Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV13d13f
(601 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X86371-1|CAA60130.1| 1057|Homo sapiens hugl protein. 115 1e-25
D50550-1|BAA19516.1| 1032|Homo sapiens LLGL protein. 115 1e-25
BC028214-1|AAH28214.1| 467|Homo sapiens LLGL1 protein protein. 115 1e-25
BC028037-1|AAH28037.1| 467|Homo sapiens LLGL1 protein protein. 115 1e-25
X87342-1|CAA60780.1| 1015|Homo sapiens Human giant larvae homolo... 97 3e-20
BC064994-1|AAH64994.1| 1020|Homo sapiens lethal giant larvae hom... 97 3e-20
BC010879-1|AAH10879.1| 356|Homo sapiens lethal giant larvae hom... 97 3e-20
BC006503-1|AAH06503.1| 356|Homo sapiens LLGL2 protein protein. 97 3e-20
BC113408-1|AAI13409.1| 1115|Homo sapiens syntaxin binding protei... 84 4e-16
BC113382-1|AAI13383.1| 1115|Homo sapiens syntaxin binding protei... 84 4e-16
BC107737-1|AAI07738.1| 308|Homo sapiens STXBP5 protein protein. 84 4e-16
AL590709-5|CAI40741.1| 1115|Homo sapiens syntaxin binding protei... 84 4e-16
AL590709-4|CAI40740.1| 1151|Homo sapiens syntaxin binding protei... 84 4e-16
AL590709-3|CAI40739.1| 1098|Homo sapiens syntaxin binding protei... 84 4e-16
AL356415-3|CAI20240.1| 1115|Homo sapiens syntaxin binding protei... 84 4e-16
AL356415-2|CAI20241.1| 1151|Homo sapiens syntaxin binding protei... 84 4e-16
AL356415-1|CAI20239.1| 1098|Homo sapiens syntaxin binding protei... 84 4e-16
AL355365-6|CAI40425.1| 1115|Homo sapiens syntaxin binding protei... 84 4e-16
AL355365-5|CAI40424.1| 1151|Homo sapiens syntaxin binding protei... 84 4e-16
AL355365-4|CAI40423.1| 1098|Homo sapiens syntaxin binding protei... 84 4e-16
AB023223-1|BAA76850.1| 1221|Homo sapiens KIAA1006 protein protein. 81 3e-15
AL450998-13|CAH70861.1| 373|Homo sapiens SMART/HDAC1 associated... 33 0.58
AL450998-10|CAH70858.1| 3664|Homo sapiens SMART/HDAC1 associated... 33 0.58
AL034555-5|CAI19527.1| 373|Homo sapiens SMART/HDAC1 associated ... 33 0.58
AL034555-4|CAI19526.1| 3664|Homo sapiens SMART/HDAC1 associated ... 33 0.58
AF356524-1|AAK52750.1| 3664|Homo sapiens nuclear receptor transc... 33 0.58
U10991-1|AAA21253.1| 1692|Homo sapiens G2 protein. 31 3.1
CR457279-1|CAG33560.1| 330|Homo sapiens WDR5B protein. 31 3.1
BC043494-1|AAH43494.1| 330|Homo sapiens WD repeat domain 5B pro... 31 3.1
AK002149-1|BAA92110.1| 330|Homo sapiens protein ( Homo sapiens ... 31 3.1
>X86371-1|CAA60130.1| 1057|Homo sapiens hugl protein.
Length = 1057
Score = 115 bits (276), Expect = 1e-25
Identities = 57/107 (53%), Positives = 73/107 (68%), Gaps = 1/107 (0%)
Frame = +3
Query: 183 MLKF-IRGKGQQPSAERQKLQNELFAFRKTVQHGFPHRASALAWDPXXXXXXXXXXXXXX 359
M+KF R +G P +R+KL+ ELFAF KTV+HGFP++ SALA+DP
Sbjct: 1 MMKFPFRRQGADP--QREKLKQELFAFNKTVEHGFPNQPSALAFDPELRIMAIGTRSGAV 58
Query: 360 KVYGRPGVELYGQHTNYESIVTQIHFITGTGRLISLCDDNSLHLWEI 500
K+YG PGVE G H + + VTQ+HF+TG GRL+SL DD+SLHLWEI
Sbjct: 59 KIYGAPGVEFTGLHRD-AATVTQMHFLTGQGRLLSLLDDSSLHLWEI 104
>D50550-1|BAA19516.1| 1032|Homo sapiens LLGL protein.
