Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV13d07f
(641 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like p... 55 4e-08
U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like p... 52 3e-07
AF003384-12|AAB54236.2| 331|Caenorhabditis elegans Trypsin-like... 36 0.033
U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like pr... 34 0.099
Z81546-9|CAD45596.2| 782|Caenorhabditis elegans Hypothetical pr... 31 0.93
AY313179-1|AAP79304.1| 782|Caenorhabditis elegans myotubularin-... 31 0.93
AF043698-2|AAB97559.3| 700|Caenorhabditis elegans Hypothetical ... 29 3.7
AC006695-9|AAF39977.1| 453|Caenorhabditis elegans Hypothetical ... 29 3.7
AF003134-1|AAB54144.1| 522|Caenorhabditis elegans Trypsin-like ... 28 4.9
U42832-2|AAA83572.1| 558|Caenorhabditis elegans Udp-glucuronosy... 28 6.5
Z78013-9|CAB01420.2| 297|Caenorhabditis elegans Hypothetical pr... 27 8.6
U00065-7|AAL02474.1| 1090|Caenorhabditis elegans Hypothetical pr... 27 8.6
U00065-6|AAL02472.1| 1051|Caenorhabditis elegans Hypothetical pr... 27 8.6
>U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like
protease protein 2 protein.
Length = 265
Score = 55.2 bits (127), Expect = 4e-08
Identities = 46/143 (32%), Positives = 66/143 (46%), Gaps = 7/143 (4%)
Frame = +1
Query: 130 RNARIVGGSQAAQGSHPHMVAMTNGIFIRSFVCGGSVLTARSVLTAAHCIVAVFTLGSLS 309
R AR+VGG + G+ P A+ N ++ CG S+L ++TAAHC F
Sbjct: 23 RIARVVGGFETVPGAFPWTAALRNKA-TKAHHCGASILDKTHLITAAHC----FEEDERV 77
Query: 310 GNLRLTVG---TNQWNSGGSLHTVSRNITHPHYVSNTIKNDLGIL-ITSSNIVFNNRVRP 477
+ + VG NQ + + + R +P Y + +D+ IL I I FN +P
Sbjct: 78 SSYEVVVGDWDNNQTDGNEQIFYLQRIHFYPLY-KDIFSHDIAILEIPYPGIEFNEYAQP 136
Query: 478 ISL---SFDYVPGGVPVRVAGWG 537
I L F Y PG V V+GWG
Sbjct: 137 ICLPSKDFVYTPGRQCV-VSGWG 158
>U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like
protease protein 1 protein.
Length = 293
Score = 52.4 bits (120), Expect = 3e-07
Identities = 49/168 (29%), Positives = 76/168 (45%), Gaps = 3/168 (1%)
Frame = +1
Query: 118 EHVDRNARIVGGSQAAQGSHPHMVAMTNGIFIRSFVCGGSVLTARSVLTAAHCIVAVFTL 297
++V + R++GGS+++ S P V + + + CGGS++ VLTAAHC F
Sbjct: 50 DYVTLDHRLIGGSESSPHSWPWTVQLLSRLGHHR--CGGSLIDPNFVLTAAHC----FAK 103
Query: 298 GSLSGNLRLTVGTNQWNSGGSLHTVSRNITHPHY-VSNTIKNDLGILITSSNIVFNNRVR 474
+ + VG ++ + GS H V+ HP Y + D I+ + + R
Sbjct: 104 DRRPTSYSVRVGGHR-SGSGSPHRVTAVSIHPWYNIGFPSSYDFAIMRIHPPVNTSTTAR 162
Query: 475 PISL-SFDYVPGGVPVRVAGWGRVRANGALST-NLLEINVRTIDGQTC 612
PI L S V + V V GWG +LS L EI+V + C
Sbjct: 163 PICLPSLPAVENRLCV-VTGWGSTIEGSSLSAPTLREIHVPLLSTLFC 209
>AF003384-12|AAB54236.2| 331|Caenorhabditis elegans Trypsin-like
protease protein 5 protein.
Length = 331
Score = 35.5 bits (78), Expect = 0.033
Identities = 22/58 (37%), Positives = 27/58 (46%), Gaps = 5/58 (8%)
Frame = +1
Query: 223 VCGGSVLTARSVLTAAHCIVAVFTLGSLSGNLRLTVG--TNQW---NSGGSLHTVSRN 381
+CGG+++T + VLTAAHC F G G W NS GSL RN
Sbjct: 61 ICGGTLITLKHVLTAAHCFQKHFGAKKEGGEENSMSGRYCESWVIYNSEGSLEIYFRN 118
>U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like
protease protein 3 protein.
Length = 313
Score = 33.9 bits (74), Expect = 0.099
Identities = 28/119 (23%), Positives = 52/119 (43%)
Frame = +1
Query: 139 RIVGGSQAAQGSHPHMVAMTNGIFIRSFVCGGSVLTARSVLTAAHCIVAVFTLGSLSGNL 318
RI+GG+ G++ ++ G + +CG +V+ ++TAAHC + + T
Sbjct: 37 RIIGGNSIDDGANWMAKLVSYGDNGQGILCGATVIDDFWLVTAAHCALQLQTRS------ 90
Query: 319 RLTVGTNQWNSGGSLHTVSRNITHPHYVSNTIKNDLGILITSSNIVFNNRVRPISLSFD 495
N+ +V H Y + T ND+ +L SS++ ++P+ L D
Sbjct: 91 -FVYVREPKNNRERSFSVKEAYIHSGYNNQTADNDIALLRISSDL-SKLGIKPVCLVHD 147
>Z81546-9|CAD45596.2| 782|Caenorhabditis elegans Hypothetical
protein F53A2.8b protein.
