Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV13b09f
(617 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 125 6e-30
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 108 5e-25
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 98 1e-21
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 95 1e-20
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 87 2e-18
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 85 8e-18
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 78 9e-16
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 60 3e-10
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 30 0.23
SPAC1805.17 |crm1|caf2, SPAC1B2.01|nuclear export receptor Crm1|... 30 0.31
SPAC22H12.03 |||mitochondrial hydrolase|Schizosaccharomyces pomb... 28 1.2
SPCC10H11.01 |prp11||ATP-dependent RNA helicase Prp11|Schizosacc... 26 3.8
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 3.8
SPBC56F2.06 |mug147||sequence orphan|Schizosaccharomyces pombe|c... 26 5.0
SPCC18.17c |||sequence orphan|Schizosaccharomyces pombe|chr 3|||... 25 6.6
SPAC1A6.03c |||phospholipase |Schizosaccharomyces pombe|chr 1|||... 25 6.6
SPBC19C2.01 |cdc28|prp8|ATP-dependent RNA helicase Cdc28 |Schizo... 25 8.8
SPAC1805.16c |||purine nucleoside phosphorylase |Schizosaccharom... 25 8.8
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 125 bits (301), Expect = 6e-30
Identities = 65/180 (36%), Positives = 109/180 (60%), Gaps = 3/180 (1%)
Frame = +2
Query: 86 SVLCVVLLPILLSQQVDAAAVISIDFGSEWMKVGIVSPGVPMEIVLNKESKRKTPAVVAF 265
SVL ++L A++V++ID+G+EW K ++ PG+P+EIVL K+++RK + VAF
Sbjct: 4 SVLTIILFFSCQFWHAFASSVLAIDYGTEWTKAALIKPGIPLEIVLTKDTRRKEQSAVAF 63
Query: 266 RDDVRTFGEDAVTVGVRFPKNSYKYLLELLGKT-YDHPLVQLFRKRFPYYEIVESDRGT- 439
+ + R FG DA + RFP +S + + ELL + LVQ ++ +P ++VE++ T
Sbjct: 64 KGNERIFGVDASNLATRFPAHSIRNVKELLDTAGLESVLVQKYQSSYPAIQLVENEETTS 123
Query: 440 -IEFVHDDKTKFTPEELVAQILAKAKDFAEINHGQQISECVITVPGYFNQAERRALKEAA 616
I FV D+ ++ EE++A + AE ++I++ V+TVP +FN+ +R L EAA
Sbjct: 124 GISFVISDEENYSLEEIIAMTMEHYISLAEEMAHEKITDLVLTVPPHFNELQRSILLEAA 183
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 108 bits (260), Expect = 5e-25
Identities = 65/191 (34%), Positives = 103/191 (53%), Gaps = 6/191 (3%)
Frame = +2
Query: 59 KMTIFPKMYSVLCVVLLPILLSQQVDAAA-----VISIDFGSEWMKVGIVSPGVPMEIVL 223
K +F + + + LLP+ + D + VI ID G+ + V ++ G +EI+
Sbjct: 3 KFQLFSILSYFVALFLLPMAFASGDDNSTESYGTVIGIDLGTTYSCVAVMKNG-RVEIIA 61
Query: 224 NKESKRKTPAVVAFRDDVRTFGEDAVTVGVRFPKNSYKYLLELLGKTYDHPLVQLFRKRF 403
N + R TP+ VAF +D R GE A P+N+ + L+G+ +D + K F
Sbjct: 62 NDQGNRITPSYVAFTEDERLVGEAAKNQAPSNPENTIFDIKRLIGRKFDEKTMAKDIKSF 121
Query: 404 PYYEIVESDRGTIEF-VHDDKTKFTPEELVAQILAKAKDFAEINHGQQISECVITVPGYF 580
P++ + + +R +E V K KFTPEE+ A IL+K K AE G+ ++ V+TVP YF
Sbjct: 122 PFHIVNDKNRPLVEVNVGGKKKKFTPEEISAMILSKMKQTAEAYLGKPVTHAVVTVPAYF 181
Query: 581 NQAERRALKEA 613
N A+R+A K+A
Sbjct: 182 NDAQRQATKDA 192