Length = 1032
Score = 115 bits (276), Expect = 1e-25
Identities = 56/106 (52%), Positives = 72/106 (67%)
Frame = +3
Query: 183 MLKFIRGKGQQPSAERQKLQNELFAFRKTVQHGFPHRASALAWDPXXXXXXXXXXXXXXK 362
M+KF R + Q +R+KL+ ELFAF KTV+HGFP++ SALA+DP K
Sbjct: 1 MMKF-RFRRQGADPQREKLKQELFAFNKTVEHGFPNQPSALAFDPELRIMAIGTRSGAVK 59
Query: 363 VYGRPGVELYGQHTNYESIVTQIHFITGTGRLISLCDDNSLHLWEI 500
+YG PGVE G H + + VTQ+HF+TG GRL+SL DD+SLHLWEI
Sbjct: 60 IYGAPGVEFTGLHRD-AATVTQMHFLTGQGRLLSLLDDSSLHLWEI 104
>BC028214-1|AAH28214.1| 467|Homo sapiens LLGL1 protein protein.
Length = 467
Score = 115 bits (276), Expect = 1e-25
Identities = 56/106 (52%), Positives = 72/106 (67%)
Frame = +3
Query: 183 MLKFIRGKGQQPSAERQKLQNELFAFRKTVQHGFPHRASALAWDPXXXXXXXXXXXXXXK 362
M+KF R + Q +R+KL+ ELFAF KTV+HGFP++ SALA+DP K
Sbjct: 1 MMKF-RFRRQGADPQREKLKQELFAFNKTVEHGFPNQPSALAFDPELRIMAIGTRSGAVK 59
Query: 363 VYGRPGVELYGQHTNYESIVTQIHFITGTGRLISLCDDNSLHLWEI 500
+YG PGVE G H + + VTQ+HF+TG GRL+SL DD+SLHLWEI
Sbjct: 60 IYGAPGVEFTGLHRD-AATVTQMHFLTGQGRLLSLLDDSSLHLWEI 104
>BC028037-1|AAH28037.1| 467|Homo sapiens LLGL1 protein protein.
Length = 467
Score = 115 bits (276), Expect = 1e-25
Identities = 56/106 (52%), Positives = 72/106 (67%)
Frame = +3
Query: 183 MLKFIRGKGQQPSAERQKLQNELFAFRKTVQHGFPHRASALAWDPXXXXXXXXXXXXXXK 362
M+KF R + Q +R+KL+ ELFAF KTV+HGFP++ SALA+DP K
Sbjct: 1 MMKF-RFRRQGADPQREKLKQELFAFNKTVEHGFPNQPSALAFDPELRIMAIGTRSGAVK 59
Query: 363 VYGRPGVELYGQHTNYESIVTQIHFITGTGRLISLCDDNSLHLWEI 500
+YG PGVE G H + + VTQ+HF+TG GRL+SL DD+SLHLWEI
Sbjct: 60 IYGAPGVEFTGLHRD-AATVTQMHFLTGQGRLLSLLDDSSLHLWEI 104
>X87342-1|CAA60780.1| 1015|Homo sapiens Human giant larvae homologue
protein.