Length = 782
Score = 30.7 bits (66), Expect = 0.93
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 56 WRSLRLPGPSPSLKMTCPSSTSMWTGTLVLWG 151
W ++ L G PS+ + PSS+S W+ V G
Sbjct: 16 WNNMSLSGIYPSISTSTPSSSSSWSSHFVFGG 47
>AY313179-1|AAP79304.1| 782|Caenorhabditis elegans
myotubularin-related protein MTM-6B protein.
Length = 782
Score = 30.7 bits (66), Expect = 0.93
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 56 WRSLRLPGPSPSLKMTCPSSTSMWTGTLVLWG 151
W ++ L G PS+ + PSS+S W+ V G
Sbjct: 16 WNNMSLSGIYPSISTSTPSSSSSWSSHFVFGG 47
>AF043698-2|AAB97559.3| 700|Caenorhabditis elegans Hypothetical
protein C54G6.2 protein.
Length = 700
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/50 (28%), Positives = 21/50 (42%)
Frame = -2
Query: 151 PPQYERSGPHARRRWTCHLQAWGGPRQPQRAPQKVFRILCSFLPSPESDY 2
P Y + H RRR + + PRQP+ + R+ + E DY
Sbjct: 73 PNPYNTAPTHYRRRSSTEAHRYHPPRQPRSSAPTHHRVPADYPSDEEDDY 122
>AC006695-9|AAF39977.1| 453|Caenorhabditis elegans Hypothetical
protein W06H8.2 protein.
Length = 453
Score = 28.7 bits (61), Expect = 3.7
Identities = 17/62 (27%), Positives = 31/62 (50%)
Frame = -3
Query: 228 ADKAPDEDTISHCYHMGVAALSCLATPHNTSVPVHMLVEDGHVIFRLGEGPGSRKERHKK 49
A+ P ++ I+ G + T + PVH+ +IF+ GE P +R+E +KK
Sbjct: 50 ANGVPTQEIINVYDKWGNGQFGVILTGNVQVSPVHLEAPGNAMIFKEGETP-ARREAYKK 108
Query: 48 YS 43
++
Sbjct: 109 WA 110
>AF003134-1|AAB54144.1| 522|Caenorhabditis elegans Trypsin-like
protease protein 7 protein.
Length = 522
Score = 28.3 bits (60), Expect = 4.9
Identities = 14/61 (22%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +1
Query: 100 DMSIFYEHVDRNARIVGGSQAAQGSHPHMVA--MTNGIFIRSFVCGGSVLTARSVLTAAH 273
+M +++ + +A++ G A+Q P V + + + C G++++ R +L A H
Sbjct: 149 EMILYWLRIPFSAKVYNGRDASQSEAPWSVFTYLYSKDEQSATTCTGTIVSPRHILIATH 208
Query: 274 C 276
C
Sbjct: 209 C 209
>U42832-2|AAA83572.1| 558|Caenorhabditis elegans
Udp-glucuronosyltransferase protein57 protein.
Length = 558
Score = 27.9 bits (59), Expect = 6.5
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = -1
Query: 329 TVRRRFPERLPSVNTATMQ*AAVSTERAVSTEPPQTKLLMKIPL 198
T+++RF + P+VNT Q AA EPP+ L IP+
Sbjct: 243 TIKKRF-KNFPNVNTLKQQSAAYFVNTDPLLEPPRALPLNVIPV 285
>Z78013-9|CAB01420.2| 297|Caenorhabditis elegans Hypothetical
protein F15B9.5 protein.
Length = 297
Score = 27.5 bits (58), Expect = 8.6
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +1
Query: 223 VCGGSVLTARSVLTAAHCI 279
VCGG ++ V+T+AHC+
Sbjct: 45 VCGGVLIAPSIVITSAHCV 63
>U00065-7|AAL02474.1| 1090|Caenorhabditis elegans Hypothetical
protein D1044.2c protein.
Length = 1090
Score = 27.5 bits (58), Expect = 8.6
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = -3
Query: 327 CQTKISRETSKCEYSNNAMSSGEHRACGE 241
CQT+ + +K + ++NA+S ++ CGE
Sbjct: 360 CQTRQEKCATKTQCASNALSFNDYDRCGE 388
>U00065-6|AAL02472.1| 1051|Caenorhabditis elegans Hypothetical
protein D1044.2a protein.
Length = 1051
Score = 27.5 bits (58), Expect = 8.6
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = -3
Query: 327 CQTKISRETSKCEYSNNAMSSGEHRACGE 241
CQT+ + +K + ++NA+S ++ CGE
Sbjct: 360 CQTRQEKCATKTQCASNALSFNDYDRCGE 388
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,565,758
Number of Sequences: 27780
Number of extensions: 338333
Number of successful extensions: 1123
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1016
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1116
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1427403330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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