Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV13b17f
(607 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81113-3|CAB03280.1| 267|Caenorhabditis elegans Hypothetical pr... 225 2e-59
U21310-1|AAA62519.1| 997|Caenorhabditis elegans Hypothetical pr... 31 0.64
U41106-1|AAA82409.1| 347|Caenorhabditis elegans Hypothetical pr... 31 0.84
U39655-2|AAY86240.1| 152|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z69664-9|CAA93519.2| 1470|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z68880-10|CAA93100.2| 1470|Caenorhabditis elegans Hypothetical p... 29 3.4
U29244-2|AAC71086.1| 334|Caenorhabditis elegans Hypothetical pr... 29 3.4
AF308449-1|AAL09435.1| 1347|Caenorhabditis elegans PXF isoform C... 29 3.4
AF308447-1|AAL09433.1| 1470|Caenorhabditis elegans PXF isoform A... 29 3.4
AF170796-1|AAF22963.1| 1470|Caenorhabditis elegans RA-GEF protein. 29 3.4
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 29 3.4
Z93373-3|CAD54120.1| 449|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z83245-12|CAD54180.1| 449|Caenorhabditis elegans Hypothetical p... 28 5.9
Z80789-4|CAC35816.1| 350|Caenorhabditis elegans Hypothetical pr... 27 7.9
Z69788-9|CAC35811.1| 350|Caenorhabditis elegans Hypothetical pr... 27 7.9
Z69788-6|CAD44118.1| 324|Caenorhabditis elegans Hypothetical pr... 27 7.9
Z69788-5|CAD44117.1| 314|Caenorhabditis elegans Hypothetical pr... 27 7.9
Z69788-4|CAA93647.1| 341|Caenorhabditis elegans Hypothetical pr... 27 7.9
Z69788-3|CAA93648.1| 300|Caenorhabditis elegans Hypothetical pr... 27 7.9
U40427-5|AAP82652.1| 356|Caenorhabditis elegans Abnormal cell m... 27 7.9
U40427-4|AAA81470.2| 362|Caenorhabditis elegans Abnormal cell m... 27 7.9
U23515-4|AAU87816.1| 333|Caenorhabditis elegans Hypothetical pr... 27 7.9
AF150958-1|AAD43178.1| 362|Caenorhabditis elegans guidance prot... 27 7.9
AC093703-2|AAL77187.3| 473|Caenorhabditis elegans Hypothetical ... 27 7.9
>Z81113-3|CAB03280.1| 267|Caenorhabditis elegans Hypothetical
protein T03F6.3 protein.
Length = 267
Score = 225 bits (550), Expect = 2e-59
Identities = 105/181 (58%), Positives = 135/181 (74%)
Frame = +1
Query: 64 MRLIILEDASIVADWAARFVLQRITQFAPGPGRHFVXXXXXXXXXXXMYKRLIEFHKEGK 243
M+LII E+A VA++AAR+V+ +I + A G++ V MYK+LIEF+ G
Sbjct: 1 MKLIIEENADKVAEFAARYVVTKINE-ATENGKYLVLGLPTGSTPLGMYKKLIEFYNAGV 59
Query: 244 LSFKYVTTFNMDEYVGLPRDHPESYHYYMWNEFFKHIDIEPSNAHVLDGNASDLVLECQR 423
+SF+ V TFNMDEYV LPRDH ESYH +M++ FF+HIDI P+N H+LDGN SD EC+
Sbjct: 60 ISFEKVKTFNMDEYVDLPRDHTESYHSFMFDNFFRHIDINPANIHILDGNTSDHEKECEE 119
Query: 424 FEKLIQEAGGVHLFIGGIGPDGHIAFNEPGSSLVSRTRVKTLAYDTLDANKRFFDNDISK 603
+E+ I+E+GG+ LF+GGIGPDGHIAFNEPGSSL SRTR+KTL DT+ AN RFF DI+K
Sbjct: 120 YERKIKESGGIDLFVGGIGPDGHIAFNEPGSSLASRTRIKTLNEDTIQANARFFGGDITK 179
Query: 604 V 606
V
Sbjct: 180 V 180
>U21310-1|AAA62519.1| 997|Caenorhabditis elegans Hypothetical
protein F40H6.2 protein.
