Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV13d21f
(641 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014298-3064|AAF50873.1| 1223|Drosophila melanogaster CG12092-P... 101 1e-21
BT009977-1|AAQ22446.1| 1287|Drosophila melanogaster RE56428p pro... 92 7e-19
AJ249606-1|CAB56505.1| 1287|Drosophila melanogaster NPC1 protein... 92 7e-19
AE014134-1780|AAF52874.2| 1287|Drosophila melanogaster CG5722-PA... 92 7e-19
AF262977-1|AAF76150.1| 5233|Drosophila melanogaster highwire pro... 31 1.3
AE014298-2087|AAF48411.3| 5233|Drosophila melanogaster CG32592-P... 31 1.3
AY089289-1|AAL90027.1| 278|Drosophila melanogaster AT08432p pro... 29 4.1
AE013599-1591|AAF58451.1| 291|Drosophila melanogaster CG17575-P... 29 4.1
Y07964-1|CAA69262.1| 275|Drosophila melanogaster N-acetyltransf... 28 9.4
BT016086-1|AAV36971.1| 730|Drosophila melanogaster LD44003p pro... 28 9.4
AY118780-1|AAM50640.1| 240|Drosophila melanogaster GH12636p pro... 28 9.4
AE014298-658|AAF45971.2| 714|Drosophila melanogaster CG15473-PA... 28 9.4
AE014297-1048|AAF54457.1| 730|Drosophila melanogaster CG9467-PA... 28 9.4
AE013599-3828|AAM68307.1| 240|Drosophila melanogaster CG3318-PA... 28 9.4
AE013599-3827|AAF47172.1| 275|Drosophila melanogaster CG3318-PB... 28 9.4
>AE014298-3064|AAF50873.1| 1223|Drosophila melanogaster CG12092-PA
protein.
Length = 1223
Score = 101 bits (241), Expect = 1e-21
Identities = 47/125 (37%), Positives = 70/125 (56%), Gaps = 1/125 (0%)
Frame = +2
Query: 263 ILTERCPSLVFDENGDKKPFNEILTCCEPVQIRKLSESLMLADGILGRCPTCLRNFARQI 442
I +RCP L + G+ +E+ CC+ QI + L ADG+ RCPTC RN A +
Sbjct: 26 IFAKRCPMLYKEYKGESGE-DELSLCCDAAQIETMESGLSQADGVFSRCPTCTRNMALTV 84
Query: 443 CEMNCSPDQSRFVDVYTEVS-GGVRYVNEIDYRLYEPFMLGAHASCAGVIIPQTGLPAIN 619
C M C+ + + F+ Y + + GV YV IDYRL + + + SC G+ QTG PA++
Sbjct: 85 CAMTCAKNHTLFLTAYNDTNDAGVDYVKYIDYRLTDDTVSKIYNSCIGIQHTQTGRPAMD 144
Query: 620 MMCGN 634
+ CG+
Sbjct: 145 LGCGS 149
>BT009977-1|AAQ22446.1| 1287|Drosophila melanogaster RE56428p
protein.
Length = 1287
Score = 91.9 bits (218), Expect = 7e-19
Identities = 57/188 (30%), Positives = 95/188 (50%), Gaps = 3/188 (1%)
Frame = +2
Query: 77 YKMNFFITLVLVFLYTSDVKAKCRFRGEC-IEIAGHAKPCPVDIEARPVVEGLSPADAEE 253
+ ++ I VL L S K C + G C H++ CP + A+ + A +
Sbjct: 12 FGVHILIAAVLFTLIQSS-KQDCVWYGVCNTNDFSHSQNCPYNGTAKEM--------ATD 62
Query: 254 IVDILTERCPSLVFDENGDKKPFNEILTCCEPVQIRKLSESLMLADGILGRCPTCLRNFA 433
+++L +RC L+ EN + K CC+ Q+ L++++ LA IL RCP+C+ N
Sbjct: 63 GLELLKKRCGFLL--ENSENK------FCCDKNQVELLNKNVELAGNILDRCPSCMENLV 114
Query: 434 RQICEMNCSPDQSRFVDVYTEVSG--GVRYVNEIDYRLYEPFMLGAHASCAGVIIPQTGL 607
R IC+ CSP Q+ F+ V G Y++ +D + ++ + SC+ V +PQTG
Sbjct: 115 RHICQFTCSPKQAEFMHVVATQKNKKGDEYISSVDLHISTEYINKTYKSCSQVSVPQTGQ 174
Query: 608 PAINMMCG 631
A ++MCG
Sbjct: 175 LAFDLMCG 182
>AJ249606-1|CAB56505.1| 1287|Drosophila melanogaster NPC1 protein
protein.
