Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12p09f
(566 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_03_0154 + 13269335-13269463,13269597-13269728,13270704-13271024 169 2e-42
12_02_0764 - 22973675-22973995,22975626-22975757,22977074-22977202 167 4e-42
01_01_1068 - 8413269-8413589,8414011-8414262,8417472-8417603,841... 146 1e-35
06_01_0853 + 6486027-6486158,6486561-6486692,6486974-6486978,648... 132 1e-31
06_01_0098 + 818374-818427,818537-818627,818753-818868,818962-81... 77 1e-14
07_01_0842 + 6840943-6841288,6841800-6841970,6842762-6842832,684... 75 4e-14
05_05_0295 - 23912502-23912507,23912631-23912712,23913020-239131... 75 4e-14
03_06_0420 + 33794045-33794192,33794831-33794901,33795093-337952... 75 4e-14
01_06_1108 + 34574299-34574446,34575000-34575070,34575246-345753... 75 4e-14
01_01_1138 - 9019049-9019159,9019525-9019606,9020059-9020177,902... 75 4e-14
10_08_1062 + 22626262-22626318,22626404-22626494,22626601-226267... 74 9e-14
02_05_0413 + 28773869-28773925,28774045-28774135,28774515-287746... 72 3e-13
02_01_0226 + 1476529-1476585,1477207-1477297,1478247-1478362,147... 68 6e-12
08_01_0921 + 9075409-9075511,9075606-9075689,9075744-9075806,907... 64 7e-11
03_02_0046 - 5255513-5255630,5255715-5255876,5256579-5256733,525... 62 4e-10
07_01_0844 + 6855195-6855342,6855752-6855802,6856460-6856530,685... 60 2e-09
02_02_0711 - 13180406-13180423,13180483-13180563,13181026-131811... 60 2e-09
03_03_0224 + 15580944-15581036,15581630-15581770,15582385-155824... 50 2e-06
02_05_0639 - 30552148-30552265,30552362-30552523,30553177-305532... 48 4e-06
07_03_1298 - 25592788-25592890,25593126-25593229,25593747-255938... 46 3e-05
11_06_0218 + 21361975-21362314,21362463-21362545,21363870-213639... 39 0.002
05_03_0561 - 15476484-15476649,15476814-15476893,15476971-154770... 30 1.5
08_02_1311 - 26039741-26039930,26040185-26040316,26040528-260406... 29 2.0
02_05_0161 + 26384079-26384086,26386173-26386226,26386376-263864... 29 2.0
01_05_0340 - 21139885-21139978,21140169-21140272,21140379-211405... 29 2.0
01_01_0565 - 4159946-4160042,4160140-4160243,4160378-4160533,416... 29 2.0
07_03_0629 - 20076676-20080390,20080508-20080576,20081335-20081660 29 2.6
12_01_0028 + 242016-242467,242547-242918,243027-243182,245007-24... 29 3.4
11_01_0029 + 226459-226973,227053-227424,227533-227688,229513-22... 29 3.4
07_03_1521 + 27419859-27420106,27422050-27423363,27423885-274243... 29 3.4
07_03_0064 + 12995669-12995904,12996299-12996533,12998223-129983... 29 3.4
02_05_1134 - 34352154-34352375,34353683-34353746,34353820-343548... 29 3.4
01_01_0134 - 1224084-1224269,1224578-1224662,1224763-1225050,122... 29 3.4
09_02_0556 + 10637362-10637575,10637728-10637825 28 4.5
05_07_0205 - 28402436-28402505,28402604-28402681,28402789-284029... 28 4.5
01_05_0673 + 24183512-24183514,24183625-24183694,24184203-241842... 27 7.9
>01_03_0154 + 13269335-13269463,13269597-13269728,13270704-13271024
Length = 193
Score = 169 bits (410), Expect = 2e-42
Identities = 75/105 (71%), Positives = 86/105 (81%)
Frame = +3
Query: 252 MFILDWFTGVLGFLGLWKKSGKLLFLGLDNAGKTTLLHMLKDDRLAQHVPTLHPTSEELS 431
MF+ DWF GVL LGLW+K K+LFLGLDNAGKTTLLHMLKD+RL QH PT HPTSEELS
Sbjct: 1 MFLWDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS 60
Query: 432 IGSMRFTTFDLGGHQQARRVWRDYFPAVDAIVFLVDACDRPRLPE 566