Length = 997
Score = 31.1 bits (67), Expect = 0.64
Identities = 13/38 (34%), Positives = 25/38 (65%)
Frame = +1
Query: 358 IEPSNAHVLDGNASDLVLECQRFEKLIQEAGGVHLFIG 471
IEP+N +L+GN+S ++ C ++++Q H++IG
Sbjct: 181 IEPTNVCLLNGNSS-VLSRCGEIDRMLQFFDDTHVYIG 217
>U41106-1|AAA82409.1| 347|Caenorhabditis elegans Hypothetical
protein W06A11.4 protein.
Length = 347
Score = 30.7 bits (66), Expect = 0.84
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Frame = -3
Query: 284 YSSMLKVVTYLKDNFPS---LWNSINRLYMPRGVPPVGRPSTKCLPGPGANCVIRWRTNL 114
+SS+L K+ PS + +IN P P+ + +K P P +N V R+R+ +
Sbjct: 209 HSSVLNPSGQYKNVLPSKKPVQQTINSA-QPAAPNPIAQYKSKMPPPPISNPVARYRSMI 267
Query: 113 AAQSATMLASSRIIRRI 63
+ Q T+L SS I ++
Sbjct: 268 SQQMPTILPSSAAIGQL 284
>U39655-2|AAY86240.1| 152|Caenorhabditis elegans Hypothetical
protein C46F4.3 protein.
Length = 152
Score = 30.3 bits (65), Expect = 1.1
Identities = 25/86 (29%), Positives = 36/86 (41%)
Frame = -3
Query: 284 YSSMLKVVTYLKDNFPSLWNSINRLYMPRGVPPVGRPSTKCLPGPGANCVIRWRTNLAAQ 105
Y S +K L D+ P +I P G V RPSTKC+ G C R N
Sbjct: 68 YDSKVKESESLHDDKPENLPAIGLAGHPCGQGGVCRPSTKCIEG---TCKCRQGYN--PS 122
Query: 104 SATMLASSRIIRRIVRDYRANSQDVL 27
+ + ++R I R + N + +L
Sbjct: 123 FGECIRNLNVLRHIPRAFIPNHRSIL 148
>Z69664-9|CAA93519.2| 1470|Caenorhabditis elegans Hypothetical protein
T14G10.2a protein.
Length = 1470
Score = 28.7 bits (61), Expect = 3.4
Identities = 18/45 (40%), Positives = 23/45 (51%)
Frame = -3
Query: 203 PRGVPPVGRPSTKCLPGPGANCVIRWRTNLAAQSATMLASSRIIR 69
PRG+PP RP+ LPG N R T + AT L S ++ R
Sbjct: 1430 PRGLPPKSRPT--ILPGSHTNSSSRMGT---IKEATFLTSEQVSR 1469
>Z68880-10|CAA93100.2| 1470|Caenorhabditis elegans Hypothetical
protein T14G10.2a protein.
Length = 1470
Score = 28.7 bits (61), Expect = 3.4
Identities = 18/45 (40%), Positives = 23/45 (51%)
Frame = -3
Query: 203 PRGVPPVGRPSTKCLPGPGANCVIRWRTNLAAQSATMLASSRIIR 69
PRG+PP RP+ LPG N R T + AT L S ++ R
Sbjct: 1430 PRGLPPKSRPT--ILPGSHTNSSSRMGT---IKEATFLTSEQVSR 1469
>U29244-2|AAC71086.1| 334|Caenorhabditis elegans Hypothetical
protein ZK1248.5 protein.
Length = 334
Score = 28.7 bits (61), Expect = 3.4
Identities = 24/96 (25%), Positives = 42/96 (43%), Gaps = 4/96 (4%)
Frame = +1
Query: 238 GKLSFKYVTTFNMDEYVGLPRDHPESYHYYMWNEFFKHIDI--EPSNAHVLDGNASDLV- 408
G S Y T MD+Y L + YY+ N F + I + + ++ NA D+
Sbjct: 133 GNNSMAYATKKTMDQYKNLTGSMDHLHKYYVSNYDFGDLCIPKDLDTSGIVVKNARDVPD 192
Query: 409 LECQRFEKLIQEAGGVHLFIGGIGPD-GHIAFNEPG 513
+ +++ + + +G I D G +A+NE G
Sbjct: 193 TDILKYDAKVFKYERSKYVLGQIREDFGRVAYNEKG 228
>AF308449-1|AAL09435.1| 1347|Caenorhabditis elegans PXF isoform C
protein.
