Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV13d08r
         (686 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069733-1|AAL39878.1|  541|Drosophila melanogaster LP05116p pro...   174   1e-43
AE014296-2793|AAF49418.2|  541|Drosophila melanogaster CG9701-PA...   174   1e-43
AY051709-1|AAK93133.1|  416|Drosophila melanogaster LD24756p pro...    31   2.0  
AE014298-1673|AAF48082.2|  416|Drosophila melanogaster CG1837-PA...    31   2.0  
AF310159-1|AAG41424.1| 3479|Drosophila melanogaster fry protein.       29   6.0  
AE014296-1700|AAF50228.2| 3479|Drosophila melanogaster CG32045-P...    29   6.0  

>AY069733-1|AAL39878.1|  541|Drosophila melanogaster LP05116p
           protein.
          Length = 541

 Score =  174 bits (423), Expect = 1e-43
 Identities = 87/208 (41%), Positives = 126/208 (60%), Gaps = 4/208 (1%)
 Frame = -3

Query: 684 RVAEKSAEHGY-PRTRLPQLSEEERVLIRGTADFFGVNHYTGYLVSATKH--IPEYSTVS 514
           R+   S E G+  R+RLP+ + EE   IRGT+DFFG+N YT  LV++  H    ++   S
Sbjct: 295 RIRNLSKEQGFGARSRLPEFTTEEIHRIRGTSDFFGINSYTSNLVTSNGHNNTGKFPVPS 354

Query: 513 LFSDINV-GNYRPPEWLQSAASWLTLMPNSIYDVLTHLKNKYNDPIFYVTENGWATSPEV 337
              D+ V  +    +W  S + WL + P  +Y++L  +  +YN P   VTENG   S   
Sbjct: 355 FNHDMGVVESQEGVDWPGSGSVWLKVYPKGMYNLLMWIHREYNAPEIIVTENG--VSDRG 412

Query: 336 GLEDDDRITYYRAALENILDSLDAGVRLKGYMAWSLMDNYEWMAGYTERFGLYEVDFSDP 157
           GLED  R+ YY   L  +LD+++ G  + GY+AWSLMD+YEW AG++E+FGLY VDF+ P
Sbjct: 413 GLEDYARVDYYNLYLSAVLDAMEDGANISGYIAWSLMDSYEWKAGFSEKFGLYHVDFNSP 472

Query: 156 ARPRTPRKSAFVYKEILRSRVIDHDYEP 73
            R RTP+ SA V+ ++ ++  ID  Y P
Sbjct: 473 QRTRTPKISARVFAQLCKTNTIDWSYRP 500


>AE014296-2793|AAF49418.2|  541|Drosophila melanogaster CG9701-PA
           protein.
          Length = 541

 Score =  174 bits (423), Expect = 1e-43
 Identities = 87/208 (41%), Positives = 126/208 (60%), Gaps = 4/208 (1%)
 Frame = -3

Query: 684 RVAEKSAEHGY-PRTRLPQLSEEERVLIRGTADFFGVNHYTGYLVSATKH--IPEYSTVS 514
           R+   S E G+  R+RLP+ + EE   IRGT+DFFG+N YT  LV++  H    ++   S
Sbjct: 295 RIRNLSKEQGFGARSRLPEFTTEEIHRIRGTSDFFGINSYTSNLVTSNGHNNTGKFPVPS 354

Query: 513 LFSDINV-GNYRPPEWLQSAASWLTLMPNSIYDVLTHLKNKYNDPIFYVTENGWATSPEV 337
              D+ V  +    +W  S + WL + P  +Y++L  +  +YN P   VTENG   S   
Sbjct: 355 FNHDMGVVESQEGVDWPGSGSVWLKVYPKGMYNLLMWIHREYNAPEIIVTENG--VSDRG 412

Query: 336 GLEDDDRITYYRAALENILDSLDAGVRLKGYMAWSLMDNYEWMAGYTERFGLYEVDFSDP 157
           GLED  R+ YY   L  +LD+++ G  + GY+AWSLMD+YEW AG++E+FGLY VDF+ P
Sbjct: 413 GLEDYARVDYYNLYLSAVLDAMEDGANISGYIAWSLMDSYEWKAGFSEKFGLYHVDFNSP 472

Query: 156 ARPRTPRKSAFVYKEILRSRVIDHDYEP 73
            R RTP+ SA V+ ++ ++  ID  Y P
Sbjct: 473 QRTRTPKISARVFAQLCKTNTIDWSYRP 500


>AY051709-1|AAK93133.1|  416|Drosophila melanogaster LD24756p
           protein.
          Length = 416

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = -3

Query: 657 GYPRTRLPQLSEEERVLIRGTADFFGVNHYTGYLVSA 547
           GYP  RL +L EEE V  +GT D   +  +    +SA
Sbjct: 110 GYPTLRLFKLGEEESVKFKGTRDLPAITDFINKELSA 146


>AE014298-1673|AAF48082.2|  416|Drosophila melanogaster CG1837-PA
           protein.
          Length = 416

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = -3

Query: 657 GYPRTRLPQLSEEERVLIRGTADFFGVNHYTGYLVSA 547
           GYP  RL +L EEE V  +GT D   +  +    +SA
Sbjct: 110 GYPTLRLFKLGEEESVKFKGTRDLPAITDFINKELSA 146


>AF310159-1|AAG41424.1| 3479|Drosophila melanogaster fry protein.
          Length = 3479

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 9/57 (15%)
 Frame = -3

Query: 636  PQLSEEERVLIRGTADFFGVNH--------YTGYLVSATKHIPEYS-TVSLFSDINV 493
            P+L +EE V +RGT+D     H        Y GY    T+ +P+ S  +S F   NV
Sbjct: 1938 PELRQEENVELRGTSDAAPNGHPHPLPMPEYGGYFAPLTEFLPDVSLPISGFHRCNV 1994


>AE014296-1700|AAF50228.2| 3479|Drosophila melanogaster CG32045-PB,
            isoform B protein.
          Length = 3479

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 9/57 (15%)
 Frame = -3

Query: 636  PQLSEEERVLIRGTADFFGVNH--------YTGYLVSATKHIPEYS-TVSLFSDINV 493
            P+L +EE V +RGT+D     H        Y GY    T+ +P+ S  +S F   NV
Sbjct: 1938 PELRQEENVELRGTSDAAPNGHPHPLPMPEYGGYFAPLTEFLPDVSLPISGFHRCNV 1994


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,531,286
Number of Sequences: 53049
Number of extensions: 721348
Number of successful extensions: 1867
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1811
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1863
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 3013199100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)