IG ++F FDLGGHQ ARRVW+DY+ VDA+V+LVDA D+ R E
Sbjct: 61 IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFAE 105
>12_02_0764 - 22973675-22973995,22975626-22975757,22977074-22977202
Length = 193
Score = 167 bits (407), Expect = 4e-42
Identities = 74/105 (70%), Positives = 87/105 (82%)
Frame = +3
Query: 252 MFILDWFTGVLGFLGLWKKSGKLLFLGLDNAGKTTLLHMLKDDRLAQHVPTLHPTSEELS 431
MF++DWF GVL LGLW+K K+LFLGLDNAGKTTLLHMLKD+RL QH PT +PTSEELS
Sbjct: 1 MFLVDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS 60
Query: 432 IGSMRFTTFDLGGHQQARRVWRDYFPAVDAIVFLVDACDRPRLPE 566
IG ++F FDLGGHQ ARRVW+DY+ VDA+V+LVDA D+ R E
Sbjct: 61 IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFSE 105
>01_01_1068 -
8413269-8413589,8414011-8414262,8417472-8417603,
8417684-8417812
Length = 277
Score = 146 bits (353), Expect = 1e-35
Identities = 63/85 (74%), Positives = 73/85 (85%)
Frame = +3
Query: 252 MFILDWFTGVLGFLGLWKKSGKLLFLGLDNAGKTTLLHMLKDDRLAQHVPTLHPTSEELS 431
MF++DWF GVL LGLW+K K+LFLGLDNAGKTTLLHMLKD+RL QH PT +PTSEELS
Sbjct: 1 MFLVDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS 60
Query: 432 IGSMRFTTFDLGGHQQARRVWRDYF 506
IG ++F FDLGGHQ ARRVW+DY+
Sbjct: 61 IGKIKFKAFDLGGHQIARRVWKDYY 85
Score = 28.7 bits (61), Expect = 3.4
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +3
Query: 492 WRDYFPAVDAIVFLVDACDRPRLPE 566
W+ VDA+V+LVDA D+ R E
Sbjct: 165 WQCSHGLVDAVVYLVDAADKERFAE 189
>06_01_0853 +
6486027-6486158,6486561-6486692,6486974-6486978,
6487948-6488017,6489456-6489776
Length = 219
Score = 132 bits (320), Expect = 1e-31
Identities = 58/84 (69%), Positives = 67/84 (79%)
Frame = +3
Query: 255 FILDWFTGVLGFLGLWKKSGKLLFLGLDNAGKTTLLHMLKDDRLAQHVPTLHPTSEELSI 434
F+LDWF VL +GLW+K K+LFLGLDNAGKTTL +ML + LA H PT HPTSEELSI
Sbjct: 3 FLLDWFYDVLASIGLWQKEAKILFLGLDNAGKTTLFYMLSQENLAVHQPTQHPTSEELSI 62
Query: 435 GSMRFTTFDLGGHQQARRVWRDYF 506
G +RF FDLGGH+ ARRVWRDY+
Sbjct: 63 GRIRFKAFDLGGHRIARRVWRDYY 86
>06_01_0098 +
818374-818427,818537-818627,818753-818868,818962-819087,
819175-819357
Length = 189
Score = 76.6 bits (180), Expect = 1e-14
Identities = 34/85 (40%), Positives = 54/85 (63%)
Frame = +3
Query: 306 KSGKLLFLGLDNAGKTTLLHMLKDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGGHQQAR 485
K K+L LGLD AGKTT+L+ L + +PT+ E++ ++ FT +D+GG + R
Sbjct: 15 KEMKVLMLGLDAAGKTTILYRLHIGEVLSSIPTIGFNVEKVEYKNVAFTVWDVGGQDKLR 74
Query: 486 RVWRDYFPAVDAIVFLVDACDRPRL 560
+WR YF DA++++VD+ DR R+
Sbjct: 75 PLWRQYFRNADALIYVVDSMDRERI 99
>07_01_0842 +
6840943-6841288,6841800-6841970,6842762-6842832,
6843068-6843187,6843654-6843772,6844045-6844126,
6844254-6844259
Length = 304
Score = 74.9 bits (176), Expect = 4e-14
Identities = 34/88 (38%), Positives = 54/88 (61%)
Frame = +3
Query: 303 KKSGKLLFLGLDNAGKTTLLHMLKDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGGHQQA 482
KK ++L +GLD AGKTT+L+ LK + +PT+ E + ++ FT +D+GG +
Sbjct: 138 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKI 197
Query: 483 RRVWRDYFPAVDAIVFLVDACDRPRLPE 566
R +WR YF ++F+VD+ DR R+ E
Sbjct: 198 RPLWRHYFQNTQGLIFVVDSNDRDRVVE 225
>05_05_0295 -
23912502-23912507,23912631-23912712,23913020-23913138,
23913480-23913599,23913927-23913997,23914525-23914672
Length = 181
Score = 74.9 bits (176), Expect = 4e-14
Identities = 34/88 (38%), Positives = 54/88 (61%)
Frame = +3
Query: 303 KKSGKLLFLGLDNAGKTTLLHMLKDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGGHQQA 482