Length = 1287
Score = 91.9 bits (218), Expect = 7e-19
Identities = 57/188 (30%), Positives = 95/188 (50%), Gaps = 3/188 (1%)
Frame = +2
Query: 77 YKMNFFITLVLVFLYTSDVKAKCRFRGEC-IEIAGHAKPCPVDIEARPVVEGLSPADAEE 253
+ ++ I VL L S K C + G C H++ CP + A+ + A +
Sbjct: 12 FGVHILIAAVLFTLIQSS-KQDCVWYGVCNTNDFSHSQNCPYNGTAKEM--------ATD 62
Query: 254 IVDILTERCPSLVFDENGDKKPFNEILTCCEPVQIRKLSESLMLADGILGRCPTCLRNFA 433
+++L +RC L+ EN + K CC+ Q+ L++++ LA IL RCP+C+ N
Sbjct: 63 GLELLKKRCGFLL--ENSENK------FCCDKNQVELLNKNVELAGNILDRCPSCMENLV 114
Query: 434 RQICEMNCSPDQSRFVDVYTEVSG--GVRYVNEIDYRLYEPFMLGAHASCAGVIIPQTGL 607
R IC+ CSP Q+ F+ V G Y++ +D + ++ + SC+ V +PQTG
Sbjct: 115 RHICQFTCSPKQAEFMHVVATQKNKKGDEYISSVDLHISTEYINKTYKSCSQVSVPQTGQ 174
Query: 608 PAINMMCG 631
A ++MCG
Sbjct: 175 LAFDLMCG 182
>AE014134-1780|AAF52874.2| 1287|Drosophila melanogaster CG5722-PA
protein.
Length = 1287
Score = 91.9 bits (218), Expect = 7e-19
Identities = 57/188 (30%), Positives = 95/188 (50%), Gaps = 3/188 (1%)
Frame = +2
Query: 77 YKMNFFITLVLVFLYTSDVKAKCRFRGEC-IEIAGHAKPCPVDIEARPVVEGLSPADAEE 253
+ ++ I VL L S K C + G C H++ CP + A+ + A +
Sbjct: 12 FGVHILIAAVLFTLIQSS-KQDCVWYGVCNTNDFSHSQNCPYNGTAKEM--------ATD 62
Query: 254 IVDILTERCPSLVFDENGDKKPFNEILTCCEPVQIRKLSESLMLADGILGRCPTCLRNFA 433
+++L +RC L+ EN + K CC+ Q+ L++++ LA IL RCP+C+ N
Sbjct: 63 GLELLKKRCGFLL--ENSENK------FCCDKNQVELLNKNVELAGNILDRCPSCMENLV 114
Query: 434 RQICEMNCSPDQSRFVDVYTEVSG--GVRYVNEIDYRLYEPFMLGAHASCAGVIIPQTGL 607
R IC+ CSP Q+ F+ V G Y++ +D + ++ + SC+ V +PQTG
Sbjct: 115 RHICQFTCSPKQAEFMHVVATQKNKKGDEYISSVDLHISTEYINKTYKSCSQVSVPQTGQ 174
Query: 608 PAINMMCG 631
A ++MCG
Sbjct: 175 LAFDLMCG 182
>AF262977-1|AAF76150.1| 5233|Drosophila melanogaster highwire protein.
Length = 5233
Score = 31.1 bits (67), Expect = 1.3
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = -3
Query: 273 SVKMSTISSASAGDSPSTTGLASISTGQG 187
SV + ISSAS+G +PST+ A+++ G G
Sbjct: 1736 SVAPAMISSASSGGAPSTSASAAVAPGSG 1764
>AE014298-2087|AAF48411.3| 5233|Drosophila melanogaster CG32592-PA
protein.
Length = 5233
Score = 31.1 bits (67), Expect = 1.3
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = -3
Query: 273 SVKMSTISSASAGDSPSTTGLASISTGQG 187
SV + ISSAS+G +PST+ A+++ G G
Sbjct: 1736 SVAPAMISSASSGGAPSTSASAAVAPGSG 1764
>AY089289-1|AAL90027.1| 278|Drosophila melanogaster AT08432p
protein.
Length = 278
Score = 29.5 bits (63), Expect = 4.1
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = -1
Query: 521 SHIGHLLILQCRHQRNEIDQENSSSHKFVWRNFLSMLD-NGPGY 393
+H+G ++ Q ++ NE Q SS H+++ NF+ D N P Y
Sbjct: 198 THVGCGILRQTKNTTNEAGQSLSSVHQYMTCNFVRTNDVNAPVY 241
>AE013599-1591|AAF58451.1| 291|Drosophila melanogaster CG17575-PA
protein.
