Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV13a07f
(613 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precur... 43 3e-06
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 4.1
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 21 7.2
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 21 7.2
AF388659-3|AAK71993.1| 548|Apis mellifera 1D-myo-inositol-trisp... 21 7.2
AF388659-2|AAK71994.1| 463|Apis mellifera 1D-myo-inositol-trisp... 21 7.2
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 21 7.2
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 21 7.2
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 21 9.5
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 21 9.5
>AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precursor
protein.
Length = 405
Score = 42.7 bits (96), Expect = 3e-06
Identities = 39/146 (26%), Positives = 64/146 (43%), Gaps = 8/146 (5%)
Frame = +3
Query: 195 ARIVGGSVAGLGTHPHLAAMVITLTDGRTSMCGASLLSHTRSVTAAHC---WRTRSAQGR 365
+RIVGG+ G+ P +A + T G +CGA+++S +TAAHC T
Sbjct: 159 SRIVGGTNTGINEFPMMAGIKRTYEPGM--ICGATIISKRYVLTAAHCIIDENTTKLAIV 216
Query: 366 XXXXXXXXXXXXXXXXRINTNNVQMHGSYNM----DNLHNDVAMI-IHGRVGYTNVIQPI 530
+ N V +H Y++ D ND+A++ + + + + P
Sbjct: 217 VGEHDWSSKTETNATVLHSINKVIIHPKYDIIEKDDWQINDIALLKTEKDIKFGDKVGPA 276
Query: 531 FLPPSHLLNNQFVGTWAWAAGYGRTS 608
LP H L++ F G+ G+G TS
Sbjct: 277 CLPFQHFLDS-FAGSDVTVLGWGHTS 301
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 22.2 bits (45), Expect = 4.1
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +2
Query: 521 PADLPAPLTSPQQPIRG 571
P P+P SPQ P RG
Sbjct: 21 PGPQPSPHQSPQAPQRG 37
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 21.4 bits (43), Expect = 7.2
Identities = 8/17 (47%), Positives = 9/17 (52%)
Frame = -3
Query: 350 PGPPAVSRGHGASVAQQ 300
PGPP V HG +Q
Sbjct: 332 PGPPGVPGDHGDHAPKQ 348
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 21.4 bits (43), Expect = 7.2
Identities = 8/17 (47%), Positives = 9/17 (52%)
Frame = -3
Query: 350 PGPPAVSRGHGASVAQQ 300
PGPP V HG +Q
Sbjct: 332 PGPPGVPGDHGDHAPKQ 348
>AF388659-3|AAK71993.1| 548|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
Length = 548
Score = 21.4 bits (43), Expect = 7.2
Identities = 8/28 (28%), Positives = 17/28 (60%)
Frame = -3
Query: 434 NIVSVNSESTSEELSGAETQLKRASLSA 351
N+ NSE T ++ +++ +KR +S+
Sbjct: 301 NVEETNSEETHQKDGSSDSVIKRTVVSS 328
>AF388659-2|AAK71994.1| 463|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
Length = 463
Score = 21.4 bits (43), Expect = 7.2
Identities = 8/28 (28%), Positives = 17/28 (60%)
Frame = -3
Query: 434 NIVSVNSESTSEELSGAETQLKRASLSA 351
N+ NSE T ++ +++ +KR +S+
Sbjct: 216 NVEETNSEETHQKDGSSDSVIKRTVVSS 243
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 21.4 bits (43), Expect = 7.2
Identities = 8/28 (28%), Positives = 17/28 (60%)
Frame = -3
Query: 434 NIVSVNSESTSEELSGAETQLKRASLSA 351
N+ NSE T ++ +++ +KR +S+
Sbjct: 535 NVEETNSEETHQKDGSSDSVIKRTVVSS 562
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 21.4 bits (43), Expect = 7.2
Identities = 8/17 (47%), Positives = 9/17 (52%)
Frame = -3
Query: 350 PGPPAVSRGHGASVAQQ 300
PGPP V HG +Q
Sbjct: 271 PGPPGVPGDHGDHAPKQ 287
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 21.0 bits (42), Expect = 9.5
Identities = 13/45 (28%), Positives = 17/45 (37%)
Frame = -3
Query: 356 SAPGPPAVSRGHGASVAQQGGSAHGGATVGQSNHHSGKMWMSA*P 222
S PGP + GHG S H + HS + S+ P
Sbjct: 410 STPGPHHHTMGHGHSHIHATPHHHHSHAATPHHQHSTPLAHSSYP 454
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 21.0 bits (42), Expect = 9.5
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -3
Query: 320 GASVAQQGGSAHGGATVGQSNHH 252
G+S Q G+ G T+G +HH
Sbjct: 331 GSSPHHQHGNHTMGPTMGPPHHH 353
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,028
Number of Sequences: 438
Number of extensions: 3062
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18093444
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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