Length = 1015
Score = 97.5 bits (232), Expect = 3e-20
Identities = 49/109 (44%), Positives = 63/109 (57%)
Frame = +3
Query: 183 MLKFIRGKGQQPSAERQKLQNELFAFRKTVQHGFPHRASALAWDPXXXXXXXXXXXXXXK 362
M +F+R G P ER L+ +LF F KTV+HGFPH+ SAL + P K
Sbjct: 1 MRRFLR-PGHDPVRER--LKRDLFQFNKTVEHGFPHQPSALGYSPSLHILAIGTRSGAIK 57
Query: 363 VYGRPGVELYGQHTNYESIVTQIHFITGTGRLISLCDDNSLHLWEINEK 509
+YG PGVE G H + VTQIH + G +L++L DDNSLHLW + K
Sbjct: 58 LYGAPGVEFMGLHQE-NNAVTQIHLLPGQCQLVTLLDDNSLHLWSLKVK 105
>BC064994-1|AAH64994.1| 1020|Homo sapiens lethal giant larvae
homolog 2 (Drosophila) protein.
Length = 1020
Score = 97.5 bits (232), Expect = 3e-20
Identities = 49/109 (44%), Positives = 63/109 (57%)
Frame = +3
Query: 183 MLKFIRGKGQQPSAERQKLQNELFAFRKTVQHGFPHRASALAWDPXXXXXXXXXXXXXXK 362
M +F+R G P ER L+ +LF F KTV+HGFPH+ SAL + P K
Sbjct: 1 MRRFLR-PGHDPVRER--LKRDLFQFNKTVEHGFPHQPSALGYSPSLRILAIGTRSGAIK 57
Query: 363 VYGRPGVELYGQHTNYESIVTQIHFITGTGRLISLCDDNSLHLWEINEK 509
+YG PGVE G H + VTQIH + G +L++L DDNSLHLW + K
Sbjct: 58 LYGAPGVEFMGLHQE-NNAVTQIHLLPGQCQLVTLLDDNSLHLWSLKVK 105
>BC010879-1|AAH10879.1| 356|Homo sapiens lethal giant larvae
homolog 2 (Drosophila) protein.
Length = 356
Score = 97.5 bits (232), Expect = 3e-20
Identities = 49/109 (44%), Positives = 63/109 (57%)
Frame = +3
Query: 183 MLKFIRGKGQQPSAERQKLQNELFAFRKTVQHGFPHRASALAWDPXXXXXXXXXXXXXXK 362
M +F+R G P ER L+ +LF F KTV+HGFPH+ SAL + P K
Sbjct: 1 MRRFLR-PGHDPVRER--LKRDLFQFNKTVEHGFPHQPSALGYSPSLRILAIGTRSGAIK 57
Query: 363 VYGRPGVELYGQHTNYESIVTQIHFITGTGRLISLCDDNSLHLWEINEK 509
+YG PGVE G H + VTQIH + G +L++L DDNSLHLW + K
Sbjct: 58 LYGAPGVEFMGLHQE-NNAVTQIHLLPGQCQLVTLLDDNSLHLWSLKVK 105
>BC006503-1|AAH06503.1| 356|Homo sapiens LLGL2 protein protein.
Length = 356
Score = 97.5 bits (232), Expect = 3e-20
Identities = 49/109 (44%), Positives = 63/109 (57%)
Frame = +3
Query: 183 MLKFIRGKGQQPSAERQKLQNELFAFRKTVQHGFPHRASALAWDPXXXXXXXXXXXXXXK 362
M +F+R G P ER L+ +LF F KTV+HGFPH+ SAL + P K
Sbjct: 1 MRRFLR-PGHDPVRER--LKRDLFQFNKTVEHGFPHQPSALGYSPSLRILAIGTRSGAIK 57
Query: 363 VYGRPGVELYGQHTNYESIVTQIHFITGTGRLISLCDDNSLHLWEINEK 509
+YG PGVE G H + VTQIH + G +L++L DDNSLHLW + K
Sbjct: 58 LYGAPGVEFMGLHQE-NNAVTQIHLLPGQCQLVTLLDDNSLHLWSLKVK 105
>BC113408-1|AAI13409.1| 1115|Homo sapiens syntaxin binding protein 5
(tomosyn) protein.