Length = 1347
Score = 28.7 bits (61), Expect = 3.4
Identities = 18/45 (40%), Positives = 23/45 (51%)
Frame = -3
Query: 203 PRGVPPVGRPSTKCLPGPGANCVIRWRTNLAAQSATMLASSRIIR 69
PRG+PP RP+ LPG N R T + AT L S ++ R
Sbjct: 1307 PRGLPPKSRPT--ILPGSHTNSSSRMGT---IKEATFLTSEQVSR 1346
>AF308447-1|AAL09433.1| 1470|Caenorhabditis elegans PXF isoform A
protein.
Length = 1470
Score = 28.7 bits (61), Expect = 3.4
Identities = 18/45 (40%), Positives = 23/45 (51%)
Frame = -3
Query: 203 PRGVPPVGRPSTKCLPGPGANCVIRWRTNLAAQSATMLASSRIIR 69
PRG+PP RP+ LPG N R T + AT L S ++ R
Sbjct: 1430 PRGLPPKSRPT--ILPGSHTNSSSRMGT---IKEATFLTSEQVSR 1469
>AF170796-1|AAF22963.1| 1470|Caenorhabditis elegans RA-GEF protein.
Length = 1470
Score = 28.7 bits (61), Expect = 3.4
Identities = 18/45 (40%), Positives = 23/45 (51%)
Frame = -3
Query: 203 PRGVPPVGRPSTKCLPGPGANCVIRWRTNLAAQSATMLASSRIIR 69
PRG+PP RP+ LPG N R T + AT L S ++ R
Sbjct: 1430 PRGLPPKSRPT--ILPGSHTNSSSRMGT---IKEATFLTSEQVSR 1469
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 28.7 bits (61), Expect = 3.4
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = -1
Query: 592 RCQRTACWRPGCRRPGSSLASETPARSPVR*TRC 491
RC C RPGC R S S TP R P C
Sbjct: 89 RCSNQECPRPGCYR---SAGSSTPDRFPCERAGC 119
>Z93373-3|CAD54120.1| 449|Caenorhabditis elegans Hypothetical
protein ZK131.11b protein.
Length = 449
Score = 27.9 bits (59), Expect = 5.9
Identities = 14/63 (22%), Positives = 32/63 (50%), Gaps = 4/63 (6%)
Frame = +1
Query: 286 VGLPRDHPESYHYYMWNEFFKHI----DIEPSNAHVLDGNASDLVLECQRFEKLIQEAGG 453
+GLP ++ ++ E+ +++ DI+ N + G +S+ ++ K ++ GG
Sbjct: 112 LGLPNKMNQTNDFFSSTEYCQYVCSREDIDSFNGNSTGGKSSEQPIQAAFLRKSRKDGGG 171
Query: 454 VHL 462
+HL
Sbjct: 172 LHL 174
>Z83245-12|CAD54180.1| 449|Caenorhabditis elegans Hypothetical
protein ZK131.11b protein.
Length = 449
Score = 27.9 bits (59), Expect = 5.9
Identities = 14/63 (22%), Positives = 32/63 (50%), Gaps = 4/63 (6%)
Frame = +1
Query: 286 VGLPRDHPESYHYYMWNEFFKHI----DIEPSNAHVLDGNASDLVLECQRFEKLIQEAGG 453
+GLP ++ ++ E+ +++ DI+ N + G +S+ ++ K ++ GG
Sbjct: 112 LGLPNKMNQTNDFFSSTEYCQYVCSREDIDSFNGNSTGGKSSEQPIQAAFLRKSRKDGGG 171
Query: 454 VHL 462
+HL
Sbjct: 172 LHL 174
>Z80789-4|CAC35816.1| 350|Caenorhabditis elegans Hypothetical
protein F09A5.4c protein.
Length = 350
Score = 27.5 bits (58), Expect = 7.9
Identities = 11/28 (39%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = -1
Query: 232 CGTLSTVCTCRGASH-RWAGPARSVFPD 152
CGTLS VCT + H + G +++++ D
Sbjct: 159 CGTLSEVCTQQSCPHMSFPGTSKAIYTD 186
>Z69788-9|CAC35811.1| 350|Caenorhabditis elegans Hypothetical
protein F09A5.4c protein.
Length = 350
Score = 27.5 bits (58), Expect = 7.9
Identities = 11/28 (39%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = -1
Query: 232 CGTLSTVCTCRGASH-RWAGPARSVFPD 152
CGTLS VCT + H + G +++++ D
Sbjct: 159 CGTLSEVCTQQSCPHMSFPGTSKAIYTD 186
>Z69788-6|CAD44118.1| 324|Caenorhabditis elegans Hypothetical
protein F09A5.4e protein.
