
 Identities = 22/59 (37%), Positives = 40/59 (67%)
 Frame = -3

Query: 290 IIYDVNSSGIVVNDVDSSGIIVNYVDSSGIIVNYVDSSGIIVVHDVDSSGIIVRNIDST 114
           ++  V+S  I+V +VDS  ++V+ VDS  ++V+ VDS  ++ V  VD+  I+V ++DS+
Sbjct: 132 LVSSVDSINILVCNVDSIHVLVSSVDSIKVLVSSVDSIDVL-VSSVDTIKILVSSVDSS 189


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,076,408
Number of Sequences: 237096
Number of extensions: 1071451
Number of successful extensions: 6899
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 6043
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6842
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2698607930
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)