Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV13d08r
         (686 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF099915-3|AAC68766.1|  475|Caenorhabditis elegans Hypothetical ...   129   2e-30
U41557-9|AAA83309.1|  479|Caenorhabditis elegans Hypothetical pr...   110   1e-24
U58758-12|AAB93432.1|  392|Caenorhabditis elegans Hypothetical p...    32   0.44 
Z83106-5|CAB05492.1|  392|Caenorhabditis elegans Hypothetical pr...    29   3.1  
AF077537-1|AAC26273.2|  111|Caenorhabditis elegans Hypothetical ...    29   4.1  
Z73427-5|CAA97803.1|  917|Caenorhabditis elegans Hypothetical pr...    28   5.4  

>AF099915-3|AAC68766.1|  475|Caenorhabditis elegans Hypothetical
           protein E02H9.5 protein.
          Length = 475

 Score =  129 bits (311), Expect = 2e-30
 Identities = 69/185 (37%), Positives = 104/185 (56%), Gaps = 6/185 (3%)
 Frame = -3

Query: 639 LPQLSEEERVLIRGTADFFGVNHYTGYLVSATKHIPEYSTVSLFSDINVGNYRPPEWLQS 460
           +P+ SEEE+ +I+G+ DF G+N+Y  +LV A K   + S+ S      V  +   +W + 
Sbjct: 286 IPKFSEEEKEIIKGSTDFIGINYYLSFLVRAPKDGEKASSQSQHDGGYV--FVEGKWDKI 343

Query: 459 AA-SWLTLMPNSIYDVLTHLKNKY-NDPIFYVTENGW----ATSPEVGLEDDDRITYYRA 298
              +W+   P+ +  +L ++K KY N P+F +TENG         E    D  RI Y   
Sbjct: 344 CGETWIRYAPDGLLKILRYVKEKYANTPVF-ITENGCMDIVGQDQEDAFHDQHRIDYISG 402

Query: 297 ALENILDSLDAGVRLKGYMAWSLMDNYEWMAGYTERFGLYEVDFSDPARPRTPRKSAFVY 118
            LE +  +LD G  + GY  W+LMDN+EW  G+  +FGL EVDF  P + RT +KSA+ Y
Sbjct: 403 HLEAVAKALDEGCNVIGYTVWTLMDNFEWDDGFELKFGLCEVDFESPDKTRTMKKSAYFY 462

Query: 117 KEILR 103
           KE ++
Sbjct: 463 KEFIK 467


>U41557-9|AAA83309.1|  479|Caenorhabditis elegans Hypothetical
           protein C50F7.10 protein.
          Length = 479

 Score =  110 bits (264), Expect = 1e-24
 Identities = 60/186 (32%), Positives = 99/186 (53%), Gaps = 7/186 (3%)
 Frame = -3

Query: 639 LPQLSEEERVLIRGTADFFGVNHYTGYLVSATKHIPEYSTVSLFSDINVGNYRPPEWLQS 460
           LP+ SEEE+ LI+G+ DF G+N+Y  ++V       E ++ S        N    E +  
Sbjct: 286 LPKFSEEEKKLIKGSTDFLGINYYLSHIVRNLNDGEEPASQSERDAAYAFNEGKWEKI-C 344

Query: 459 AASWLTLMPNSIYDVLTHLKNKYNDPIFYVTENGW-------ATSPEVGLEDDDRITYYR 301
             +W+   P+ ++ +L ++++KYN+   ++TENG            E  L+D  RI +  
Sbjct: 345 GETWVRYAPDGLFGLLKYVRDKYNNIPVFITENGCMDLVGGEGRKEEEILDDKHRIKFIS 404

Query: 300 AALENILDSLDAGVRLKGYMAWSLMDNYEWMAGYTERFGLYEVDFSDPARPRTPRKSAFV 121
             LE +  +L+ G  + GY  W+LMDN+EW  G+  +FG+  VDF  P + RT + SA  
Sbjct: 405 GHLEAVAKALEEGCNVIGYTLWTLMDNFEWDDGFGVKFGICRVDFDSPDKTRTMKYSAKY 464

Query: 120 YKEILR 103
           Y+  +R
Sbjct: 465 YQTFIR 470


>U58758-12|AAB93432.1|  392|Caenorhabditis elegans Hypothetical
           protein ZK1127.10 protein.
          Length = 392

 Score = 31.9 bits (69), Expect = 0.44
 Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
 Frame = +1

Query: 562 PSIVVHSKEVSGSSDQHSFFL-GELRESGAWVAVLCAF 672
           P   VH K+  G S   SF+L GEL+ES A+++ L  F
Sbjct: 289 PQHEVHEKQTKGMSGMISFYLKGELQESRAFLSALKVF 326


>Z83106-5|CAB05492.1|  392|Caenorhabditis elegans Hypothetical
           protein F22B8.6 protein.
          Length = 392

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
 Frame = +1

Query: 562 PSIVVHSKEVSGSSDQHSFFL-GELRESGAWVAVLCAF 672
           P   VH K+  G S   SF+L GEL +S A+++ L  F
Sbjct: 289 PQHTVHVKQTKGMSGMISFYLKGELCQSRAFLSALKVF 326


>AF077537-1|AAC26273.2|  111|Caenorhabditis elegans Hypothetical
           protein F16G10.5 protein.
          Length = 111

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = -2

Query: 196 RTFRFVRG*LFGSRPPSHPAQVRVRLQGDLEEQGHRPRLRAR 71
           R  R+VRG      PP  P + R RLQ  ++ +    R+R+R
Sbjct: 30  REGRWVRGAREDREPPPPPRRPRTRLQVRVDREAAEARMRSR 71


>Z73427-5|CAA97803.1|  917|Caenorhabditis elegans Hypothetical
           protein F58B3.5 protein.
          Length = 917

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 16/56 (28%), Positives = 26/56 (46%)
 Frame = -3

Query: 486 YRPPEWLQSAASWLTLMPNSIYDVLTHLKNKYNDPIFYVTENGWATSPEVGLEDDD 319
           Y  PE   +A SW   +     ++L +L N  N  + +V  +     PE+ L +DD
Sbjct: 397 YMRPESQDTAFSWDDFVLKVNSELLNNLGNFINRALSFVANSFGGVVPEMNLTNDD 452


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,294,241
Number of Sequences: 27780
Number of extensions: 356942
Number of successful extensions: 920
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 894
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 916
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)