Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV13c03f
(609 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 26 0.25
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 25 0.44
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 24 1.3
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 24 1.3
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 24 1.3
AB086196-1|BAD06465.1| 289|Apis mellifera Period protein. 24 1.3
AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein. 23 1.8
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 23 2.3
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 23 3.1
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 23 3.1
DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor pro... 22 4.1
DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor pro... 22 4.1
AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled rec... 22 4.1
EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. 22 5.4
EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein. 22 5.4
AY739659-1|AAU85298.1| 288|Apis mellifera hyperpolarization-act... 22 5.4
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 22 5.4
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 22 5.4
AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein. 22 5.4
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 21 7.1
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 21 7.1
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 21 7.1
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 21 7.1
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 21 9.4
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 26.2 bits (55), Expect = 0.25
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = -1
Query: 201 NPHPSGGLHVVYSPPDGGDPRAQHHCHHEHNQPCAAEHAHY 79
+PH G H + P G P HH H+Q + +H HY
Sbjct: 333 SPHHQHGNHTM--GPTMGPPH-----HHHHHQTQSLQHLHY 366
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 25.4 bits (53), Expect = 0.44
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +1
Query: 415 PPFLLQSIEENKKKSRNLYNPTANGRQSDTNP 510
PP ++ EE KKK++ +P+ N + + P
Sbjct: 530 PPSSMKETEEEKKKTKQSLSPSENQSKMEILP 561
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 23.8 bits (49), Expect = 1.3
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +1
Query: 76 IIVSVFSCAWLVVFVMAVV 132
II+S F WL FV+A+V
Sbjct: 376 IIMSAFIVCWLPFFVLALV 394
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 23.8 bits (49), Expect = 1.3
Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = +1
Query: 352 GQFVEELT--REIDQRQQRQSTAPPFLLQSIEENKKKSRNLYNPTANGRQSDT 504
G ELT +EI RQ+R+S P+L EN K +Y GR SD+
Sbjct: 449 GFLAGELTYSQEIGDRQERESELVPYL-----EN--KGNGVYAWIGAGRDSDS 494
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 23.8 bits (49), Expect = 1.3
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -2
Query: 386 SISLVNSSTNCPPVCRSEGLALSTSPSLPTYMEY 285
SIS N C + +GL L T+PS+ T + Y
Sbjct: 156 SISQANEGF-CAVISMHDGLVLYTTPSICTALGY 188
>AB086196-1|BAD06465.1| 289|Apis mellifera Period protein.
Length = 289
Score = 23.8 bits (49), Expect = 1.3
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -2
Query: 386 SISLVNSSTNCPPVCRSEGLALSTSPSLPTYMEY 285
SIS N C + +GL L T+PS+ T + Y
Sbjct: 151 SISQANEGF-CAVISMHDGLVLYTTPSICTALGY 183
>AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein.
Length = 349
Score = 23.4 bits (48), Expect = 1.8
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +1
Query: 70 TIIIVSVFSCAWLVVFVMAV 129
T+II++VF W +VM++
Sbjct: 262 TVIIIAVFFICWTPYYVMSL 281
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 23.0 bits (47), Expect = 2.3
Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Frame = -3
Query: 295 TWSTLAWTTPH--QEPGPGCGMRGSYLNSFSVFEP 197
+W TL WT H +P G+ Y+ S ++ P
Sbjct: 93 SWMTLMWTDSHLSWKPSDFDGINYIYVKSDDIWVP 127
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 22.6 bits (46), Expect = 3.1
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = -3
Query: 208 VFEPSSVRWPACRLLSA*WRR 146
+F SS++W + L WRR
Sbjct: 488 IFMSSSLQWSSTHTLDVAWRR 508
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 22.6 bits (46), Expect = 3.1
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = -3
Query: 208 VFEPSSVRWPACRLLSA*WRR 146
+F SS++W + L WRR
Sbjct: 526 IFMSSSLQWSSTHTLDVAWRR 546
>DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 22.2 bits (45), Expect = 4.1
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +1
Query: 76 IIVSVFSCAWLVVFVMAVVL 135
+I+ VF WL F+M V++
Sbjct: 331 VIMGVFVVCWLPFFLMYVIV 350
>DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 22.2 bits (45), Expect = 4.1
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +1
Query: 76 IIVSVFSCAWLVVFVMAVVL 135
+I+ VF WL F+M V++
Sbjct: 331 VIMGVFVVCWLPFFLMYVIV 350
>AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled
receptor protein.
