Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV13b23r
         (695 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    25   0.91 
DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.              22   4.8  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    22   4.8  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 24.6 bits (51), Expect = 0.91
 Identities = 11/41 (26%), Positives = 21/41 (51%)
 Frame = -2

Query: 181 SVRTNHLVGRRCGNIWEAELSNCNGGTLHMGNGNFGKRGSG 59
           ++ + H +  +C  +  +E  NCN G+L +   NF  +  G
Sbjct: 73  TITSYHRINLKCSLVEFSENKNCNAGSLTV-KKNFANKYCG 112


>DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.
          Length = 135

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -2

Query: 376 WGGNSNALNRNAGHYVECI 320
           + GN N  + N   YVEC+
Sbjct: 48  YNGNVNVEDENVQSYVECM 66


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +1

Query: 19  FRKARRCEFSNRRGRIR 69
           F+   RC+ SN+R R R
Sbjct: 74  FKSLPRCQLSNKRDRSR 90


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 215,531
Number of Sequences: 438
Number of extensions: 5526
Number of successful extensions: 12
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21317625
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)