Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12p10f
         (528 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    24   0.84 
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    23   1.5  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    23   1.9  
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    23   2.6  
DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex det...    23   2.6  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    22   4.5  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    21   5.9  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    21   5.9  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    21   5.9  

>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 24.2 bits (50), Expect = 0.84
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = +3

Query: 366 RTLCCRVRMLQQRRW 410
           +T+CC+ R++ +R W
Sbjct: 341 QTICCKTRIIGRRSW 355


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -1

Query: 432 PNFICAATIVVVVTCEHDSIMFVVDV 355
           P F+C   I + VTC   SI  +V +
Sbjct: 255 PGFVCDFYIAMDVTCSTSSIFNLVAI 280


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = +3

Query: 429 LEIDAHATSEGHGRRETRPGYSELQSTR 512
           +++D  A     G +E   GY+   STR
Sbjct: 80  IKLDTRAEDSTRGEQEANLGYTNKMSTR 107


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -3

Query: 322 YRSPVKDHRLYCCRLDQESEPQ 257
           Y SP+  H LY    +Q S PQ
Sbjct: 269 YYSPLLSHGLYYVDTEQFSNPQ 290


>DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex
           determiner protein.
          Length = 191

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 7/23 (30%), Positives = 14/23 (60%)
 Frame = +1

Query: 319 YNDNKTETYSFLDINYEHYAVVF 387
           YN+N    Y++ + NY +Y  ++
Sbjct: 96  YNNNNYNNYNYNNNNYNNYKKLY 118


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 17/33 (51%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
 Frame = -2

Query: 125 HVPSMSFQFNSLGVTTGHVSFLTT--ASKNCRL 33
           +VP  S Q  SL  TTG+VS+LTT   S N +L
Sbjct: 708 NVPKESTQ--SL-TTTGNVSYLTTNNTSNNSQL 737


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = -3

Query: 487 PGLVSRRPCPSDVAC 443
           PG + ++ CP + AC
Sbjct: 258 PGTILKKLCPQEEAC 272


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = -3

Query: 487 PGLVSRRPCPSDVAC 443
           PG + ++ CP + AC
Sbjct: 173 PGTILKKLCPQEEAC 187


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = -3

Query: 487 PGLVSRRPCPSDVAC 443
           PG + ++ CP + AC
Sbjct: 492 PGTILKKLCPQEEAC 506


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,999
Number of Sequences: 438
Number of extensions: 3629
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14845611
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)