Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV13b16r
         (654 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...   112   3e-27
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    79   5e-17
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    49   3e-08
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       23   3.4  

>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score =  112 bits (269), Expect = 3e-27
 Identities = 58/153 (37%), Positives = 86/153 (56%)
 Frame = -1

Query: 651 IQNMVYLDMVVSELLRLWPPGVSMDRICVQDYNLGKPNDKAKRDFILRKGTGVAIPVWAF 472
           I+ M YLD V  E LR++PP   + R  + DY     ND       + K   + IP +A 
Sbjct: 350 IKEMEYLDKVFKETLRMYPPASILMRKAISDYTF---NDTK---ITIPKEMKIWIPAFAI 403

Query: 471 HRNPEFFPDPLKFDPERFSEENKHNIKPFAYLPFGVGPRNCIGSRFALCEVKVMAYQLLQ 292
           HR+   +P+P  FDPERF ++   +  P  YLPFG GPRNCIG+RFA+ + KV    +L+
Sbjct: 404 HRDSAIYPNPDSFDPERFDQDAMASRHPMHYLPFGDGPRNCIGARFAVYQTKVGLITILR 463

Query: 291 HMEISPCEKTCIPSKLSKETFNLRLEGGHWVRL 193
           + ++  CEKT IP +     F L  + G ++++
Sbjct: 464 NHKVEVCEKTIIPYEFDPGAFLLSPKDGIYLKI 496


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 78.6 bits (185), Expect = 5e-17
 Identities = 38/121 (31%), Positives = 65/121 (53%)
 Frame = -1

Query: 642 MVYLDMVVSELLRLWPPGVSMDRICVQDYNLGKPNDKAKRDFILRKGTGVAIPVWAFHRN 463
           M YL+  + E LR++PP   + R    D  L      A  D+ +  G  V I  +  HR 
Sbjct: 397 MKYLERCLLETLRMYPPVPLIAREIKTDLKL------ASGDYTIPAGCTVVIGTFKLHRQ 450

Query: 462 PEFFPDPLKFDPERFSEENKHNIKPFAYLPFGVGPRNCIGSRFALCEVKVMAYQLLQHME 283
           P  +P+P  FDP+ F  E   N   +A++PF  GPR+C+G ++A+ ++K++   +L++  
Sbjct: 451 PHIYPNPDVFDPDNFLPEKTANRHYYAFVPFSAGPRSCVGRKYAMLKLKIVLSTILRNFR 510

Query: 282 I 280
           +
Sbjct: 511 V 511


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 49.2 bits (112), Expect = 3e-08
 Identities = 35/125 (28%), Positives = 56/125 (44%)
 Frame = -1

Query: 654 SIQNMVYLDMVVSELLRLWPPGVSMDRICVQDYNLGKPNDKAKRDFILRKGTGVAIPVWA 475
           +++   YL   ++E LRL P    + RI  +   L          + L  GT V +  W 
Sbjct: 374 NLRKAKYLRACITESLRLIPTTTCIARILDEPIELS--------GYRLTAGTVVLLHTWI 425

Query: 474 FHRNPEFFPDPLKFDPERFSEENKHNIKPFAYLPFGVGPRNCIGSRFALCEVKVMAYQLL 295
              N E F D  K+ PER++     +  P    PFG G R C G RF    ++++  +++
Sbjct: 426 AGLNEENFKDAKKYLPERWTTPTTPH-SPLLVAPFGAGRRICPGKRFVDLALQLILAKII 484

Query: 294 QHMEI 280
           +  EI
Sbjct: 485 REFEI 489


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = -2

Query: 653 PYRIWCIWIWLFQNS 609
           PY +  +W W+ +NS
Sbjct: 275 PYYVMSLWYWIDRNS 289


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,096
Number of Sequences: 438
Number of extensions: 4282
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19804986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)