Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV13d07r
(681 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like p... 58 6e-09
U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like p... 54 9e-08
AF003384-12|AAB54236.2| 331|Caenorhabditis elegans Trypsin-like... 38 0.005
U39848-2|AAT81211.1| 279|Caenorhabditis elegans Hypothetical pr... 35 0.062
AC024812-7|AAF59548.2| 419|Caenorhabditis elegans Hypothetical ... 30 1.8
Z50004-1|CAA90291.1| 396|Caenorhabditis elegans Hypothetical pr... 29 2.3
U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like pr... 29 2.3
U41992-5|AAA83356.1| 549|Caenorhabditis elegans Hypothetical pr... 29 4.1
U39745-4|AAA80446.1| 325|Caenorhabditis elegans Collagen protei... 29 4.1
Z81486-10|CAB03993.3| 681|Caenorhabditis elegans Hypothetical p... 28 7.1
Z81091-2|CAB03143.2| 2972|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z78013-9|CAB01420.2| 297|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z70287-4|CAA94297.1| 299|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical pr... 27 9.4
U41548-2|AAA83204.1| 399|Caenorhabditis elegans Hypothetical pr... 27 9.4
U41039-6|AAK68626.1| 135|Caenorhabditis elegans Synapse defecti... 27 9.4
U41039-5|AAL11488.1| 357|Caenorhabditis elegans Synapse defecti... 27 9.4
U41039-4|AAL11489.1| 452|Caenorhabditis elegans Synapse defecti... 27 9.4
U41039-3|AAK68627.2| 537|Caenorhabditis elegans Synapse defecti... 27 9.4
>U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like
protease protein 1 protein.
Length = 293
Score = 58.0 bits (134), Expect = 6e-09
Identities = 60/197 (30%), Positives = 82/197 (41%), Gaps = 6/197 (3%)
Frame = -2
Query: 653 CGGSVLTARSVLTAAHCIXAVFTLGSLSGNLRLTVGTNQWNSGGSLHTVSRNITHPHY-V 477
CGGS++ VLTAAHC F + + VG ++ + GS H V+ HP Y +
Sbjct: 84 CGGSLIDPNFVLTAAHC----FAKDRRPTSYSVRVGGHR-SGSGSPHRVTAVSIHPWYNI 138
Query: 476 SNTIKNDLGILITSSNIVFNNRVRPISL-SFDYVPGGVPVRVAGWGRVRANGALST-NLL 303
D I+ + + RPI L S V + V V GWG +LS L
Sbjct: 139 GFPSSYDFAIMRIHPPVNTSTTARPICLPSLPAVENRLCV-VTGWGSTIEGSSLSAPTLR 197
Query: 302 EINVRTIDGQTCVRTAAQAAIDLNVRAPPVEPHIELCTFHAEG-TGTCNGDSGSAL--AR 132
EI+V + C + P + LC ++ G +C GDSG L AR
Sbjct: 198 EIHVPLLSTLFCSSLPNYIG---RIHLPSM-----LCAGYSYGKIDSCQGDSGGPLMCAR 249
Query: 131 TDSGLQVGIVSWGFPCA 81
G+VSWG CA
Sbjct: 250 DGHWELTGVVSWGIGCA 266
>U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like
protease protein 2 protein.
Length = 265
Score = 54.0 bits (124), Expect = 9e-08
Identities = 61/202 (30%), Positives = 87/202 (43%), Gaps = 11/202 (5%)
Frame = -2
Query: 653 CGGSVLTARSVLTAAHCIXAVFTLGSLSGNLRLTVG---TNQWNSGGSLHTVSRNITHPH 483
CG S+L ++TAAHC F + + VG NQ + + + R +P
Sbjct: 54 CGASILDKTHLITAAHC----FEEDERVSSYEVVVGDWDNNQTDGNEQIFYLQRIHFYPL 109
Query: 482 YVSNTIKNDLGIL-ITSSNIVFNNRVRPISL---SFDYVPGGVPVRVAGWGRVRANGALS 315
Y + +D+ IL I I FN +PI L F Y PG V V+GWG + A
Sbjct: 110 Y-KDIFSHDIAILEIPYPGIEFNEYAQPICLPSKDFVYTPGRQCV-VSGWGSMGLRYA-- 165
Query: 314 TNLLEINVRTIDGQTCVRTAAQAAIDLNVRAPPVEPHIELCTFHAE-GTGTCNGDSGSAL 138
L + I+ CV ++Q ++ A C + E G +C GDSG
Sbjct: 166 ERLQAALIPIINRFDCV-NSSQIYSSMSRSA--------FCAGYLEGGIDSCQGDSGGPF 216
Query: 137 A-RTDSGLQV--GIVSWGFPCA 81
A R + G V G++SWG CA
Sbjct: 217 ACRREDGAFVLAGVISWGDGCA 238
>AF003384-12|AAB54236.2| 331|Caenorhabditis elegans Trypsin-like
protease protein 5 protein.
