Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV13d13f
         (601 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ302654-1|CAC35519.1|  168|Anopheles gambiae gSG2-like protein ...    28   0.20 
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    26   1.1  
AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    24   4.3  
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          23   7.5  
AY645022-1|AAT92558.1|  165|Anopheles gambiae hairy protein.           23   7.5  
AY341195-1|AAR13759.1|  294|Anopheles gambiae laminin protein.         23   10.0 
AY341194-1|AAR13758.1|  294|Anopheles gambiae laminin protein.         23   10.0 
AY341193-1|AAR13757.1|  294|Anopheles gambiae laminin protein.         23   10.0 
AY341192-1|AAR13756.1|  294|Anopheles gambiae laminin protein.         23   10.0 
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    23   10.0 
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    23   10.0 
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    23   10.0 
AF283269-1|AAG15374.1|  114|Anopheles gambiae ribosomal protein ...    23   10.0 

>AJ302654-1|CAC35519.1|  168|Anopheles gambiae gSG2-like protein
           protein.
          Length = 168

 Score = 28.3 bits (60), Expect = 0.20
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = +3

Query: 201 GKGQQPSAERQKLQNELFAFRKTVQHGFP 287
           G GQQP  ++Q  Q + F F    Q GFP
Sbjct: 61  GNGQQPGQQQQGQQGQGFPFFGQGQSGFP 89


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 25.8 bits (54), Expect = 1.1
 Identities = 22/64 (34%), Positives = 29/64 (45%)
 Frame = +1

Query: 226  RGRSCRMNYLHSERQSSMASRTERQHSRGIRSSDSRRLVPPPERSRSTADQASNSTANTP 405
            R RS   +    +  S   SR+  Q SRG R S SR       RSRS +   S S   +P
Sbjct: 1131 RSRSRSQSAGSRKSGSRSRSRSGSQASRGSRRSRSRSRSRSGSRSRSRS--GSGSRQASP 1188

Query: 406  ITNR 417
            I+ +
Sbjct: 1189 ISRK 1192


>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 23.8 bits (49), Expect = 4.3
 Identities = 11/42 (26%), Positives = 17/42 (40%)
 Frame = +1

Query: 253 LHSERQSSMASRTERQHSRGIRSSDSRRLVPPPERSRSTADQ 378
           L  +RQ     R ++Q  +  +     R VPP  R +    Q
Sbjct: 269 LRQQRQQQQRPRQQQQQQQQQQQQQGERYVPPQLRQQRQQQQ 310


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 15/61 (24%), Positives = 26/61 (42%)
 Frame = +1

Query: 190 SLYAARASSPLLRGRSCRMNYLHSERQSSMASRTERQHSRGIRSSDSRRLVPPPERSRST 369
           S+  +R+     R R+ +       R S   SRT       +R+  +RR +PP   + + 
Sbjct: 427 SVSRSRSRGSRSRSRTSQSRSRSKTRTSRSRSRTPLPARGHVRARLTRRTIPPTRVAAAA 486

Query: 370 A 372
           A
Sbjct: 487 A 487


>AY645022-1|AAT92558.1|  165|Anopheles gambiae hairy protein.
          Length = 165

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +1

Query: 250 YLHSERQSSMASRTERQHSRGIRSSDS 330
           YLH  +QSS +S +    S    SS S
Sbjct: 102 YLHQHQQSSSSSSSSSSSSMSSSSSSS 128


>AY341195-1|AAR13759.1|  294|Anopheles gambiae laminin protein.
          Length = 294

 Score = 22.6 bits (46), Expect = 10.0
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -1

Query: 103 RRQNYTQTRKVTFSNQITNSWTRAHE 26
           ++ NYT      F NQ+  S  RA E
Sbjct: 236 QKANYTYQTLAGFKNQVEESSRRAEE 261


>AY341194-1|AAR13758.1|  294|Anopheles gambiae laminin protein.
          Length = 294

 Score = 22.6 bits (46), Expect = 10.0
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -1

Query: 103 RRQNYTQTRKVTFSNQITNSWTRAHE 26
           ++ NYT      F NQ+  S  RA E
Sbjct: 236 QKANYTYQTLAGFKNQVEESSRRAEE 261


>AY341193-1|AAR13757.1|  294|Anopheles gambiae laminin protein.
          Length = 294

 Score = 22.6 bits (46), Expect = 10.0
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -1

Query: 103 RRQNYTQTRKVTFSNQITNSWTRAHE 26
           ++ NYT      F NQ+  S  RA E
Sbjct: 236 QKANYTYQTLAGFKNQVEESSRRAEE 261


>AY341192-1|AAR13756.1|  294|Anopheles gambiae laminin protein.
          Length = 294

 Score = 22.6 bits (46), Expect = 10.0
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -1

Query: 103 RRQNYTQTRKVTFSNQITNSWTRAHE 26
           ++ NYT      F NQ+  S  RA E
Sbjct: 236 QKANYTYQTLAGFKNQVEESSRRAEE 261


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 22.6 bits (46), Expect = 10.0
 Identities = 20/80 (25%), Positives = 31/80 (38%)
 Frame = +1

Query: 163 VVSGQAEC*SLYAARASSPLLRGRSCRMNYLHSERQSSMASRTERQHSRGIRSSDSRRLV 342
           V+S Q    S   + +SS     +  +++       S+  S    QHS    SS S   +
Sbjct: 3   VISQQPTASSSTTSSSSSKPSPQQQQQLHSADVPHSSTSQSSRRPQHSSTSASSSSVPTL 62

Query: 343 PPPERSRSTADQASNSTANT 402
           P        A  +SNS  N+
Sbjct: 63  PTTSGEPRAAGSSSNSRRNS 82


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 22.6 bits (46), Expect = 10.0
 Identities = 20/80 (25%), Positives = 31/80 (38%)
 Frame = +1

Query: 163 VVSGQAEC*SLYAARASSPLLRGRSCRMNYLHSERQSSMASRTERQHSRGIRSSDSRRLV 342
           V+S Q    S   + +SS     +  +++       S+  S    QHS    SS S   +
Sbjct: 3   VISQQPTASSSTTSSSSSKPSPQQQQQLHSADVPHSSTSQSSRRPQHSSTSASSSSVPTL 62

Query: 343 PPPERSRSTADQASNSTANT 402
           P        A  +SNS  N+
Sbjct: 63  PTTSGEPRAAGSSSNSRRNS 82


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
            precursor protein.
          Length = 1623

 Score = 22.6 bits (46), Expect = 10.0
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -1

Query: 103  RRQNYTQTRKVTFSNQITNSWTRAHE 26
            ++ NYT      F NQ+  S  RA E
Sbjct: 1375 QKANYTYQTLAGFKNQVEESSRRAEE 1400


>AF283269-1|AAG15374.1|  114|Anopheles gambiae ribosomal protein S26
           protein.
          Length = 114

 Score = 22.6 bits (46), Expect = 10.0
 Identities = 10/22 (45%), Positives = 16/22 (72%), Gaps = 2/22 (9%)
 Frame = +1

Query: 301 HSRGIR--SSDSRRLVPPPERS 360
           HS+ +R  S ++RR+  PP+RS
Sbjct: 79  HSKVVRNRSKETRRIRTPPQRS 100


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 605,698
Number of Sequences: 2352
Number of extensions: 12714
Number of successful extensions: 44
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58029966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)