Length = 1115
Score = 83.8 bits (198), Expect = 4e-16
Identities = 41/111 (36%), Positives = 63/111 (56%)
Frame = +3
Query: 207 GQQPSAERQKLQNELFAFRKTVQHGFPHRASALAWDPXXXXXXXXXXXXXXKVYGRPGVE 386
G + ++ LQ+E F KTV+HGFP++ SALA+DP +++GRPGVE
Sbjct: 31 GNREPEIQETLQSEHFQLCKTVRHGFPYQPSALAFDPVQKILAVGTQTGALRLFGRPGVE 90
Query: 387 LYGQHTNYESIVTQIHFITGTGRLISLCDDNSLHLWEINEKSLVELKSHVF 539
Y QH + +++ Q+ F+ G L+S D++LHLW + +K L S F
Sbjct: 91 CYCQHDSGAAVI-QLQFLINEGALVSALADDTLHLWNLRQKRPAILHSLKF 140
>BC113382-1|AAI13383.1| 1115|Homo sapiens syntaxin binding protein 5
(tomosyn) protein.
Length = 1115
Score = 83.8 bits (198), Expect = 4e-16
Identities = 41/111 (36%), Positives = 63/111 (56%)
Frame = +3
Query: 207 GQQPSAERQKLQNELFAFRKTVQHGFPHRASALAWDPXXXXXXXXXXXXXXKVYGRPGVE 386
G + ++ LQ+E F KTV+HGFP++ SALA+DP +++GRPGVE
Sbjct: 31 GNREPEIQETLQSEHFQLCKTVRHGFPYQPSALAFDPVQKILAVGTQTGALRLFGRPGVE 90
Query: 387 LYGQHTNYESIVTQIHFITGTGRLISLCDDNSLHLWEINEKSLVELKSHVF 539
Y QH + +++ Q+ F+ G L+S D++LHLW + +K L S F
Sbjct: 91 CYCQHDSGAAVI-QLQFLINEGALVSALADDTLHLWNLRQKRPAILHSLKF 140
>BC107737-1|AAI07738.1| 308|Homo sapiens STXBP5 protein protein.
Length = 308
Score = 83.8 bits (198), Expect = 4e-16
Identities = 41/111 (36%), Positives = 63/111 (56%)
Frame = +3
Query: 207 GQQPSAERQKLQNELFAFRKTVQHGFPHRASALAWDPXXXXXXXXXXXXXXKVYGRPGVE 386
G + ++ LQ+E F KTV+HGFP++ SALA+DP +++GRPGVE
Sbjct: 31 GNREPEIQETLQSEHFQLCKTVRHGFPYQPSALAFDPVQKILAVGTQTGALRLFGRPGVE 90
Query: 387 LYGQHTNYESIVTQIHFITGTGRLISLCDDNSLHLWEINEKSLVELKSHVF 539
Y QH + +++ Q+ F+ G L+S D++LHLW + +K L S F
Sbjct: 91 CYCQHDSGAAVI-QLQFLINEGALVSALADDTLHLWNLRQKRPAILHSLKF 140
>AL590709-5|CAI40741.1| 1115|Homo sapiens syntaxin binding protein 5
(tomosyn) protein.
Length = 1115
Score = 83.8 bits (198), Expect = 4e-16
Identities = 41/111 (36%), Positives = 63/111 (56%)
Frame = +3
Query: 207 GQQPSAERQKLQNELFAFRKTVQHGFPHRASALAWDPXXXXXXXXXXXXXXKVYGRPGVE 386
G + ++ LQ+E F KTV+HGFP++ SALA+DP +++GRPGVE
Sbjct: 31 GNREPEIQETLQSEHFQLCKTVRHGFPYQPSALAFDPVQKILAVGTQTGALRLFGRPGVE 90
Query: 387 LYGQHTNYESIVTQIHFITGTGRLISLCDDNSLHLWEINEKSLVELKSHVF 539
Y QH + +++ Q+ F+ G L+S D++LHLW + +K L S F
Sbjct: 91 CYCQHDSGAAVI-QLQFLINEGALVSALADDTLHLWNLRQKRPAILHSLKF 140
>AL590709-4|CAI40740.1| 1151|Homo sapiens syntaxin binding protein 5
(tomosyn) protein.