Length = 331
Score = 38.3 bits (85), Expect = 0.005
Identities = 23/60 (38%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
Frame = -2
Query: 662 ELVCGGSVLTARSVLTAAHCIXAVFTLGSLSGNLRLTVG--TNQW---NSGGSLHTVSRN 498
E++CGG+++T + VLTAAHC F G G W NS GSL RN
Sbjct: 59 EVICGGTLITLKHVLTAAHCFQKHFGAKKEGGEENSMSGRYCESWVIYNSEGSLEIYFRN 118
Score = 34.3 bits (75), Expect = 0.082
Identities = 44/178 (24%), Positives = 63/178 (35%), Gaps = 8/178 (4%)
Frame = -2
Query: 593 VFTLGSLSGNLRLTVGTNQWNSGGSLHTVSRNITHPHYVSNTIK-NDLGILITSSNIVFN 417
V T+G++ L G G +SR Y ++ + ND+ IL S I
Sbjct: 131 VVTVGAMCTRLEQKYGCVNEKQNGKTLKISRFAIGDFYKTHCEQGNDIVILELESTIDDV 190
Query: 416 NRVRPISLSF---DYVPGGVPVRVAGWGRVRANGALSTNLLEINVRTIDGQTCVRTAAQA 246
L F + G V GWG G + I V T+ +T
Sbjct: 191 EGANYACLPFLPEVNIQSGANVTSFGWGSDPGKGFDNAAFPMIQVLTLATETLATCEENW 250
Query: 245 AIDLNVRAPPVEPHIELCTFHAEGTGTCNGDSGSALA--RTDSGLQ--VGIVSWGFPC 84
+ P CT E C+GDSG L ++DS + + IVS+G C
Sbjct: 251 GTSI--------PFDSFCTAEEEDKNVCSGDSGGGLTFHQSDSAREFIIAIVSYGSDC 300
>U39848-2|AAT81211.1| 279|Caenorhabditis elegans Hypothetical
protein B0286.6 protein.
Length = 279
Score = 34.7 bits (76), Expect = 0.062
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Frame = -2
Query: 194 CTFHAEGTGTCNGDSGSALARTDS----GLQVGIVSWGFPCASGSS*HVRQSQR 45
CT +C+GDSGS + RT + VG++S G PC H RQ Q+
Sbjct: 197 CTSAVNRGLSCDGDSGSGVVRTSDTRNVQVLVGVLSAGMPCPELYDTHNRQRQQ 250
>AC024812-7|AAF59548.2| 419|Caenorhabditis elegans Hypothetical
protein Y54E10BR.8 protein.
Length = 419
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 3/47 (6%)
Frame = +2
Query: 152 CHHCKYQFLLRGMCRARYEVRQEEPSR*GQWPPGPQ---SSRKSDHQ 283
CH+C QF RG + + E QW G Q SS KS H+
Sbjct: 279 CHYCTRQFSQRGALKTHMRLHTGERPFVCQWECGKQFASSSAKSHHE 325
>Z50004-1|CAA90291.1| 396|Caenorhabditis elegans Hypothetical
protein C02B4.2 protein.
Length = 396
Score = 29.5 bits (63), Expect = 2.3
Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +2
Query: 116 GDRCRSEPMRCHCHHCKY-QFLLRGMCRARYEVRQ 217
GD + MRC C HC+Y + ++ GM R + +
Sbjct: 71 GDCIIDKSMRCSCRHCRYKKCIIAGMDRGELSMER 105
>U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like
protease protein 3 protein.
