Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV13e23f
         (602 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...   209   2e-56
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.   188   4e-50
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...   188   4e-50
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...   184   8e-49
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    21   7.0  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   7.0  
DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated...    21   9.3  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       21   9.3  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   9.3  

>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score =  209 bits (510), Expect = 2e-56
 Identities = 91/177 (51%), Positives = 131/177 (74%)
 Frame = +3

Query: 72  TVCLLSLLFVACSGIIIKNGEVQDWWETSILYQIYPRSFADSDGDGIGDLNGITSKLEYI 251
           T+  ++ L +A S I   +    +W++ +++YQIYPRSF DSDGDGIGDLNGIT+++++I
Sbjct: 5   TIVTVACLLLAASPIDCVDA---NWYKNALVYQIYPRSFQDSDGDGIGDLNGITARMDHI 61

Query: 252 KELGVGAVWLSPIFKSPMVDFGYDIANFYEIHHEYGTMEDFEALLKKANELDIKVVLDLV 431
            ++G  A+WLSPI+KSP VDFGYDI+NF ++   YGT+ DF+ L+++A  L +KV+LD V
Sbjct: 62  ADIGADALWLSPIYKSPQVDFGYDISNFTDVDPVYGTLADFDRLVRRAKSLGLKVILDFV 121

Query: 432 PNHTSNESVWFQEALNGNEKYYNYFVWEDGIIDENGNRQPPNNWLSHFRGSAWEYKE 602
           PNH+S+E  WF++++   + Y  Y+VW D  I  NG RQPPNNWLS F GSAW++ E
Sbjct: 122 PNHSSHEHPWFKKSVQRIKPYDEYYVWRDARI-VNGTRQPPNNWLSVFWGSAWQWNE 177


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score =  188 bits (458), Expect = 4e-50
 Identities = 80/151 (52%), Positives = 108/151 (71%)
 Frame = +3

Query: 150 ETSILYQIYPRSFADSDGDGIGDLNGITSKLEYIKELGVGAVWLSPIFKSPMVDFGYDIA 329
           E  I+YQ+YPRSF DS+GDGIGD+ GI  KL++  E+GV   WLSPI+ SPMVDFGYDI+
Sbjct: 28  EDLIVYQVYPRSFKDSNGDGIGDIEGIKEKLDHFLEMGVDMFWLSPIYPSPMVDFGYDIS 87

Query: 330 NFYEIHHEYGTMEDFEALLKKANELDIKVVLDLVPNHTSNESVWFQEALNGNEKYYNYFV 509
           N+ ++H  +GT+ D + L+  A+E  +K++LD VPNHTS++  WFQ +L   E Y NY++
Sbjct: 88  NYTDVHPIFGTISDLDNLVSAAHEKGLKIILDFVPNHTSDQHEWFQLSLKNIEPYNNYYI 147

Query: 510 WEDGIIDENGNRQPPNNWLSHFRGSAWEYKE 602
           W  G I  NG R PP NW+  F GSAW ++E
Sbjct: 148 WHPGKI-VNGKRVPPTNWVGVFGGSAWSWRE 177


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score =  188 bits (458), Expect = 4e-50
 Identities = 80/151 (52%), Positives = 108/151 (71%)
 Frame = +3

Query: 150 ETSILYQIYPRSFADSDGDGIGDLNGITSKLEYIKELGVGAVWLSPIFKSPMVDFGYDIA 329
           E  I+YQ+YPRSF DS+GDGIGD+ GI  KL++  E+GV   WLSPI+ SPMVDFGYDI+
Sbjct: 28  EDLIVYQVYPRSFKDSNGDGIGDIEGIKEKLDHFLEMGVDMFWLSPIYPSPMVDFGYDIS 87

Query: 330 NFYEIHHEYGTMEDFEALLKKANELDIKVVLDLVPNHTSNESVWFQEALNGNEKYYNYFV 509
           N+ ++H  +GT+ D + L+  A+E  +K++LD VPNHTS++  WFQ +L   E Y NY++
Sbjct: 88  NYTDVHPIFGTISDLDNLVSAAHEKGLKIILDFVPNHTSDQHEWFQLSLKNIEPYNNYYI 147

Query: 510 WEDGIIDENGNRQPPNNWLSHFRGSAWEYKE 602
           W  G I  NG R PP NW+  F GSAW ++E
Sbjct: 148 WHPGKI-VNGKRVPPTNWVGVFGGSAWSWRE 177


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score =  184 bits (447), Expect = 8e-49
 Identities = 86/187 (45%), Positives = 123/187 (65%), Gaps = 8/187 (4%)
 Frame = +3

Query: 66  MKTVCLLSLLFVACSGIIIKNGEVQDWWETSILYQIYPRSFADSDGDGIGDLNGITSKLE 245
           MK++ ++ LL     G    N   + WW+ +I YQ+YPRSF DS+ DGIGDL GI  KL 
Sbjct: 1   MKSLVVVVLLLAVGLGAGQNN---KGWWKNAIFYQVYPRSFMDSNSDGIGDLKGIKDKLS 57

Query: 246 YIKELGVGAVWLSPIFKSPMVDFGYDIANFYEIHHEYGTMEDFEALLKKANELDIKVVLD 425
           +  E G+ A+WLSPI +SPMVDFGYDI++F ++   +GT++D E L  +A + ++KV+LD
Sbjct: 58  HFIESGITAIWLSPINRSPMVDFGYDISDFKDVDPIFGTIKDLEDLTAEAKKQNLKVILD 117

Query: 426 LVPNHTSNESVWFQEAL-----NGNEKYYNYFVWEDGIIDENGN---RQPPNNWLSHFRG 581
           LVPNHTS++  WFQ ++     N   KY +Y++W D + D+ GN    + PNNWLS F G
Sbjct: 118 LVPNHTSDQHKWFQMSINNTNNNNTNKYKDYYIWVDPVKDDKGNPIKDKYPNNWLSVFNG 177

Query: 582 SAWEYKE 602
           + W + E
Sbjct: 178 TGWTFHE 184


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +3

Query: 318 YDIANFYEIHHEYGTMEDFEALLKKANELDIK 413
           Y+I NF +  H       ++ + K  N LDI+
Sbjct: 400 YEILNFRKSEHNGTNGYQYQVVGKWFNSLDIR 431


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +3

Query: 318 YDIANFYEIHHEYGTMEDFEALLKKANELDIK 413
           Y+I NF +  H       ++ + K  N LDI+
Sbjct: 490 YEILNFRKSEHNGTNGYQYQVVGKWFNSLDIR 521


>DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 510

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = -2

Query: 229 IPFKSPIPSPSLSAKDLG*IW 167
           + F  PI S SLS K L  IW
Sbjct: 98  LSFLGPIKSLSLSIKMLERIW 118


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -3

Query: 213 QYHRRRYQQKTLGRSGIKLKSPT 145
           ++++RR Q+      G+  KSPT
Sbjct: 579 EFYKRRPQRACSTTGGVPSKSPT 601


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
 Frame = -2

Query: 316 PKSTMGDLKIGESQTAPTPNSLIYSNF-EVIPFKSPIPSPSLSAKDLG 176
           P  T+  LK G+S   P P +L  +N  ++ P+ S +   +L+A+  G
Sbjct: 639 PPLTISWLKDGQS-PFPLPPNLASANISQLDPYSSLLSITNLAAEHSG 685


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,802
Number of Sequences: 438
Number of extensions: 4114
Number of successful extensions: 17
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17726685
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)