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 97.9 bits (233), Expect = 1e-21
Identities = 54/156 (34%), Positives = 87/156 (55%), Gaps = 1/156 (0%)
Frame = +2
Query: 149 ISIDFGSEWMKVGIVSPGVPMEIVLNKESKRKTPAVVAFRDDVRTFGEDAVTVGVRFPKN 328
I ID G+ + VG S +EI+ N + R TP+ VAF D R G+ A P N
Sbjct: 5 IGIDLGTTYSCVGHFSNN-RVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHN 63
Query: 329 SYKYLLELLGKTYDHPLVQLFRKRFPYYEIVESDRGTIEFVHDDKTK-FTPEELVAQILA 505
+ L+G+ +D P VQ K +P+ I + + ++ + +TK FTPEE+ + +L
Sbjct: 64 TIFDAKRLIGRKFDDPEVQSDMKHWPFKVISKDGKPVLQVEYKGETKTFTPEEISSMVLM 123
Query: 506 KAKDFAEINHGQQISECVITVPGYFNQAERRALKEA 613
K ++ AE G ++++ V+TVP YFN ++R+A K+A
Sbjct: 124 KMRETAEAYLGGKVTDAVVTVPAYFNDSQRQATKDA 159
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 94.7 bits (225), Expect = 1e-20
Identities = 54/156 (34%), Positives = 86/156 (55%), Gaps = 1/156 (0%)
Frame = +2
Query: 149 ISIDFGSEWMKVGIVSPGVPMEIVLNKESKRKTPAVVAFRDDVRTFGEDAVTVGVRFPKN 328
I ID G+ + VG S +EI+ N + R TP+ VAF D R G+ A P N
Sbjct: 5 IGIDLGTTYSCVGHFSNN-RVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHN 63
Query: 329 SYKYLLELLGKTYDHPLVQLFRKRFPYYEIVESDRGTIEFVHDDKTK-FTPEELVAQILA 505
+ L+G+ ++ P VQ K +P+ I + + I+ +TK FTPEE+ + +L
Sbjct: 64 TIFDAKRLIGRRFNDPEVQSDMKHWPFKVIEKDGKPLIQVEFKGETKTFTPEEISSMVLL 123
Query: 506 KAKDFAEINHGQQISECVITVPGYFNQAERRALKEA 613
K ++ AE G ++++ V+TVP YFN ++R+A K+A
Sbjct: 124 KMRESAEAFLGGKVTDAVVTVPAYFNDSQRQATKDA 159
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 87.0 bits (206), Expect = 2e-18
Identities = 50/156 (32%), Positives = 83/156 (53%), Gaps = 1/156 (0%)
Frame = +2
Query: 149 ISIDFGSEWMKVGIVSPGVPMEIVLNKESKRKTPAVVAFRDDVRTFGEDAVTVGVRFPKN 328
I ID G+ + V + +EI+ N + R TP+ VAF + R G+ A P+N
Sbjct: 9 IGIDLGTTYSCVAVWETA-NVEIIPNDQGARTTPSFVAFTETERLVGDAAKNQAAMNPRN 67
Query: 329 SYKYLLELLGKTYDHPLVQLFRKRFPYYEIVESDRGTIEFVH-DDKTKFTPEELVAQILA 505
+ L+G+ Y+ P Q K +P+ I + TIE + +K +FT +E+ A +L
Sbjct: 68 TVFDAKRLIGRRYEDPETQKDIKHWPFKVIDNNGIPTIEVNYLGEKKQFTAQEISAMVLT 127
Query: 506 KAKDFAEINHGQQISECVITVPGYFNQAERRALKEA 613
K K+ +E +++ + VITVP YF+ ++R A K+A
Sbjct: 128 KMKEISEAKLNKRVEKAVITVPAYFSDSQRAATKDA 163
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 85.0 bits (201), Expect = 8e-18
Identities = 54/157 (34%), Positives = 82/157 (52%), Gaps = 1/157 (0%)
Frame = +2
Query: 146 VISIDFGSEWMKVGIVSPGVPMEIVLNKESKRKTPAVVAF-RDDVRTFGEDAVTVGVRFP 322
VI ID G+ + I+ P +++ N E R TP+VVAF +D R G A V P
Sbjct: 52 VIGIDLGTTTSCLAIMEGQTP-KVIANAEGTRTTPSVVAFTKDGERLVGVSAKRQAVINP 110
Query: 323 KNSYKYLLELLGKTYDHPLVQLFRKRFPYYEIVESDRGTIEFVHDDKTKFTPEELVAQIL 502
+N++ L+G+ + P VQ K PY +IVE G KT ++P ++ IL
Sbjct: 111 ENTFFATKRLIGRRFKEPEVQRDIKEVPY-KIVEHSNGDAWLEARGKT-YSPSQIGGFIL 168
Query: 503 AKAKDFAEINHGQQISECVITVPGYFNQAERRALKEA 613
+K ++ A G+ + V+TVP YFN ++R+A K A
Sbjct: 169 SKMRETASTYLGKDVKNAVVTVPAYFNDSQRQATKAA 205
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 78.2 bits (184), Expect = 9e-16
