Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV13d16r
         (676 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    34   0.001
AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc fi...    29   0.031
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    25   0.87 
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    23   2.0  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    22   6.1  
AB083010-1|BAC54131.1|  132|Apis mellifera fatty acid binding pr...    22   6.1  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 34.3 bits (75), Expect = 0.001
 Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
 Frame = -3

Query: 440 LNGISNLRCMVAYNFSPTIQPSTICTLGYNDTTQSTCQGDSGGP-LTVIDEDGQITQVGV 264
           LN ++ + C   Y +   I  + +C        +  CQ DSGGP L       ++  +G+
Sbjct: 315 LNMLTQVEC---YKYYGNIMVNAMCAYAKG---KDACQMDSGGPVLWQNPRTKRLVNIGI 368

Query: 263 TSFVSSEGCHVDIPSGFIRPGHYLDWFKTVT 171
            S+ +  G +   P+G  + G Y+DW  + T
Sbjct: 369 ISWGAECGKY---PNGNTKVGSYIDWIVSQT 396


>AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc
           finger domain-Z1 isoform protein.
          Length = 111

 Score = 29.5 bits (63), Expect = 0.031
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = -1

Query: 160 SIGHRAHQKHPRQRKRLVQQKHPTRQRR 77
           SI HR H K+ +QRK + Q +   R++R
Sbjct: 53  SIYHRQHSKNEQQRKEMEQMREREREQR 80


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 24.6 bits (51), Expect = 0.87
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = -3

Query: 443 FLNGISNLRCMVAYNFSPTIQPSTICTLGYNDTTQ 339
           FLNG+ NL   + +++     PS IC    N+T Q
Sbjct: 96  FLNGLDNLHEYLKFSYPRMRAPSFICE---NETRQ 127


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = -3

Query: 305 TVIDEDGQITQVGVTSFVSSEGCHVDIPSGFIR 207
           T++ E    T  G + F++  GCH DI    I+
Sbjct: 344 TIMFEGHDTTASGSSFFLAVMGCHPDIQEKVIQ 376


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +3

Query: 327 LTSGLRSVVVAKRANGGGLNGRTEVVGH 410
           L +G  +VV+       G+ GRT  VG+
Sbjct: 131 LITGWSAVVITAAICTSGIVGRTHTVGY 158


>AB083010-1|BAC54131.1|  132|Apis mellifera fatty acid binding
           protein protein.
          Length = 132

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 9/14 (64%), Positives = 11/14 (78%), Gaps = 1/14 (7%)
 Frame = +1

Query: 433 PFKNTQFKFS-GDE 471
           PFKNT+ KF  G+E
Sbjct: 57  PFKNTEIKFKLGEE 70


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,121
Number of Sequences: 438
Number of extensions: 4407
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20464920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)