Length = 313
Score = 29.5 bits (63), Expect = 2.3
Identities = 52/207 (25%), Positives = 82/207 (39%), Gaps = 16/207 (7%)
Frame = -2
Query: 665 QELVCGGSVLTARSVLTAAHCIXAVFTLGSLSGNLRLTVGTNQWNSGGSLHTVSRNITHP 486
Q ++CG +V+ ++TAAHC + T N+ +V H
Sbjct: 62 QGILCGATVIDDFWLVTAAHCALQLQTRS-------FVYVREPKNNRERSFSVKEAYIHS 114
Query: 485 HYVSNTIKNDLGILITSSNIVFNNRVRPISLSFD------YVPGGVPVRVAGWGRVRANG 324
Y + T ND+ +L SS++ ++P+ L D GV V G+G
Sbjct: 115 GYNNQTADNDIALLRISSDL-SKLGIKPVCLVHDDSKLLKQYKNGV---VIGYGLTLGED 170
Query: 323 AL-------STNLLEINVRTIDGQTCVRTAAQAAIDLNVRAPPVEPHIELCTFHAEGTGT 165
+ S L +V I CV+T ++ L+V+ ++C A GT
Sbjct: 171 SSGEPKLINSQTLQSTSVPIISDDDCVKTWRFLSL-LSVKI----TGYQICA-GAYLHGT 224
Query: 164 CNGDSGSALARTDSG---LQVGIVSWG 93
GDSG L S +Q+GI S+G
Sbjct: 225 APGDSGGPLLIHKSNGEYVQIGITSYG 251
>U41992-5|AAA83356.1| 549|Caenorhabditis elegans Hypothetical
protein F32E10.5 protein.
Length = 549
Score = 28.7 bits (61), Expect = 4.1
Identities = 20/70 (28%), Positives = 32/70 (45%)
Frame = +2
Query: 104 RCRLGDRCRSEPMRCHCHHCKYQFLLRGMCRARYEVRQEEPSR*GQWPPGPQSSRKSDHQ 283
RC++ C +EP + H KY+F+ MC R+ +PS+ G W P + +
Sbjct: 219 RCQI-TTC-TEPFQIVLCHPKYEFM--NMCSFLLAPRRGQPSQEGVWIPREIAKQLEREN 274
Query: 284 WFSH*SPEDS 313
F +DS
Sbjct: 275 GFERNDYDDS 284
>U39745-4|AAA80446.1| 325|Caenorhabditis elegans Collagen protein
173 protein.
Length = 325
Score = 28.7 bits (61), Expect = 4.1
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = +2
Query: 32 PGPEGADSDEHVRSSPMRKGSPTTRCRLGDRCRSEPMRCHCHHC 163
PGP G + +E V P + G P G R + P C+HC
Sbjct: 277 PGPTGQEGEEGVIGEPGKPGEPGKSGAAGARGPAGP----CNHC 316
>Z81486-10|CAB03993.3| 681|Caenorhabditis elegans Hypothetical
protein C53A5.13 protein.
Length = 681
Score = 27.9 bits (59), Expect = 7.1
Identities = 12/42 (28%), Positives = 25/42 (59%)
Frame = -2
Query: 215 VEPHIELCTFHAEGTGTCNGDSGSALARTDSGLQVGIVSWGF 90
+EPH++ C F+ +GT C+ +++ + + + +VS GF
Sbjct: 571 IEPHLKTCGFNEQGTFKCD----MSISEVFTQIPIVLVSAGF 608
>Z81091-2|CAB03143.2| 2972|Caenorhabditis elegans Hypothetical protein
F55H12.3 protein.
Length = 2972
Score = 27.5 bits (58), Expect = 9.4
Identities = 17/67 (25%), Positives = 30/67 (44%)
Frame = -2
Query: 326 GALSTNLLEINVRTIDGQTCVRTAAQAAIDLNVRAPPVEPHIELCTFHAEGTGTCNGDSG 147
G +T+ ++ + D C+ A I+ NV P P+ E+C +GT +S
Sbjct: 2677 GLTTTSQASTSINSCDTINCID--ANTMINKNVTVGPSTPYSEICIACEQGTFQNVSNSD 2734
Query: 146 SALARTD 126
S + +D
Sbjct: 2735 SCIPCSD 2741
>Z78013-9|CAB01420.2| 297|Caenorhabditis elegans Hypothetical
protein F15B9.5 protein.
Length = 297
Score = 27.5 bits (58), Expect = 9.4
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = -2
Query: 656 VCGGSVLTARSVLTAAHCI 600
VCGG ++ V+T+AHC+
Sbjct: 45 VCGGVLIAPSIVITSAHCV 63
>Z70287-4|CAA94297.1| 299|Caenorhabditis elegans Hypothetical
protein R09E10.6 protein.