Identities = 47/160 (29%), Positives = 86/160 (53%), Gaps = 3/160 (1%)
Frame = +2
Query: 146 VISIDFGSEWMKVGIVSPGVPMEIVLNKESKRKTPAVVAFRDDVRTFGEDAVTVGVRFPK 325
V+ IDFG+ + V+ +++++N+ S R TP++V++ + R GE A + +
Sbjct: 7 VVGIDFGNSKTVIA-VARNRAIDVIVNEVSNRSTPSLVSYGERSRFLGEAAKSAEASNFR 65
Query: 326 NSYKYLLELLGKTYDHPLVQLFRKRFPYYEIVESD---RGTIEFVHDDKTKFTPEELVAQ 496
N+ L L G+TYD P ++ F ++ E D +++++++ T F+ +L+A
Sbjct: 66 NTVGSLKRLAGRTYDDPEIKDIESNFISAKLTEVDGFVGAKVQYLNEE-TAFSNIQLIAA 124
Query: 497 ILAKAKDFAEINHGQQISECVITVPGYFNQAERRALKEAA 616
K K AE +S+ VI++P +F +RRAL EAA
Sbjct: 125 YFTKIKAIAEAELIGSVSDVVISIPAWFTDIQRRALLEAA 164
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 59.7 bits (138), Expect = 3e-10
Identities = 46/174 (26%), Positives = 82/174 (47%), Gaps = 7/174 (4%)
Frame = +2
Query: 116 LLSQQVDAAAVISIDFGSEWMKVGIVSPGVPMEIVLNKESKRKTPAVVAFRDDVRTFGED 295
+++ + VI I FG++ + G +++ N+E R+ P+++++ D G
Sbjct: 16 IMADSEEYKTVIGISFGNQNSSIAFNRDG-KTDVLANEEGNRQIPSILSYHGDQEYHGVQ 74
Query: 296 AVTVGVRFPKNSYKYLLELLGKTYDHPLVQLFRKRFPYYEI-VESDRGTIEFVHDDKTK- 469
A VR NS +LLGK++D + L + + VE G V +D+
Sbjct: 75 ARGQLVRNADNSVTNFRDLLGKSHDE--LTLHHCHYSANPVNVEGQIGFKITVQEDEESD 132
Query: 470 -----FTPEELVAQILAKAKDFAEINHGQQISECVITVPGYFNQAERRALKEAA 616
T E + L + + AE G +++ CV++VP YF A+R+AL+ AA
Sbjct: 133 PKEKILTAHEASVRHLRRLTESAEDFLGTKVNGCVMSVPVYFTDAQRKALESAA 186
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 30.3 bits (65), Expect = 0.23
Identities = 31/113 (27%), Positives = 51/113 (45%), Gaps = 4/113 (3%)
Frame = -3
Query: 525 SAKSLALARICATSSSGVNFVLSSCTNSIVPRSDSTIS**GNLFLNNCTRGWSYVLPR-- 352
S S +LA TSSS + +S T S P S +T S + +N S
Sbjct: 143 SITSSSLASSSTTSSSLASSSTNS-TTSATPTSSATSSSLSSTAASNSATSSSLASSSLN 201
Query: 351 --SSSKYL*EFLGNLTPTVTASSPNVRTSSLKATTAGVFLLDSLFNTISIGTP 199
+S+ L + + +A+S ++ +SSL +TT+ S+ +T+S TP
Sbjct: 202 STTSATATSSSLSSTAASNSATSSSLASSSLNSTTSATATSSSISSTVSSSTP 254
>SPAC1805.17 |crm1|caf2, SPAC1B2.01|nuclear export receptor
Crm1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1078
Score = 29.9 bits (64), Expect = 0.31
Identities = 17/59 (28%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Frame = -1
Query: 170 LIQNQWKLLPPHRLVGLK---VSAITPHTTHYTFLEIWSSCINKLPSR--QVLQSSRPH 9
LI +WK+LP + +G++ V+ + +++ T L+ + +NKL Q+L+ PH
Sbjct: 74 LITTRWKMLPKEQRLGIRNYIVAVMIKNSSDETVLQQQKTFLNKLDLTLVQILKQEWPH 132
>SPAC22H12.03 |||mitochondrial hydrolase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 270
Score = 27.9 bits (59), Expect = 1.2
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +2
Query: 386 LFRKRFPYYEIVESDRGTIEFVHDDKTKFTPEELV 490
+F+K FP YE+V D G +VH +K K E ++
Sbjct: 233 VFKKFFPKYELVSLDCG--HWVHFEKPKEFSESII 265
>SPCC10H11.01 |prp11||ATP-dependent RNA helicase
Prp11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1014
Score = 26.2 bits (55), Expect = 3.8
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +2
Query: 209 MEIVLNKESKRKTPAVVAFRDDVRTFGEDAVTVGVRFPKNSYKYLLELLGKTYDHPL 379
ME + K K+ V R V + E V V R ++ + LLELLG+ Y++ L