Length = 1151
Score = 83.8 bits (198), Expect = 4e-16
Identities = 41/111 (36%), Positives = 63/111 (56%)
Frame = +3
Query: 207 GQQPSAERQKLQNELFAFRKTVQHGFPHRASALAWDPXXXXXXXXXXXXXXKVYGRPGVE 386
G + ++ LQ+E F KTV+HGFP++ SALA+DP +++GRPGVE
Sbjct: 31 GNREPEIQETLQSEHFQLCKTVRHGFPYQPSALAFDPVQKILAVGTQTGALRLFGRPGVE 90
Query: 387 LYGQHTNYESIVTQIHFITGTGRLISLCDDNSLHLWEINEKSLVELKSHVF 539
Y QH + +++ Q+ F+ G L+S D++LHLW + +K L S F
Sbjct: 91 CYCQHDSGAAVI-QLQFLINEGALVSALADDTLHLWNLRQKRPAILHSLKF 140
>AL590709-3|CAI40739.1| 1098|Homo sapiens syntaxin binding protein 5
(tomosyn) protein.
Length = 1098
Score = 83.8 bits (198), Expect = 4e-16
Identities = 41/111 (36%), Positives = 63/111 (56%)
Frame = +3
Query: 207 GQQPSAERQKLQNELFAFRKTVQHGFPHRASALAWDPXXXXXXXXXXXXXXKVYGRPGVE 386
G + ++ LQ+E F KTV+HGFP++ SALA+DP +++GRPGVE
Sbjct: 31 GNREPEIQETLQSEHFQLCKTVRHGFPYQPSALAFDPVQKILAVGTQTGALRLFGRPGVE 90
Query: 387 LYGQHTNYESIVTQIHFITGTGRLISLCDDNSLHLWEINEKSLVELKSHVF 539
Y QH + +++ Q+ F+ G L+S D++LHLW + +K L S F
Sbjct: 91 CYCQHDSGAAVI-QLQFLINEGALVSALADDTLHLWNLRQKRPAILHSLKF 140
>AL356415-3|CAI20240.1| 1115|Homo sapiens syntaxin binding protein 5
(tomosyn) protein.
Length = 1115
Score = 83.8 bits (198), Expect = 4e-16
Identities = 41/111 (36%), Positives = 63/111 (56%)
Frame = +3
Query: 207 GQQPSAERQKLQNELFAFRKTVQHGFPHRASALAWDPXXXXXXXXXXXXXXKVYGRPGVE 386
G + ++ LQ+E F KTV+HGFP++ SALA+DP +++GRPGVE
Sbjct: 31 GNREPEIQETLQSEHFQLCKTVRHGFPYQPSALAFDPVQKILAVGTQTGALRLFGRPGVE 90
Query: 387 LYGQHTNYESIVTQIHFITGTGRLISLCDDNSLHLWEINEKSLVELKSHVF 539
Y QH + +++ Q+ F+ G L+S D++LHLW + +K L S F
Sbjct: 91 CYCQHDSGAAVI-QLQFLINEGALVSALADDTLHLWNLRQKRPAILHSLKF 140
>AL356415-2|CAI20241.1| 1151|Homo sapiens syntaxin binding protein 5
(tomosyn) protein.
