Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV13a06f
         (597 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC025726-1|AAH25726.1|  332|Homo sapiens potassium channel, subf...    30   5.4  
AY358853-1|AAQ89212.1|  332|Homo sapiens TASK-4 protein.               30   5.4  
AL136087-4|CAI19536.1|  332|Homo sapiens potassium channel, subf...    30   5.4  
AF358910-1|AAK49533.1|  332|Homo sapiens 2P domain potassium cha...    30   5.4  

>BC025726-1|AAH25726.1|  332|Homo sapiens potassium channel,
           subfamily K, member 17 protein.
          Length = 332

 Score = 30.3 bits (65), Expect = 5.4
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = -2

Query: 251 SQLPPPAKVFSCCHFSRSKSTKSSAKMSCPE 159
           SQL  P +V SCCH S  +  KS +    P+
Sbjct: 265 SQLETPGRVCSCCHHSSKEDFKSQSWRQGPD 295


>AY358853-1|AAQ89212.1|  332|Homo sapiens TASK-4 protein.
          Length = 332

 Score = 30.3 bits (65), Expect = 5.4
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = -2

Query: 251 SQLPPPAKVFSCCHFSRSKSTKSSAKMSCPE 159
           SQL  P +V SCCH S  +  KS +    P+
Sbjct: 265 SQLETPGRVCSCCHHSSKEDFKSQSWRQGPD 295


>AL136087-4|CAI19536.1|  332|Homo sapiens potassium channel,
           subfamily K, member 17 protein.
          Length = 332

 Score = 30.3 bits (65), Expect = 5.4
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = -2

Query: 251 SQLPPPAKVFSCCHFSRSKSTKSSAKMSCPE 159
           SQL  P +V SCCH S  +  KS +    P+
Sbjct: 265 SQLETPGRVCSCCHHSSKEDFKSQSWRQGPD 295


>AF358910-1|AAK49533.1|  332|Homo sapiens 2P domain potassium
           channel Talk-2 protein.
          Length = 332

 Score = 30.3 bits (65), Expect = 5.4
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = -2

Query: 251 SQLPPPAKVFSCCHFSRSKSTKSSAKMSCPE 159
           SQL  P +V SCCH S  +  KS +    P+
Sbjct: 265 SQLETPGRVCSCCHHSSKEDFKSQSWRQGPD 295


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,073,239
Number of Sequences: 237096
Number of extensions: 2025951
Number of successful extensions: 3350
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3266
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3350
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6324506272
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)