Length = 399
Score = 22.2 bits (45), Expect = 4.1
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +1
Query: 76 IIVSVFSCAWLVVFVMAVVL 135
+I+ VF WL F+M V++
Sbjct: 331 VIMGVFVVCWLPFFLMYVIV 350
>EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein.
Length = 686
Score = 21.8 bits (44), Expect = 5.4
Identities = 7/16 (43%), Positives = 14/16 (87%)
Frame = -1
Query: 525 LVNKIGISIALASICG 478
+++K+ + +ALA+ICG
Sbjct: 1 MLSKVVLLVALAAICG 16
>EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein.
Length = 686
Score = 21.8 bits (44), Expect = 5.4
Identities = 7/16 (43%), Positives = 14/16 (87%)
Frame = -1
Query: 525 LVNKIGISIALASICG 478
+++K+ + +ALA+ICG
Sbjct: 1 MLSKVVLLVALAAICG 16
>AY739659-1|AAU85298.1| 288|Apis mellifera
hyperpolarization-activated ion channelvariant T
protein.
Length = 288
Score = 21.8 bits (44), Expect = 5.4
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -3
Query: 271 TPHQEPGPG 245
TP +EPGPG
Sbjct: 21 TPKEEPGPG 29
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 21.8 bits (44), Expect = 5.4
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -3
Query: 271 TPHQEPGPG 245
TP +EPGPG
Sbjct: 21 TPKEEPGPG 29
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 21.8 bits (44), Expect = 5.4
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -3
Query: 271 TPHQEPGPG 245
TP +EPGPG
Sbjct: 21 TPKEEPGPG 29
>AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein.
Length = 366
Score = 21.8 bits (44), Expect = 5.4
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = -1
Query: 192 PSGGLHVVYSPPDGGD-PRAQHHCHHEHNQPCAAEHAHY 79
PS L + SPP+ D P Q H HH H+ + + Y
Sbjct: 51 PSTHLMDLSSPPEHRDLPIYQSH-HHLHHHQVLYQQSPY 88
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 21.4 bits (43), Expect = 7.1
Identities = 11/44 (25%), Positives = 21/44 (47%)
Frame = +1
Query: 355 QFVEELTREIDQRQQRQSTAPPFLLQSIEENKKKSRNLYNPTAN 486
+F+E T I S ++ + E+KKK++ +N +N
Sbjct: 1468 RFIEVATNSITLHLNAWSDGGCPMIYFVVEHKKKNQQEWNQVSN 1511
Score = 21.4 bits (43), Expect = 7.1
Identities = 9/24 (37%), Positives = 9/24 (37%)
Frame = -1
Query: 198 PHPSGGLHVVYSPPDGGDPRAQHH 127
PHP G PP G A H
Sbjct: 1749 PHPGNGHSGTMGPPVGHPTNASAH 1772
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 21.4 bits (43), Expect = 7.1
Identities = 7/29 (24%), Positives = 17/29 (58%)
Frame = +3
Query: 327 QTFGAADGWAVRRRVN*RDRPEAAEAVDR 413
++F + +V RR++ ++RP + +R
Sbjct: 127 KSFSVKENLSVHRRIHTKERPYKCDVCER 155
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.4 bits (43), Expect = 7.1
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -1
Query: 354 PTRLPLRRSGAFHVAIAAHVHGVPSP 277
PT + + R+ HVA+ GVP+P
Sbjct: 716 PTDVSVERNK--HVALHCQAQGVPTP 739
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 21.4 bits (43), Expect = 7.1
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -1
Query: 354 PTRLPLRRSGAFHVAIAAHVHGVPSP 277
PT + + R+ HVA+ GVP+P
Sbjct: 712 PTDVSVERNK--HVALHCQAQGVPTP 735
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.0 bits (42), Expect = 9.4
Identities = 7/17 (41%), Positives = 12/17 (70%)
Frame = -1
Query: 117 EHNQPCAAEHAHYYDRF 67
+H+Q ++EHA +RF
Sbjct: 105 QHHQDSSSEHASNQERF 121
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,491
Number of Sequences: 438
Number of extensions: 4126
Number of successful extensions: 28
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17971191
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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