Length = 1151
Score = 83.8 bits (198), Expect = 4e-16
Identities = 41/111 (36%), Positives = 63/111 (56%)
Frame = +3
Query: 207 GQQPSAERQKLQNELFAFRKTVQHGFPHRASALAWDPXXXXXXXXXXXXXXKVYGRPGVE 386
G + ++ LQ+E F KTV+HGFP++ SALA+DP +++GRPGVE
Sbjct: 31 GNREPEIQETLQSEHFQLCKTVRHGFPYQPSALAFDPVQKILAVGTQTGALRLFGRPGVE 90
Query: 387 LYGQHTNYESIVTQIHFITGTGRLISLCDDNSLHLWEINEKSLVELKSHVF 539
Y QH + +++ Q+ F+ G L+S D++LHLW + +K L S F
Sbjct: 91 CYCQHDSGAAVI-QLQFLINEGALVSALADDTLHLWNLRQKRPAILHSLKF 140
>AL356415-1|CAI20239.1| 1098|Homo sapiens syntaxin binding protein 5
(tomosyn) protein.
Length = 1098
Score = 83.8 bits (198), Expect = 4e-16
Identities = 41/111 (36%), Positives = 63/111 (56%)
Frame = +3
Query: 207 GQQPSAERQKLQNELFAFRKTVQHGFPHRASALAWDPXXXXXXXXXXXXXXKVYGRPGVE 386
G + ++ LQ+E F KTV+HGFP++ SALA+DP +++GRPGVE
Sbjct: 31 GNREPEIQETLQSEHFQLCKTVRHGFPYQPSALAFDPVQKILAVGTQTGALRLFGRPGVE 90
Query: 387 LYGQHTNYESIVTQIHFITGTGRLISLCDDNSLHLWEINEKSLVELKSHVF 539
Y QH + +++ Q+ F+ G L+S D++LHLW + +K L S F
Sbjct: 91 CYCQHDSGAAVI-QLQFLINEGALVSALADDTLHLWNLRQKRPAILHSLKF 140
>AL355365-6|CAI40425.1| 1115|Homo sapiens syntaxin binding protein 5
(tomosyn) protein.
Length = 1115
Score = 83.8 bits (198), Expect = 4e-16
Identities = 41/111 (36%), Positives = 63/111 (56%)
Frame = +3
Query: 207 GQQPSAERQKLQNELFAFRKTVQHGFPHRASALAWDPXXXXXXXXXXXXXXKVYGRPGVE 386
G + ++ LQ+E F KTV+HGFP++ SALA+DP +++GRPGVE
Sbjct: 31 GNREPEIQETLQSEHFQLCKTVRHGFPYQPSALAFDPVQKILAVGTQTGALRLFGRPGVE 90
Query: 387 LYGQHTNYESIVTQIHFITGTGRLISLCDDNSLHLWEINEKSLVELKSHVF 539
Y QH + +++ Q+ F+ G L+S D++LHLW + +K L S F
Sbjct: 91 CYCQHDSGAAVI-QLQFLINEGALVSALADDTLHLWNLRQKRPAILHSLKF 140
>AL355365-5|CAI40424.1| 1151|Homo sapiens syntaxin binding protein 5
(tomosyn) protein.
Length = 1151
Score = 83.8 bits (198), Expect = 4e-16
Identities = 41/111 (36%), Positives = 63/111 (56%)
Frame = +3
Query: 207 GQQPSAERQKLQNELFAFRKTVQHGFPHRASALAWDPXXXXXXXXXXXXXXKVYGRPGVE 386
G + ++ LQ+E F KTV+HGFP++ SALA+DP +++GRPGVE
Sbjct: 31 GNREPEIQETLQSEHFQLCKTVRHGFPYQPSALAFDPVQKILAVGTQTGALRLFGRPGVE 90
Query: 387 LYGQHTNYESIVTQIHFITGTGRLISLCDDNSLHLWEINEKSLVELKSHVF 539
Y QH + +++ Q+ F+ G L+S D++LHLW + +K L S F
Sbjct: 91 CYCQHDSGAAVI-QLQFLINEGALVSALADDTLHLWNLRQKRPAILHSLKF 140
>AL355365-4|CAI40423.1| 1098|Homo sapiens syntaxin binding protein 5
(tomosyn) protein.
