Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV13d08f
         (596 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            23   3.0  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   4.0  
DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated...    21   6.9  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   6.9  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   6.9  
DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.              21   9.2  

>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 9/41 (21%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
 Frame = -1

Query: 506 FKPIGYQWI---GKTSQFLQLLRQVPVIQRNHWSNIVFQHL 393
           ++PI Y+WI   G   QF+ ++ +        + +++  H+
Sbjct: 80  YQPISYKWITRSGTREQFIDMVARCNKAGVRIYVDVIMNHM 120


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 15/53 (28%), Positives = 20/53 (37%)
 Frame = +1

Query: 97  FCLGQPQPHTRSKELGMKMEKGKISGXXXXXXXQQLSPMKAMVTSLPTLTTTW 255
           FCL    PH     L  + +    S         Q+ PM A V +   LT T+
Sbjct: 429 FCLDGKLPHDDQPPLSPQSDSSSSSRSAESPMSVQVDPMAASVVA-AALTGTY 480


>DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 391

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +3

Query: 156 KGENIWDYMTHNNPTV 203
           KG++IWDY +   P V
Sbjct: 314 KGQSIWDYDSTYIPKV 329


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -3

Query: 546 LCHPIWRKPRVRSLQTNRLSV 484
           +C+ +WR  R+   QTN +S+
Sbjct: 54  VCNGLWRWIRLTYGQTNHISL 74


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -3

Query: 546 LCHPIWRKPRVRSLQTNRLSV 484
           +C+ +WR  R+   QTN +S+
Sbjct: 92  VCNGLWRWIRLTYGQTNHISL 112


>DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.
          Length = 135

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +3

Query: 12 MKTFLLLGLLGVYCSALSIK 71
          MKT L++  + +   ALSIK
Sbjct: 1  MKTILIISAICICVGALSIK 20


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,480
Number of Sequences: 438
Number of extensions: 3429
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17482179
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)