Sbjct: 613 MEALARKVLKKPVEITVGGRSVVASEVEQIVEV--RPEESKFSRLLELLGELYNNQL 667
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 26.2 bits (55), Expect = 3.8
Identities = 31/138 (22%), Positives = 61/138 (44%)
Frame = -3
Query: 528 ISAKSLALARICATSSSGVNFVLSSCTNSIVPRSDSTIS**GNLFLNNCTRGWSYVLPRS 349
+S+ S + A +S+ +++ SS S+V S S S + ++ S S
Sbjct: 189 VSSTSSSTFSSAAPTSTSSSYLSSS---SVVSSSSSPSSSSSSTLTSSSLSTSSIPSTSS 245
Query: 348 SSKYL*EFLGNLTPTVTASSPNVRTSSLKATTAGVFLLDSLFNTISIGTPGDTMPTFIHS 169
SS L + + + TASS + +S + ++++ S +TIS + + PT S
Sbjct: 246 SSSSTSSSLSSSSSSSTASSSSSSSSIISSSSSSSSSPTSTSSTISSSSSSSSSPTSTSS 305
Query: 168 DPKSMEITAAASTCWLKS 115
S ++++ + L S
Sbjct: 306 TISSSSSSSSSFSSTLSS 323
>SPBC56F2.06 |mug147||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 411
Score = 25.8 bits (54), Expect = 5.0
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +2
Query: 356 GKTYDHPLVQLFRKRFPYYEIVESDRGTIEFVH 454
G TY+ P+ +L KR PY+ ES +I FV+
Sbjct: 170 GFTYEKPVTELPPKRPPYH--YESSSTSISFVN 200
>SPCC18.17c |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 488
Score = 25.4 bits (53), Expect = 6.6
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -1
Query: 191 LCQPSSILIQNQWKLLPPHRLVGLKVSAITP 99
L QP L W++LPP+ L L +A +P
Sbjct: 363 LLQPDHNLWMQLWRILPPNTLSTLVNTASSP 393
>SPAC1A6.03c |||phospholipase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 624
Score = 25.4 bits (53), Expect = 6.6
Identities = 31/111 (27%), Positives = 51/111 (45%), Gaps = 4/111 (3%)
Frame = -3
Query: 528 ISAKSLALARICATSSSGVNF-VLSSCT---NSIVPRSDSTIS**GNLFLNNCTRGWSYV 361
+S+ L A + AT ++ +F V +C S+ ++ ST S + F C G +
Sbjct: 521 LSSGILENAALSATQNNSDSFAVCLACAMIQRSLERKNMSTPSQCSSCFEQYCWNGTTVN 580
Query: 360 LPRSSSKYL*EFLGNLTPTVTASSPNVRTSSLKATTAGVFLLDSLFNTISI 208
P + S Y PTV ++S TSS++A +L SL T+S+
Sbjct: 581 NPSAVSNY--------APTVLSASTTSGTSSVRAKPIVFYLFASLL-TVSL 622
>SPBC19C2.01 |cdc28|prp8|ATP-dependent RNA helicase Cdc28
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1055
Score = 25.0 bits (52), Expect = 8.8
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +2
Query: 428 DRGTIEFVHDDKTKFTPEELVAQILA 505
+ T EFV D +KF+ EEL + LA
Sbjct: 197 EAATNEFVEDYSSKFSSEELALRKLA 222
>SPAC1805.16c |||purine nucleoside phosphorylase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 315
Score = 25.0 bits (52), Expect = 8.8
Identities = 14/28 (50%), Positives = 15/28 (53%)
Frame = +2
Query: 287 GEDAVTVGVRFPKNSYKYLLELLGKTYD 370
G +A GVRFP S Y LEL YD
Sbjct: 168 GPNAHEFGVRFPPLSDAYDLELRKLVYD 195
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,766,582
Number of Sequences: 5004
Number of extensions: 62038
Number of successful extensions: 191
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 181
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 183
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 271646730
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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