Length = 291
Score = 29.5 bits (63), Expect = 4.1
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = -1
Query: 521 SHIGHLLILQCRHQRNEIDQENSSSHKFVWRNFLSMLD-NGPGY 393
+H+G ++ Q ++ NE Q SS H+++ NF+ D N P Y
Sbjct: 211 THVGCGILRQTKNTTNEAGQSLSSVHQYMTCNFVRTNDVNAPVY 254
>Y07964-1|CAA69262.1| 275|Drosophila melanogaster
N-acetyltransferase protein.
Length = 275
Score = 28.3 bits (60), Expect = 9.4
Identities = 10/37 (27%), Positives = 20/37 (54%)
Frame = +2
Query: 158 ECIEIAGHAKPCPVDIEARPVVEGLSPADAEEIVDIL 268
+ + ++G CPVD + +E + P D E ++ +L
Sbjct: 38 DALTVSGKPAACPVDQDCPYTIELIQPEDGEAVIAML 74
>BT016086-1|AAV36971.1| 730|Drosophila melanogaster LD44003p
protein.
Length = 730
Score = 28.3 bits (60), Expect = 9.4
Identities = 15/59 (25%), Positives = 31/59 (52%)
Frame = -3
Query: 411 GQRPRIPSANIKLSDSFLIWTGSQQVKISLNGFLSPFSSKTRLGHLSVKMSTISSASAG 235
GQ+ + + N+ + +L + GSQ V +S +G + + + T+ + + +S SAG
Sbjct: 322 GQKTDVGTFNLNVRVEYLFFIGSQLVALSSSGKIGVWHAMTQHWQIQDLVPVLSFDSAG 380
>AY118780-1|AAM50640.1| 240|Drosophila melanogaster GH12636p
protein.
Length = 240
Score = 28.3 bits (60), Expect = 9.4
Identities = 10/37 (27%), Positives = 20/37 (54%)
Frame = +2
Query: 158 ECIEIAGHAKPCPVDIEARPVVEGLSPADAEEIVDIL 268
+ + ++G CPVD + +E + P D E ++ +L
Sbjct: 3 DALTVSGKPAACPVDQDCPYTIELIQPEDGEAVIAML 39
>AE014298-658|AAF45971.2| 714|Drosophila melanogaster CG15473-PA
protein.
Length = 714
Score = 28.3 bits (60), Expect = 9.4
Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 4/39 (10%)
Frame = +2
Query: 215 PVVEGLSPADAEEIVDILTE----RCPSLVFDENGDKKP 319
P+ L PA ++E+V++LT+ R S+ ENG++ P
Sbjct: 660 PLASPLPPAPSKEVVEVLTQKSVSRSVSIKVGENGEEIP 698
>AE014297-1048|AAF54457.1| 730|Drosophila melanogaster CG9467-PA
protein.
Length = 730
Score = 28.3 bits (60), Expect = 9.4
Identities = 15/59 (25%), Positives = 31/59 (52%)
Frame = -3
Query: 411 GQRPRIPSANIKLSDSFLIWTGSQQVKISLNGFLSPFSSKTRLGHLSVKMSTISSASAG 235
GQ+ + + N+ + +L + GSQ V +S +G + + + T+ + + +S SAG
Sbjct: 322 GQKTDVGTFNLNVRVEYLFFIGSQLVALSSSGKIGVWHAMTQHWQIQDLVPVLSFDSAG 380
>AE013599-3828|AAM68307.1| 240|Drosophila melanogaster CG3318-PA,
isoform A protein.
Length = 240
Score = 28.3 bits (60), Expect = 9.4
Identities = 10/37 (27%), Positives = 20/37 (54%)
Frame = +2
Query: 158 ECIEIAGHAKPCPVDIEARPVVEGLSPADAEEIVDIL 268
+ + ++G CPVD + +E + P D E ++ +L
Sbjct: 3 DALTVSGKPAACPVDQDCPYTIELIQPEDGEAVIAML 39
>AE013599-3827|AAF47172.1| 275|Drosophila melanogaster CG3318-PB,
isoform B protein.
Length = 275
Score = 28.3 bits (60), Expect = 9.4
Identities = 10/37 (27%), Positives = 20/37 (54%)
Frame = +2
Query: 158 ECIEIAGHAKPCPVDIEARPVVEGLSPADAEEIVDIL 268
+ + ++G CPVD + +E + P D E ++ +L
Sbjct: 38 DALTVSGKPAACPVDQDCPYTIELIQPEDGEAVIAML 74
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,479,303
Number of Sequences: 53049
Number of extensions: 634332
Number of successful extensions: 1827
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1746
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1823
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2703623850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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