Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV13c10f
(622 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_0657 - 19749835-19751942,19753123-19753561 30 1.3
03_05_0623 - 26208309-26208343,26208931-26210220,26210350-26210419 30 1.3
01_03_0263 + 14397549-14412911,14413023-14413787,14413950-14414132 30 1.3
01_02_0019 + 10262685-10262909,10263014-10263076,10263155-102633... 30 1.3
05_03_0288 - 11653136-11654074,11655252-11655965 30 1.7
02_01_0348 - 2506007-2506909,2507003-2508120,2508230-2508883,250... 30 1.7
11_06_0176 + 20929629-20929791,20929918-20930333,20930449-209307... 29 2.3
10_01_0194 + 2130274-2131725 29 2.3
12_02_0035 - 12563503-12564405,12564494-12565611,12565709-125662... 29 3.9
07_03_0115 - 13574601-13574645,13574710-13574781,13575990-13576469 29 3.9
07_01_0805 + 6295448-6296264,6296362-6297479,6297565-6298467 29 3.9
01_06_1575 + 38339970-38340786,38340884-38342001,38342099-38343055 29 3.9
06_03_1180 + 28218386-28218649,28218725-28219202,28219309-282196... 28 5.2
05_07_0140 - 27982037-27983794 28 5.2
09_04_0541 + 18437075-18440062 28 6.9
08_02_0499 - 17820615-17822516,17823224-17823373,17823491-178235... 28 6.9
02_05_0740 - 31404004-31404180,31404365-31405261,31405351-314059... 28 6.9
11_01_0170 - 1373986-1374013,1374061-1374326,1374693-1374926,137... 27 9.1
09_06_0201 - 21545189-21545494,21545593-21545743,21545835-215460... 27 9.1
09_02_0362 + 7860088-7860197,7861606-7861636,7861738-7861801,786... 27 9.1
01_01_0167 + 1422344-1424260,1424338-1424472,1424568-1424990,142... 27 9.1
>08_02_0657 - 19749835-19751942,19753123-19753561
Length = 848
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +1
Query: 472 DNVDAPVEDADLQVAPVNIVDEPVEKTNEEIENDSEVGSISWVEYPAE 615
D +AP + +L V + +V +P KT E+E ++E + + E A+
Sbjct: 769 DEEEAPATEPELPVGQLRLVAKPKTKTKAELEAEAEAAAKAKAEAEAK 816
>03_05_0623 - 26208309-26208343,26208931-26210220,26210350-26210419
Length = 464
Score = 30.3 bits (65), Expect = 1.3
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = -3
Query: 266 KSTLSTGISMSK-IATLSTFSLNSIPAKASS*MTSSGMMYIPASMLSYFGIGISAIWTGL 90
++ TGIS+ +A SL + PA AS + ++ + ++PAS +S +G + +G
Sbjct: 69 RALAGTGISLVVGVANGDIPSLAADPAAASRWLAANVLPFVPASTISVVAVGNEVLESGD 128
Query: 89 IDAAAA 72
AAA
Sbjct: 129 ASLAAA 134
>01_03_0263 + 14397549-14412911,14413023-14413787,14413950-14414132
Length = 5436
Score = 30.3 bits (65), Expect = 1.3
Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Frame = +1
Query: 163 DEVIQELALAGIELSENVDNVAIFDIE-IPVDNVDFPVDSVNFVENVEAPVENADFPADS 339
D I ELA +++ N D AI +I+ I +D +F D + + + +N A
Sbjct: 1364 DAKITELAQTNLDIKNNADQRAIQNIQCINMDEAEFVTDDLK-SDCLAMHADNVQRDASL 1422
Query: 340 VSFVENLDAPVEDAD 384
+E A +E AD
Sbjct: 1423 TKNIEESSASLEGAD 1437
>01_02_0019 +
10262685-10262909,10263014-10263076,10263155-10263316,
10263407-10263589,10263676-10263806,10264251-10264419,
10264524-10264653,10265702-10265898
Length = 419
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +1
Query: 496 DADLQVAPVNIVDEPVEKTNEEIENDSEVGSIS 594
+A+LQ ++ ++PV NEE ND +V S+S
Sbjct: 376 EAELQDEFPHVQEDPVSHANEEFPNDEDVDSLS 408
>05_03_0288 - 11653136-11654074,11655252-11655965
Length = 550
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/51 (23%), Positives = 26/51 (50%)
Frame = +1
Query: 97 VQIADIPIPKYESIDAGMYIIPDEVIQELALAGIELSENVDNVAIFDIEIP 249
V ++ +P+ E + G ++P ++ +A+ G+E+ N V +F P
Sbjct: 109 VMVSFFGLPEKEVVRIGKAVLPKFFLEGMAMEGLEVVRNAKKVVVFSPLFP 159
>02_01_0348 -
2506007-2506909,2507003-2508120,2508230-2508883,
2508920-2509046
Length = 933
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +1
