Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV13a10f
(599 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC019263-1|AAH19263.1| 342|Homo sapiens galactose mutarotase (a... 132 1e-30
BC014916-1|AAH14916.1| 342|Homo sapiens galactose mutarotase (a... 132 1e-30
AY064385-1|AAL62476.1| 342|Homo sapiens BLOCK 25 protein. 132 1e-30
AY064382-1|AAL62475.1| 221|Homo sapiens BLOCK 25 protein. 132 1e-30
AC074366-1|AAX93101.1| 342|Homo sapiens unknown protein. 132 1e-30
U11036-1|AAA67652.1| 204|Homo sapiens Ibd1 protein. 110 4e-24
BC030221-1|AAH30221.1| 1075|Homo sapiens ABI gene family, member... 29 9.4
AK025204-1|BAB15083.1| 371|Homo sapiens protein ( Homo sapiens ... 29 9.4
>BC019263-1|AAH19263.1| 342|Homo sapiens galactose mutarotase
(aldose 1-epimerase) protein.
Length = 342
Score = 132 bits (318), Expect = 1e-30
Identities = 67/137 (48%), Positives = 85/137 (62%)
Frame = +2
Query: 140 GETVSKFTWRASDGFSVSVISYGATIQSIQVPDKYGITSDVVLGFDELDGYVNRNTPYLG 319
G TV KF + SD V +IS+G TI +++V D+ G SDVVLGF EL+GY+ + PY G
Sbjct: 16 GGTVEKFQLQ-SDLLRVDIISWGCTITALEVKDRQGRASDVVLGFAELEGYLQKQ-PYFG 73
Query: 320 TTVGRCANRIGGAKFSIDGTTYQLANNIGKDHLHGGINGFNKANWNSTVDGTKVIFSYLS 499
+GR ANRI F +DG Y LA N + LHGG+ GF+K W V V FS +S
Sbjct: 74 AVIGRVANRIAKGTFKVDGKEYHLAINKEPNSLHGGVRGFDKVLWTPRVLSNGVQFSRIS 133
Query: 500 KDGEEGYPGDLITNITY 550
DGEEGYPG+L +TY
Sbjct: 134 PDGEEGYPGELKVWVTY 150
>BC014916-1|AAH14916.1| 342|Homo sapiens galactose mutarotase
(aldose 1-epimerase) protein.
Length = 342
Score = 132 bits (318), Expect = 1e-30
Identities = 67/137 (48%), Positives = 85/137 (62%)
Frame = +2
Query: 140 GETVSKFTWRASDGFSVSVISYGATIQSIQVPDKYGITSDVVLGFDELDGYVNRNTPYLG 319
G TV KF + SD V +IS+G TI +++V D+ G SDVVLGF EL+GY+ + PY G
Sbjct: 16 GGTVEKFQLQ-SDLLRVDIISWGCTITALEVKDRQGRASDVVLGFAELEGYLQKQ-PYFG 73
Query: 320 TTVGRCANRIGGAKFSIDGTTYQLANNIGKDHLHGGINGFNKANWNSTVDGTKVIFSYLS 499
+GR ANRI F +DG Y LA N + LHGG+ GF+K W V V FS +S
Sbjct: 74 AVIGRVANRIAKGTFKVDGKEYHLAINKEPNSLHGGVRGFDKVLWTPRVLSNGVQFSRIS 133
Query: 500 KDGEEGYPGDLITNITY 550
DGEEGYPG+L +TY
Sbjct: 134 PDGEEGYPGELKVWVTY 150
>AY064385-1|AAL62476.1| 342|Homo sapiens BLOCK 25 protein.
Length = 342
Score = 132 bits (318), Expect = 1e-30
Identities = 67/137 (48%), Positives = 85/137 (62%)
Frame = +2
Query: 140 GETVSKFTWRASDGFSVSVISYGATIQSIQVPDKYGITSDVVLGFDELDGYVNRNTPYLG 319
G TV KF + SD V +IS+G TI +++V D+ G SDVVLGF EL+GY+ + PY G
Sbjct: 16 GGTVEKFQLQ-SDLLRVDIISWGCTITALEVKDRQGRASDVVLGFAELEGYLQKQ-PYFG 73
Query: 320 TTVGRCANRIGGAKFSIDGTTYQLANNIGKDHLHGGINGFNKANWNSTVDGTKVIFSYLS 499
+GR ANRI F +DG Y LA N + LHGG+ GF+K W V V FS +S
Sbjct: 74 AVIGRVANRIAKGTFKVDGKEYHLAINKEPNSLHGGVRGFDKVLWTPRVLSNGVQFSRIS 133
Query: 500 KDGEEGYPGDLITNITY 550
DGEEGYPG+L +TY
Sbjct: 134 PDGEEGYPGELKVWVTY 150
>AY064382-1|AAL62475.1| 221|Homo sapiens BLOCK 25 protein.