Length = 1098
Score = 83.8 bits (198), Expect = 4e-16
Identities = 41/111 (36%), Positives = 63/111 (56%)
Frame = +3
Query: 207 GQQPSAERQKLQNELFAFRKTVQHGFPHRASALAWDPXXXXXXXXXXXXXXKVYGRPGVE 386
G + ++ LQ+E F KTV+HGFP++ SALA+DP +++GRPGVE
Sbjct: 31 GNREPEIQETLQSEHFQLCKTVRHGFPYQPSALAFDPVQKILAVGTQTGALRLFGRPGVE 90
Query: 387 LYGQHTNYESIVTQIHFITGTGRLISLCDDNSLHLWEINEKSLVELKSHVF 539
Y QH + +++ Q+ F+ G L+S D++LHLW + +K L S F
Sbjct: 91 CYCQHDSGAAVI-QLQFLINEGALVSALADDTLHLWNLRQKRPAILHSLKF 140
>AB023223-1|BAA76850.1| 1221|Homo sapiens KIAA1006 protein protein.
Length = 1221
Score = 81.0 bits (191), Expect = 3e-15
Identities = 39/104 (37%), Positives = 58/104 (55%)
Frame = +3
Query: 228 RQKLQNELFAFRKTVQHGFPHRASALAWDPXXXXXXXXXXXXXXKVYGRPGVELYGQHTN 407
++ L +E F KTV+HGFPH+ +ALA+DP ++ GRPGV+ Y QH +
Sbjct: 86 QETLTSEYFQICKTVRHGFPHQPTALAFDPVQKILAIGTRTGAIRILGRPGVDCYCQHES 145
Query: 408 YESIVTQIHFITGTGRLISLCDDNSLHLWEINEKSLVELKSHVF 539
+ V Q+ F+ G L+S D++LHLW + +K L S F
Sbjct: 146 -GAAVLQLQFLINEGALVSASSDDTLHLWNLRQKRPAILHSLKF 188
>AL450998-13|CAH70861.1| 373|Homo sapiens SMART/HDAC1 associated
repressor protein (SHARP) protein.
Length = 373
Score = 33.5 bits (73), Expect = 0.58
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Frame = +1
Query: 223 LRGRSCRMNYLHSERQSSMASRTERQHSRGIRSSDSRRLVPPP---ERSRSTADQASNST 393
+RGR NY HS +S +S++ Q + + S SR P RSRS++ + +S+
Sbjct: 187 VRGRRPERNYQHSRSRSPHSSQSRNQSPQRLASQASRPTRSPSGSGSRSRSSSSDSISSS 246
Query: 394 ANT 402
++T
Sbjct: 247 SST 249
>AL450998-10|CAH70858.1| 3664|Homo sapiens SMART/HDAC1 associated
repressor protein (SHARP) protein.
Length = 3664
Score = 33.5 bits (73), Expect = 0.58
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Frame = +1
Query: 223 LRGRSCRMNYLHSERQSSMASRTERQHSRGIRSSDSRRLVPPP---ERSRSTADQASNST 393
+RGR NY HS +S +S++ Q + + S SR P RSRS++ + +S+
Sbjct: 228 VRGRRPERNYQHSRSRSPHSSQSRNQSPQRLASQASRPTRSPSGSGSRSRSSSSDSISSS 287
Query: 394 ANT 402
++T
Sbjct: 288 SST 290
>AL034555-5|CAI19527.1| 373|Homo sapiens SMART/HDAC1 associated
repressor protein (SHARP) protein.
Length = 373
Score = 33.5 bits (73), Expect = 0.58
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Frame = +1
Query: 223 LRGRSCRMNYLHSERQSSMASRTERQHSRGIRSSDSRRLVPPP---ERSRSTADQASNST 393
+RGR NY HS +S +S++ Q + + S SR P RSRS++ + +S+
Sbjct: 187 VRGRRPERNYQHSRSRSPHSSQSRNQSPQRLASQASRPTRSPSGSGSRSRSSSSDSISSS 246
Query: 394 ANT 402
++T
Sbjct: 247 SST 249
>AL034555-4|CAI19526.1| 3664|Homo sapiens SMART/HDAC1 associated
repressor protein (SHARP) protein.