Query: 472 DNVDAPVEDADLQVAPVNIVDEPVEKTNEEIENDSEVGSIS 594
D+ D VED D ++ N +E E+ +E ENDS S S
Sbjct: 331 DDDDVEVEDVDEEIGEENAEEEEEEEGADEEENDSSDDSDS 371
>11_06_0176 +
20929629-20929791,20929918-20930333,20930449-20930736,
20931034-20931147,20931245-20931352,20931701-20931744,
20933106-20933200,20934103-20934182,20934278-20934391,
20934476-20934628,20934740-20934832
Length = 555
Score = 29.5 bits (63), Expect = 2.3
Identities = 17/59 (28%), Positives = 29/59 (49%)
Frame = +1
Query: 118 IPKYESIDAGMYIIPDEVIQELALAGIELSENVDNVAIFDIEIPVDNVDFPVDSVNFVE 294
+P Y ++D I PD +EL ++ +E E D+ + DI + D D + FV+
Sbjct: 173 LPTYVALDLAKSIEPDADKEELRMSVVEPIEKADDPSSHDIPVGSTKGDEYDDRICFVK 231
Score = 27.5 bits (58), Expect = 9.1
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +1
Query: 496 DADLQVAPVNIVDEPVEKTNEEIENDSEVGSISWVEY 606
DAD + +++V EP+EK ++ +D VGS EY
Sbjct: 188 DADKEELRMSVV-EPIEKADDPSSHDIPVGSTKGDEY 223
>10_01_0194 + 2130274-2131725
Length = 483
Score = 29.5 bits (63), Expect = 2.3
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = -2
Query: 318 ILNWSFDIFYEVYRINREIDVVNGNFNVKNRNVVYIFAQ 202
+L W+ D+ + + +NR I V NF++ ++V +F Q
Sbjct: 351 VLRWNLDVNFWISILNRCITVAEKNFSLYGKHVRSLFEQ 389
>12_02_0035 -
12563503-12564405,12564494-12565611,12565709-12566239,
12566337-12567153
Length = 1122
Score = 28.7 bits (61), Expect = 3.9
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +1
Query: 472 DNVDAPVEDADLQVAPVNIVDEPVEKTNEEIENDS 576
D+ D VED D ++ N +E E+ +E ENDS
Sbjct: 343 DDDDVEVEDIDEEIGEENAEEEEGEEGADEEENDS 377
Score = 28.7 bits (61), Expect = 3.9
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +1
Query: 472 DNVDAPVEDADLQVAPVNIVDEPVEKTNEEIENDS 576
D+ D VED D ++ N +E E+ +E ENDS
Sbjct: 520 DDDDVEVEDIDEEIGEENAEEEEGEEGADEEENDS 554
>07_03_0115 - 13574601-13574645,13574710-13574781,13575990-13576469
Length = 198
Score = 28.7 bits (61), Expect = 3.9
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = +3
Query: 57 RTHWSGGRRINQTRPNRGYPNTEIRKHRRWNVHHPRRSHSRTRLG 191
R W G + +TR R +P RRW H PRR T +G
Sbjct: 10 RWRWGGASSLARTRRRRLFP-----AWRRWIRHCPRRIRPETAVG 49
>07_01_0805 + 6295448-6296264,6296362-6297479,6297565-6298467
Length = 945
Score = 28.7 bits (61), Expect = 3.9
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +1
Query: 472 DNVDAPVEDADLQVAPVNIVDEPVEKTNEEIENDS 576
D+ D VED D ++ N +E E+ +E ENDS
Sbjct: 343 DDDDVEVEDIDEEIGEENAEEEEGEEGADEEENDS 377
>01_06_1575 + 38339970-38340786,38340884-38342001,38342099-38343055
Length = 963
Score = 28.7 bits (61), Expect = 3.9
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +1
Query: 472 DNVDAPVEDADLQVAPVNIVDEPVEKTNEEIENDS 576
D+ D VED D ++ N +E E+ +E ENDS
Sbjct: 343 DDDDVEVEDIDEEIGEENAEEEEGEEGADEEENDS 377
>06_03_1180 +
28218386-28218649,28218725-28219202,28219309-28219697,
28219785-28220426,28220466-28221368
Length = 891
Score = 28.3 bits (60), Expect = 5.2
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +1
Query: 472 DNVDAPVEDADLQVAPVNIVDEPVEKTNEEIENDSEVGSIS 594
D+ D +ED D ++ N +E E+ +E ENDS S S
Sbjct: 318 DDDDVELEDVDEEIGEENAEEEEGEEGADEEENDSSDDSDS 358
>05_07_0140 - 27982037-27983794
Length = 585
Score = 28.3 bits (60), Expect = 5.2
Identities = 18/54 (33%), Positives = 22/54 (40%)
Frame = -1
Query: 535 HPRCSQGRLVNRRPQLEHRRCLRS*QNQPGHRRPQLEHRRCLRSLQNQPGHRRP 374
HPR N+RPQL R R + + R + E R R QN H P
Sbjct: 101 HPRFGPKWRFNQRPQLPQR---RDEEVEARRREAEKERARRERHFQNNRSHHHP 151
>09_04_0541 + 18437075-18440062
Length = 995
Score = 27.9 bits (59), Expect = 6.9
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +2
