Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV13c01f
         (396 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118515-1|AAM49884.1|   66|Drosophila melanogaster LD14731p pro...    55   3e-08
AE013599-996|AAO41466.1|   66|Drosophila melanogaster CG2249-PB,...    55   3e-08
AE013599-995|AAF58857.2|   66|Drosophila melanogaster CG2249-PA,...    55   3e-08
Y00402-1|CAA68463.1|  647|Drosophila melanogaster protein ( Dros...    28   5.2  
AY122152-1|AAM52664.1|  121|Drosophila melanogaster LD05816p pro...    27   9.0  
AE014298-1489|AAF46617.1|  121|Drosophila melanogaster CG32672-P...    27   9.0  
AE014297-4114|AAF56695.2| 1120|Drosophila melanogaster CG3368-PA...    27   9.0  

>AY118515-1|AAM49884.1|   66|Drosophila melanogaster LD14731p
           protein.
          Length = 66

 Score = 55.2 bits (127), Expect = 3e-08
 Identities = 25/58 (43%), Positives = 36/58 (62%)
 Frame = +2

Query: 92  VGKNVVKTSVRSGSNGGIPGENLPFDINNKARLTFHMFWFFGSGFAAPFLVVWHQMRK 265
           + +N  ++ VR   +GG+PGENLPF + NK R+T         GF +PFL+V HQ+ K
Sbjct: 8   IARNFSQSMVRFSGHGGVPGENLPFGLTNKYRITALFTIGCVLGFGSPFLIVRHQLLK 65


>AE013599-996|AAO41466.1|   66|Drosophila melanogaster CG2249-PB,
           isoform B protein.
          Length = 66

 Score = 55.2 bits (127), Expect = 3e-08
 Identities = 25/58 (43%), Positives = 36/58 (62%)
 Frame = +2

Query: 92  VGKNVVKTSVRSGSNGGIPGENLPFDINNKARLTFHMFWFFGSGFAAPFLVVWHQMRK 265
           + +N  ++ VR   +GG+PGENLPF + NK R+T         GF +PFL+V HQ+ K
Sbjct: 8   IARNFSQSMVRFSGHGGVPGENLPFGLTNKYRITALFTIGCVLGFGSPFLIVRHQLLK 65


>AE013599-995|AAF58857.2|   66|Drosophila melanogaster CG2249-PA,
           isoform A protein.
          Length = 66

 Score = 55.2 bits (127), Expect = 3e-08
 Identities = 25/58 (43%), Positives = 36/58 (62%)
 Frame = +2

Query: 92  VGKNVVKTSVRSGSNGGIPGENLPFDINNKARLTFHMFWFFGSGFAAPFLVVWHQMRK 265
           + +N  ++ VR   +GG+PGENLPF + NK R+T         GF +PFL+V HQ+ K
Sbjct: 8   IARNFSQSMVRFSGHGGVPGENLPFGLTNKYRITALFTIGCVLGFGSPFLIVRHQLLK 65


>Y00402-1|CAA68463.1|  647|Drosophila melanogaster protein (
           Drosophila melanogastermRNA for phosphoenolpyruvate
           carboxykinase  (GTP) (PEPCK,EC 4.1.1.32).  ).
          Length = 647

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = +2

Query: 77  ISNRTVGKNVVKTSVRSGSNGGIPGENLPFDINNKARLT 193
           I+  TV KN + T+V S S+GG+  E +   +    R+T
Sbjct: 372 IAMNTVFKNTIFTNVASTSDGGVFWEGMESSLAPNVRIT 410


>AY122152-1|AAM52664.1|  121|Drosophila melanogaster LD05816p
           protein.
          Length = 121

 Score = 27.1 bits (57), Expect = 9.0
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = -3

Query: 394 FFLLVYLRFHLHKYKSIVNFIHSGLPPTS 308
           F+ L+  R HL    ++  F+++ +PPTS
Sbjct: 60  FYFLIRKRIHLRPEDALFFFVNNVIPPTS 88


>AE014298-1489|AAF46617.1|  121|Drosophila melanogaster CG32672-PA
           protein.
          Length = 121

 Score = 27.1 bits (57), Expect = 9.0
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = -3

Query: 394 FFLLVYLRFHLHKYKSIVNFIHSGLPPTS 308
           F+ L+  R HL    ++  F+++ +PPTS
Sbjct: 60  FYFLIRKRIHLRPEDALFFFVNNVIPPTS 88


>AE014297-4114|AAF56695.2| 1120|Drosophila melanogaster CG3368-PA
           protein.
          Length = 1120

 Score = 27.1 bits (57), Expect = 9.0
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +1

Query: 31  LK*VKENQNDRSSCKDFQQDRWE 99
           LK + ENQ   + C D   DRWE
Sbjct: 836 LKRLNENQTAETVCLDSNHDRWE 858


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,795,887
Number of Sequences: 53049
Number of extensions: 346327
Number of successful extensions: 843
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 833
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 840
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1128794130
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)