Length = 3664
Score = 33.5 bits (73), Expect = 0.58
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Frame = +1
Query: 223 LRGRSCRMNYLHSERQSSMASRTERQHSRGIRSSDSRRLVPPP---ERSRSTADQASNST 393
+RGR NY HS +S +S++ Q + + S SR P RSRS++ + +S+
Sbjct: 228 VRGRRPERNYQHSRSRSPHSSQSRNQSPQRLASQASRPTRSPSGSGSRSRSSSSDSISSS 287
Query: 394 ANT 402
++T
Sbjct: 288 SST 290
>AF356524-1|AAK52750.1| 3664|Homo sapiens nuclear receptor
transcription cofactor protein.
Length = 3664
Score = 33.5 bits (73), Expect = 0.58
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Frame = +1
Query: 223 LRGRSCRMNYLHSERQSSMASRTERQHSRGIRSSDSRRLVPPP---ERSRSTADQASNST 393
+RGR NY HS +S +S++ Q + + S SR P RSRS++ + +S+
Sbjct: 228 VRGRRPERNYQHSRSRSPHSSQSRNQSPQRLASQASRPTRSPSGSGSRSRSSSSDSISSS 287
Query: 394 ANT 402
++T
Sbjct: 288 SST 290
>U10991-1|AAA21253.1| 1692|Homo sapiens G2 protein.
Length = 1692
Score = 31.1 bits (67), Expect = 3.1
Identities = 17/55 (30%), Positives = 23/55 (41%)
Frame = +1
Query: 250 YLHSERQSSMASRTERQHSRGIRSSDSRRLVPPPERSRSTADQASNSTANTPITN 414
Y S S SR RQ+S+ S P P + S A N ++ P+TN
Sbjct: 1609 YPRSRYPQSSPSRLPRQYSQPANLHPSLEQAPAPSTAASQQSLAENDPSDAPLTN 1663
>CR457279-1|CAG33560.1| 330|Homo sapiens WDR5B protein.
Length = 330
Score = 31.1 bits (67), Expect = 3.1
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +3
Query: 387 LYGQHTNYESIVTQIHFITGTGRLISLCDDNSLHLWEINE-KSLVELKSH 533
LYG N E ++ + + + + RL+S DD +L LW++ K L LK H
Sbjct: 79 LYGH--NLE--ISDVAWSSDSSRLVSASDDKTLKLWDVRSGKCLKTLKGH 124
>BC043494-1|AAH43494.1| 330|Homo sapiens WD repeat domain 5B
protein.
Length = 330
Score = 31.1 bits (67), Expect = 3.1
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +3
Query: 387 LYGQHTNYESIVTQIHFITGTGRLISLCDDNSLHLWEINE-KSLVELKSH 533
LYG N E ++ + + + + RL+S DD +L LW++ K L LK H
Sbjct: 79 LYGH--NLE--ISDVAWSSDSSRLVSASDDKTLKLWDVRSGKCLKTLKGH 124
>AK002149-1|BAA92110.1| 330|Homo sapiens protein ( Homo sapiens
cDNA FLJ11287 fis, clone PLACE1009596, weakly similar to
VEGETATIBLE INCOMPATIBILITY PROTEIN HET-E-1. ).
Length = 330
Score = 31.1 bits (67), Expect = 3.1
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +3
Query: 387 LYGQHTNYESIVTQIHFITGTGRLISLCDDNSLHLWEINE-KSLVELKSH 533
LYG N E ++ + + + + RL+S DD +L LW++ K L LK H
Sbjct: 79 LYGH--NLE--ISDVAWSSDSSRLVSASDDKTLKLWDVRSGKCLKTLKGH 124
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,238,163
Number of Sequences: 237096
Number of extensions: 1547706
Number of successful extensions: 4245
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 3976
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4195
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6297951520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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