Query: 77 PPHQSNPSKSRISQYRNTKASTLECTSSPT 166
PP Q P R Q+R TKAS + ++ T
Sbjct: 82 PPQQPQPQTPRQRQHRETKASDVAAAAAST 111
>08_02_0499 - 17820615-17822516,17823224-17823373,17823491-17823568,
17823948-17824061,17824145-17824297,17826928-17827071,
17827162-17827516,17828574-17828741,17829522-17829751,
17829916-17830049,17830686-17830749
Length = 1163
Score = 27.9 bits (59), Expect = 6.9
Identities = 22/92 (23%), Positives = 38/92 (41%)
Frame = -1
Query: 544 QLVHPRCSQGRLVNRRPQLEHRRCLRS*QNQPGHRRPQLEHRRCLRSLQNQPGHRRPQLE 365
Q+ + Q + ++ QL+ ++ Q QP + QL R QN+P Q++
Sbjct: 975 QVQQQQQQQQQQQQQQQQLQLQQHALPVQQQPDQKYSQLPSSGDTRHEQNKPQKLESQMD 1034
Query: 364 HRGFLRSLQSQPGNRHSQLELRHFLRSLQNQQ 269
H+ L Q + Q+ L + Q QQ
Sbjct: 1035 HQSELVQQQQVYFQQQQQMYLMQQQQMYQQQQ 1066
>02_05_0740 -
31404004-31404180,31404365-31405261,31405351-31405978,
31405997-31406468,31406575-31407052
Length = 883
Score = 27.9 bits (59), Expect = 6.9
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +1
Query: 481 DAPVEDADLQVAPVNIVDEPVEKTNEEIENDSEVGSIS 594
D VED D ++ N +E E+ +E ENDS S S
Sbjct: 233 DVEVEDVDEEIGEENAEEEEGEEGADEEENDSSDDSDS 270
>11_01_0170 -
1373986-1374013,1374061-1374326,1374693-1374926,
1375034-1375171,1375255-1375557,1376008-1376172,
1376469-1376933
Length = 532
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/55 (23%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Frame = -2
Query: 327 EIGILNWSFDIFYEVYRINREIDVV--NGNFNVKNRNVVYIFAQFNPGQGEFLND 169
EI ++ F + ++ ++ ++V+ + + NV + V+ I +F+P EF++D
Sbjct: 188 EIRDMSIEFQFWESMHSVSSSVEVIWQSNHSNVPVQQVIEIPPEFDPDSSEFVSD 242
>09_06_0201 -
21545189-21545494,21545593-21545743,21545835-21546072,
21546158-21546365,21546446-21546639,21546721-21546819,
21546886-21546922,21548242-21548775
Length = 588
Score = 27.5 bits (58), Expect = 9.1
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +1
Query: 262 DFPVDSVNFVENVEAPVENADFPADSVSFVENLDAPVEDAD 384
D PV +V +V N E PV N ++S ++ D V DAD
Sbjct: 72 DIPVRTVVWVANQETPVTN----GTALSLTDSSDLVVSDAD 108
>09_02_0362 +
7860088-7860197,7861606-7861636,7861738-7861801,
7861922-7862052,7863575-7863784,7863891-7863956,
7864868-7865075,7866270-7866325,7866406-7867128,
7868246-7868299,7868667-7868695,7869501-7869585,
7870032-7870202,7870246-7870827
Length = 839
Score = 27.5 bits (58), Expect = 9.1
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 7/85 (8%)
Frame = -1
Query: 454 QPGHRRPQLEHRRCLRSLQNQPGHRRPQLEHRGFLRS-------LQSQPGNRHSQLELRH 296
QP ++ QL+ ++ QNQ H++ QL+ + L+ LQ Q +H QL+ +
Sbjct: 651 QPPMQQQQLQQQQNQLQQQNQL-HQQHQLQPQNQLQQQHQLQQQLQQQQLQQHMQLQTQG 709
Query: 295 FLRSLQNQQGNRRCQREFQCQKSQR 221
Q QG+ Q++ Q + Q+
Sbjct: 710 LPLQQQQSQGHPLQQQQMQQMQQQQ 734
>01_01_0167 +
1422344-1424260,1424338-1424472,1424568-1424990,
1425183-1425252,1425356-1425495,1425620-1425679,
1425776-1425931,1426272-1426541
Length = 1056
Score = 27.5 bits (58), Expect = 9.1
Identities = 9/27 (33%), Positives = 19/27 (70%)
Frame = +1
Query: 157 IPDEVIQELALAGIELSENVDNVAIFD 237
+PD ++ L + G+E +E++D+V + D
Sbjct: 106 LPDNKVRVLWIDGVEKTEDIDSVVVMD 132
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.314 0.135 0.395
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,273,901
Number of Sequences: 37544
Number of extensions: 322533
Number of successful extensions: 817
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 763
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 816
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1502076244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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