Length = 299
Score = 27.5 bits (58), Expect = 9.4
Identities = 20/74 (27%), Positives = 36/74 (48%)
Frame = -2
Query: 332 ANGALSTNLLEINVRTIDGQTCVRTAAQAAIDLNVRAPPVEPHIELCTFHAEGTGTCNGD 153
+N L T +LE V + D T + + + I +N +E H+E+CT +E +
Sbjct: 186 SNSGLIT-VLERGVSSED--TLIPSVRRGVIPVNTLRYQIEKHLEMCTPASEQLSKSSDP 242
Query: 152 SGSALARTDSGLQV 111
+ S++ G+QV
Sbjct: 243 NISSMYVFHQGIQV 256
>Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical
protein C09G5.6 protein.
Length = 948
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/37 (37%), Positives = 16/37 (43%)
Frame = +2
Query: 29 QPGPEGADSDEHVRSSPMRKGSPTTRCRLGDRCRSEP 139
QPG GA + SP G P R G C+S P
Sbjct: 457 QPGAPGAPGYHGMNGSPGTPGKPGLPGRNGQSCKSIP 493
>U41548-2|AAA83204.1| 399|Caenorhabditis elegans Hypothetical
protein M02F4.1 protein.
Length = 399
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +3
Query: 534 PLVCADCQTKISRETSKCEYSXNAMSSGEHRACGEH*AS 650
PL C DC I S +++ + + S RAC ++ A+
Sbjct: 283 PLTCPDCPDGIETLGSDLDFAFSTIYSWTRRACSQNEAT 321
>U41039-6|AAK68626.1| 135|Caenorhabditis elegans Synapse defective
protein 9, isoformb protein.
Length = 135
Score = 27.5 bits (58), Expect = 9.4
Identities = 18/48 (37%), Positives = 20/48 (41%), Gaps = 3/48 (6%)
Frame = +2
Query: 29 QPGPEGADS-DEHVRSSPMRKGSPTT--RCRLGDRCRSEPMRCHCHHC 163
Q G DS D SP R+ SP + GD C S P HC C
Sbjct: 28 QRGDGTPDSTDTQKGCSPQRELSPESDPSTSSGDSCPSPPKMLHCKEC 75
>U41039-5|AAL11488.1| 357|Caenorhabditis elegans Synapse defective
protein 9, isoforma protein.
Length = 357
Score = 27.5 bits (58), Expect = 9.4
Identities = 18/48 (37%), Positives = 20/48 (41%), Gaps = 3/48 (6%)
Frame = +2
Query: 29 QPGPEGADS-DEHVRSSPMRKGSPTT--RCRLGDRCRSEPMRCHCHHC 163
Q G DS D SP R+ SP + GD C S P HC C
Sbjct: 250 QRGDGTPDSTDTQKGCSPQRELSPESDPSTSSGDSCPSPPKMLHCKEC 297
>U41039-4|AAL11489.1| 452|Caenorhabditis elegans Synapse defective
protein 9, isoformd protein.
Length = 452
Score = 27.5 bits (58), Expect = 9.4
Identities = 18/48 (37%), Positives = 20/48 (41%), Gaps = 3/48 (6%)
Frame = +2
Query: 29 QPGPEGADS-DEHVRSSPMRKGSPTT--RCRLGDRCRSEPMRCHCHHC 163
Q G DS D SP R+ SP + GD C S P HC C
Sbjct: 345 QRGDGTPDSTDTQKGCSPQRELSPESDPSTSSGDSCPSPPKMLHCKEC 392
>U41039-3|AAK68627.2| 537|Caenorhabditis elegans Synapse defective
protein 9, isoformc protein.
Length = 537
Score = 27.5 bits (58), Expect = 9.4
Identities = 18/48 (37%), Positives = 20/48 (41%), Gaps = 3/48 (6%)
Frame = +2
Query: 29 QPGPEGADS-DEHVRSSPMRKGSPTT--RCRLGDRCRSEPMRCHCHHC 163
Q G DS D SP R+ SP + GD C S P HC C
Sbjct: 328 QRGDGTPDSTDTQKGCSPQRELSPESDPSTSSGDSCPSPPKMLHCKEC 375
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,884,083
Number of Sequences: 27780
Number of extensions: 345242
Number of successful extensions: 1227
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1078
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1217
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1550199966
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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