Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV13d17f
         (572 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L32839-1|AAA28414.1|  389|Drosophila melanogaster cell division ...   118   6e-27
BT004828-1|AAO45184.1|  389|Drosophila melanogaster SD25413p pro...   118   6e-27
AE014296-359|AAF47571.1|  389|Drosophila melanogaster CG12019-PA...   118   6e-27
AY064174-1|AAL47186.1| 1984|Drosophila melanogaster rho GTPase g...    29   4.5  
AY061553-1|AAL29101.1|  595|Drosophila melanogaster LP08894p pro...    29   4.5  
AE014297-1757|AAF54987.1|  595|Drosophila melanogaster CG9307-PA...    29   4.5  
AE014296-900|AAF47940.2| 1984|Drosophila melanogaster CG32239-PA...    29   4.5  

>L32839-1|AAA28414.1|  389|Drosophila melanogaster cell division
           cycle 37 protein protein.
          Length = 389

 Score =  118 bits (284), Expect = 6e-27
 Identities = 63/140 (45%), Positives = 74/140 (52%)
 Frame = +3

Query: 153 MVDYSKWKDIEISDDEDETHPNIDTPSLFRWRHXXXXXXXXXXXXXXXXXXXXXXXXXXX 332
           MVDYSKWK+IEISDDED+THPNIDTPSLFRWRH                           
Sbjct: 1   MVDYSKWKNIEISDDEDDTHPNIDTPSLFRWRHQARVERMAEMDHEKDELKKKRQSYQAR 60

Query: 333 LTETRKKISEADADSPNLNSLKKTXXXXXXXXXXXXXXXXXXXXXXXHTPWNVDTISEPG 512
           L + +++IS+ D D     +LKK                         TPWNVDTIS+PG
Sbjct: 61  LMDVKERISKKDGDE---EALKKELEKIEAEGKELDRIESEMIKKEKKTPWNVDTISKPG 117

Query: 513 FNKTVINTKALRPSNENLTE 572
           F KTVIN KA R  +ENL+E
Sbjct: 118 FEKTVINKKAGRKPDENLSE 137


>BT004828-1|AAO45184.1|  389|Drosophila melanogaster SD25413p
           protein.
          Length = 389

 Score =  118 bits (284), Expect = 6e-27
 Identities = 63/140 (45%), Positives = 74/140 (52%)
 Frame = +3

Query: 153 MVDYSKWKDIEISDDEDETHPNIDTPSLFRWRHXXXXXXXXXXXXXXXXXXXXXXXXXXX 332
           MVDYSKWK+IEISDDED+THPNIDTPSLFRWRH                           
Sbjct: 1   MVDYSKWKNIEISDDEDDTHPNIDTPSLFRWRHQARVERMAEMDHEKDELKKKRQSYQAR 60

Query: 333 LTETRKKISEADADSPNLNSLKKTXXXXXXXXXXXXXXXXXXXXXXXHTPWNVDTISEPG 512
           L + +++IS+ D D     +LKK                         TPWNVDTIS+PG
Sbjct: 61  LMDVKERISKKDGDE---EALKKELEKIEAEGKELDRIESEMIKKEKKTPWNVDTISKPG 117

Query: 513 FNKTVINTKALRPSNENLTE 572
           F KTVIN KA R  +ENL+E
Sbjct: 118 FEKTVINKKAGRKPDENLSE 137


>AE014296-359|AAF47571.1|  389|Drosophila melanogaster CG12019-PA
           protein.
          Length = 389

 Score =  118 bits (284), Expect = 6e-27
 Identities = 63/140 (45%), Positives = 74/140 (52%)
 Frame = +3

Query: 153 MVDYSKWKDIEISDDEDETHPNIDTPSLFRWRHXXXXXXXXXXXXXXXXXXXXXXXXXXX 332
           MVDYSKWK+IEISDDED+THPNIDTPSLFRWRH                           
Sbjct: 1   MVDYSKWKNIEISDDEDDTHPNIDTPSLFRWRHQARVERMAEMDHEKDELKKKRQSYQAR 60

Query: 333 LTETRKKISEADADSPNLNSLKKTXXXXXXXXXXXXXXXXXXXXXXXHTPWNVDTISEPG 512
           L + +++IS+ D D     +LKK                         TPWNVDTIS+PG
Sbjct: 61  LMDVKERISKKDGDE---EALKKELEKIEAEGKELDRIESEMIKKEKKTPWNVDTISKPG 117

Query: 513 FNKTVINTKALRPSNENLTE 572
           F KTVIN KA R  +ENL+E
Sbjct: 118 FEKTVINKKAGRKPDENLSE 137


>AY064174-1|AAL47186.1| 1984|Drosophila melanogaster rho GTPase
           guanine nucleotideexchange factor GEF64C protein.
          Length = 1984

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 12/33 (36%), Positives = 15/33 (45%)
 Frame = +2

Query: 251 PGPCGTHGRATPRERGTGAKKERKPTTSNRDQE 349
           PGP G  G   P      A   +K T +NRD +
Sbjct: 735 PGPAGVSGEEAPATAAATAAATQKTTAANRDYD 767


>AY061553-1|AAL29101.1|  595|Drosophila melanogaster LP08894p
           protein.
          Length = 595

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = +2

Query: 245 AAPGPCGTHGRATPRERGTGAKKERKPTTS 334
           +APGP  T G +TP+      KK +K TT+
Sbjct: 458 SAPGPVPTVGSSTPKPTTKKPKKPKKTTTT 487


>AE014297-1757|AAF54987.1|  595|Drosophila melanogaster CG9307-PA
           protein.
          Length = 595

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = +2

Query: 245 AAPGPCGTHGRATPRERGTGAKKERKPTTS 334
           +APGP  T G +TP+      KK +K TT+
Sbjct: 458 SAPGPVPTVGSSTPKPTTKKPKKPKKTTTT 487


>AE014296-900|AAF47940.2| 1984|Drosophila melanogaster CG32239-PA
           protein.
          Length = 1984

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 12/33 (36%), Positives = 15/33 (45%)
 Frame = +2

Query: 251 PGPCGTHGRATPRERGTGAKKERKPTTSNRDQE 349
           PGP G  G   P      A   +K T +NRD +
Sbjct: 735 PGPAGVSGEEAPATAAATAAATQKTTAANRDYD 767


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,869,376
Number of Sequences: 53049
Number of extensions: 399729
Number of successful extensions: 1109
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1079
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1106
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2255362491
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)