Length = 324
Score = 27.5 bits (58), Expect = 7.9
Identities = 11/28 (39%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = -1
Query: 232 CGTLSTVCTCRGASH-RWAGPARSVFPD 152
CGTLS VCT + H + G +++++ D
Sbjct: 133 CGTLSEVCTQQSCPHMSFPGTSKAIYTD 160
>Z69788-5|CAD44117.1| 314|Caenorhabditis elegans Hypothetical
protein F09A5.4d protein.
Length = 314
Score = 27.5 bits (58), Expect = 7.9
Identities = 11/28 (39%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = -1
Query: 232 CGTLSTVCTCRGASH-RWAGPARSVFPD 152
CGTLS VCT + H + G +++++ D
Sbjct: 123 CGTLSEVCTQQSCPHMSFPGTSKAIYTD 150
>Z69788-4|CAA93647.1| 341|Caenorhabditis elegans Hypothetical
protein F09A5.4b protein.
Length = 341
Score = 27.5 bits (58), Expect = 7.9
Identities = 11/28 (39%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = -1
Query: 232 CGTLSTVCTCRGASH-RWAGPARSVFPD 152
CGTLS VCT + H + G +++++ D
Sbjct: 150 CGTLSEVCTQQSCPHMSFPGTSKAIYTD 177
>Z69788-3|CAA93648.1| 300|Caenorhabditis elegans Hypothetical
protein F09A5.4a protein.
Length = 300
Score = 27.5 bits (58), Expect = 7.9
Identities = 11/28 (39%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = -1
Query: 232 CGTLSTVCTCRGASH-RWAGPARSVFPD 152
CGTLS VCT + H + G +++++ D
Sbjct: 109 CGTLSEVCTQQSCPHMSFPGTSKAIYTD 136
>U40427-5|AAP82652.1| 356|Caenorhabditis elegans Abnormal cell
migration protein13, isoform b protein.
Length = 356
Score = 27.5 bits (58), Expect = 7.9
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = -3
Query: 479 PIPPMNKCTPPASCMSFSKR*HSSTKSDALPSSTCALLGSMSM 351
P PP K PP++ S++ R H + +PS T A S M
Sbjct: 290 PSPP--KMPPPSAASSYTPRLHHHFEGPLVPSETSAFHSSNRM 330
>U40427-4|AAA81470.2| 362|Caenorhabditis elegans Abnormal cell
migration protein13, isoform a protein.
Length = 362
Score = 27.5 bits (58), Expect = 7.9
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = -3
Query: 479 PIPPMNKCTPPASCMSFSKR*HSSTKSDALPSSTCALLGSMSM 351
P PP K PP++ S++ R H + +PS T A S M
Sbjct: 296 PSPP--KMPPPSAASSYTPRLHHHFEGPLVPSETSAFHSSNRM 336
>U23515-4|AAU87816.1| 333|Caenorhabditis elegans Hypothetical
protein R144.12 protein.
Length = 333
Score = 27.5 bits (58), Expect = 7.9
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = -3
Query: 296 GRPTYSSMLKVVTYLKDNFPSLWNSINRLYMPRGV 192
G+ Y MLK ++D PSLWN I RG+
Sbjct: 270 GKEYYWKMLKRNRIMRDIKPSLWNQITATGDIRGI 304
>AF150958-1|AAD43178.1| 362|Caenorhabditis elegans guidance protein
MIG-13 protein.
Length = 362
Score = 27.5 bits (58), Expect = 7.9
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = -3
Query: 479 PIPPMNKCTPPASCMSFSKR*HSSTKSDALPSSTCALLGSMSM 351
P PP K PP++ S++ R H + +PS T A S M
Sbjct: 296 PSPP--KMPPPSAASSYTPRLHHHFEGPLVPSETSAFHSSNRM 336
>AC093703-2|AAL77187.3| 473|Caenorhabditis elegans Hypothetical
protein Y20F4.2 protein.
Length = 473
Score = 27.5 bits (58), Expect = 7.9
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +3
Query: 90 QHRCRLGRQIRSPADHAVRSGSG 158
QHR G + RSP DH + S SG
Sbjct: 100 QHRPIQGHRSRSPEDHMIGSASG 122
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,135,650
Number of Sequences: 27780
Number of extensions: 320158
Number of successful extensions: 1041
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 975
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1040
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1300523034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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