Length = 221
Score = 132 bits (318), Expect = 1e-30
Identities = 67/137 (48%), Positives = 85/137 (62%)
Frame = +2
Query: 140 GETVSKFTWRASDGFSVSVISYGATIQSIQVPDKYGITSDVVLGFDELDGYVNRNTPYLG 319
G TV KF + SD V +IS+G TI +++V D+ G SDVVLGF EL+GY+ + PY G
Sbjct: 16 GGTVEKFQLQ-SDLLRVDIISWGCTITALEVKDRQGRASDVVLGFAELEGYLQKQ-PYFG 73
Query: 320 TTVGRCANRIGGAKFSIDGTTYQLANNIGKDHLHGGINGFNKANWNSTVDGTKVIFSYLS 499
+GR ANRI F +DG Y LA N + LHGG+ GF+K W V V FS +S
Sbjct: 74 AVIGRVANRIAKGTFKVDGKEYHLAINKEPNSLHGGVRGFDKVLWTPRVLSNGVQFSRIS 133
Query: 500 KDGEEGYPGDLITNITY 550
DGEEGYPG+L +TY
Sbjct: 134 PDGEEGYPGELKVWVTY 150
>AC074366-1|AAX93101.1| 342|Homo sapiens unknown protein.
Length = 342
Score = 132 bits (318), Expect = 1e-30
Identities = 67/137 (48%), Positives = 85/137 (62%)
Frame = +2
Query: 140 GETVSKFTWRASDGFSVSVISYGATIQSIQVPDKYGITSDVVLGFDELDGYVNRNTPYLG 319
G TV KF + SD V +IS+G TI +++V D+ G SDVVLGF EL+GY+ + PY G
Sbjct: 16 GGTVEKFQLQ-SDLLRVDIISWGCTITALEVKDRQGRASDVVLGFAELEGYLQKQ-PYFG 73
Query: 320 TTVGRCANRIGGAKFSIDGTTYQLANNIGKDHLHGGINGFNKANWNSTVDGTKVIFSYLS 499
+GR ANRI F +DG Y LA N + LHGG+ GF+K W V V FS +S
Sbjct: 74 AVIGRVANRIAKGTFKVDGKEYHLAINKEPNSLHGGVRGFDKVLWTPRVLSNGVQFSRIS 133
Query: 500 KDGEEGYPGDLITNITY 550
DGEEGYPG+L +TY
Sbjct: 134 PDGEEGYPGELKVWVTY 150
>U11036-1|AAA67652.1| 204|Homo sapiens Ibd1 protein.
Length = 204
Score = 110 bits (264), Expect = 4e-24
Identities = 65/148 (43%), Positives = 85/148 (57%), Gaps = 2/148 (1%)
Frame = +2
Query: 140 GETVSKFTWRASDGFSVSVISYGATIQSIQVPDKYGITSDVVLGFDELDGYVNRNTPYLG 319
G TV KF + SD V +IS+G TI +++V D+ G SDVVLGF EL+GY+ + PY G
Sbjct: 33 GGTVEKFQLQ-SDLLRVDIISWGCTITALEVKDRQGRASDVVLGFAELEGYLQKQ-PYFG 90
Query: 320 TTVGRCANRIGGAKFSIDGTTYQLANNIGKDHLHG-GINGFNKANWNSTVDGTKVI-FSY 493
+GR ANRI F +DG Y LA G GF+K W T+ K + FS
Sbjct: 91 AVIGRVANRIAKGTFKVDGKEYHLAITRNPTVCTGRSQQGFDKVLW--TLGAVKCVQFSR 148
Query: 494 LSKDGEEGYPGDLITNITYEVTEDNALH 577
+S DGEEGYPG+L +TY + + LH
Sbjct: 149 ISPDGEEGYPGELKVWVTYTL-DGGELH 175
>BC030221-1|AAH30221.1| 1075|Homo sapiens ABI gene family, member 3
(NESH) binding protein protein.
Length = 1075
Score = 29.5 bits (63), Expect = 9.4
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Frame = -1
Query: 323 WSLSTVCFCSR--TRRVRQSPEQRHW*FRICPVPELTV 216
W+L + C R T R R+ +++ W F+ICP E V
Sbjct: 151 WTLPSHCPNDRFYTIRYREKDKEKKWIFQICPATETIV 188
>AK025204-1|BAB15083.1| 371|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21551 fis, clone COL06266. ).
Length = 371
Score = 29.5 bits (63), Expect = 9.4
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Frame = -1
Query: 323 WSLSTVCFCSR--TRRVRQSPEQRHW*FRICPVPELTV 216
W+L + C R T R R+ +++ W F+ICP E V
Sbjct: 144 WTLPSHCPNDRFYTIRYREKDKEKKWIFQICPATETIV 181
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,701,563
Number of Sequences: 237096
Number of extensions: 2008097
Number of successful extensions: 7278
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 7208
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7271
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6297951520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -