Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV13b09f
         (617 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY137766-1|AAM94344.1|   78|Anopheles gambiae heat shock protein...    31   0.022
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            25   2.6  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            25   2.6  
AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    24   3.4  
AY496421-1|AAS80138.1|  439|Anopheles gambiae bacteria responsiv...    23   7.9  

>AY137766-1|AAM94344.1|   78|Anopheles gambiae heat shock protein 70
           protein.
          Length = 78

 Score = 31.5 bits (68), Expect = 0.022
 Identities = 12/21 (57%), Positives = 17/21 (80%)
 Frame = +2

Query: 551 ECVITVPGYFNQAERRALKEA 613
           + VITVP YFN ++R+A K+A
Sbjct: 1   DAVITVPAYFNDSQRQATKDA 21


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 10/34 (29%), Positives = 20/34 (58%)
 Frame = +3

Query: 306  LESDSLKIPTNIYLNFLARHMTTLLYNYSERGSL 407
            ++++SL +P  + +   +RH     Y+Y+E G L
Sbjct: 2070 IDNNSLGLPKRVLIQPNSRHAYQRTYHYNEPGYL 2103


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 10/34 (29%), Positives = 20/34 (58%)
 Frame = +3

Query: 306  LESDSLKIPTNIYLNFLARHMTTLLYNYSERGSL 407
            ++++SL +P  + +   +RH     Y+Y+E G L
Sbjct: 2071 IDNNSLGLPKRVLIQPNSRHAYQRTYHYNEPGYL 2104


>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 21/93 (22%), Positives = 35/93 (37%), Gaps = 2/93 (2%)
 Frame = +2

Query: 200 GVPMEIVLN--KESKRKTPAVVAFRDDVRTFGEDAVTVGVRFPKNSYKYLLELLGKTYDH 373
           G+  E++ N  K S  K   +  +   +   G D +         +  ++L ++    D 
Sbjct: 180 GLREEVMTNVRKSSYTKPTPIQRYAIPIILNGRDLMACAQTGSGKTAAFMLPMIHHLLDK 239

Query: 374 PLVQLFRKRFPYYEIVESDRGTIEFVHDDKTKF 472
                 R R PY  IV   R     +HD+  KF
Sbjct: 240 EDSLELRTRNPYIVIVAPTRELAIQIHDEGRKF 272


>AY496421-1|AAS80138.1|  439|Anopheles gambiae bacteria responsive
           protein 2 protein.
          Length = 439

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 12/39 (30%), Positives = 21/39 (53%)
 Frame = +2

Query: 275 VRTFGEDAVTVGVRFPKNSYKYLLELLGKTYDHPLVQLF 391
           ++T+G D V +  +FP N  K +   LG  + H   ++F
Sbjct: 142 LKTYGFDGVDLEWQFPMNKPKKVRSTLGGVW-HGFKKVF 179


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 708,105
Number of Sequences: 2352
Number of extensions: 16147
Number of successful extensions: 33
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 60553008
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)