KK ++L +GLD AGKTT+L+ LK + +PT+ E + ++ FT +D+GG +
Sbjct: 15 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKI 74
Query: 483 RRVWRDYFPAVDAIVFLVDACDRPRLPE 566
R +WR YF ++F+VD+ DR R+ E
Sbjct: 75 RPLWRHYFQNTQGLIFVVDSNDRERVVE 102
>03_06_0420 +
33794045-33794192,33794831-33794901,33795093-33795212,
33795466-33795584,33795775-33795856,33795984-33795989
Length = 181
Score = 74.9 bits (176), Expect = 4e-14
Identities = 34/88 (38%), Positives = 54/88 (61%)
Frame = +3
Query: 303 KKSGKLLFLGLDNAGKTTLLHMLKDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGGHQQA 482
KK ++L +GLD AGKTT+L+ LK + +PT+ E + ++ FT +D+GG +
Sbjct: 15 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKI 74
Query: 483 RRVWRDYFPAVDAIVFLVDACDRPRLPE 566
R +WR YF ++F+VD+ DR R+ E
Sbjct: 75 RPLWRHYFQNTQGLIFVVDSNDRDRVVE 102
>01_06_1108 +
34574299-34574446,34575000-34575070,34575246-34575365,
34575471-34575488,34575708-34575826,34576244-34576325,
34576537-34576542
Length = 187
Score = 74.9 bits (176), Expect = 4e-14
Identities = 34/88 (38%), Positives = 54/88 (61%)
Frame = +3
Query: 303 KKSGKLLFLGLDNAGKTTLLHMLKDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGGHQQA 482
KK ++L +GLD AGKTT+L+ LK + +PT+ E + ++ FT +D+GG +
Sbjct: 15 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKI 74
Query: 483 RRVWRDYFPAVDAIVFLVDACDRPRLPE 566
R +WR YF ++F+VD+ DR R+ E
Sbjct: 75 RPLWRHYFQNTQGLIFVVDSNDRERVVE 102
>01_01_1138 -
9019049-9019159,9019525-9019606,9020059-9020177,
9020977-9021096,9021313-9021383,9021801-9021948
Length = 216
Score = 74.9 bits (176), Expect = 4e-14
Identities = 34/88 (38%), Positives = 54/88 (61%)
Frame = +3
Query: 303 KKSGKLLFLGLDNAGKTTLLHMLKDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGGHQQA 482
KK ++L +GLD AGKTT+L+ LK + +PT+ E + ++ FT +D+GG +
Sbjct: 15 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKI 74
Query: 483 RRVWRDYFPAVDAIVFLVDACDRPRLPE 566
R +WR YF ++F+VD+ DR R+ E
Sbjct: 75 RPLWRHYFQNTQGLIFVVDSNDRDRVVE 102
>10_08_1062 +
22626262-22626318,22626404-22626494,22626601-22626716,
22627035-22627094,22627204-22627269,22627726-22627914
Length = 192
Score = 73.7 bits (173), Expect = 9e-14
Identities = 33/85 (38%), Positives = 55/85 (64%)
Frame = +3
Query: 306 KSGKLLFLGLDNAGKTTLLHMLKDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGGHQQAR 485
K +++ LGLD AGKTT+L+ L + VPT+ E++ ++ FT +D+GG ++ R
Sbjct: 16 KEMRVVMLGLDAAGKTTILYKLHIGEVLSTVPTIGFNVEKVQYKNVVFTVWDVGGQEKLR 75
Query: 486 RVWRDYFPAVDAIVFLVDACDRPRL 560
+WR YF DA++++VD+ DR R+
Sbjct: 76 PLWRHYFNNTDALIYVVDSLDRERI 100
>02_05_0413 +
28773869-28773925,28774045-28774135,28774515-28774630,
28775627-28775686,28775767-28775832,28776499-28776693
Length = 194
Score = 72.1 bits (169), Expect = 3e-13
Identities = 31/82 (37%), Positives = 53/82 (64%)
Frame = +3
Query: 315 KLLFLGLDNAGKTTLLHMLKDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGGHQQARRVW 494
+++ LGLD AGKTT+L+ L + VPT+ E++ ++ FT +D+GG ++ R +W
Sbjct: 19 RVVMLGLDAAGKTTILYKLHIGEVLSTVPTIGFNVEKVQYKNVMFTVWDVGGQEKLRPLW 78
Query: 495 RDYFPAVDAIVFLVDACDRPRL 560
R YF D ++++VD+ DR R+
Sbjct: 79 RHYFNNTDGLIYVVDSLDRERI 100
>02_01_0226 +
1476529-1476585,1477207-1477297,1478247-1478362,
1478834-1478893,1479000-1479065,1479847-1480047
Length = 196
Score = 67.7 bits (158), Expect = 6e-12
Identities = 30/82 (36%), Positives = 53/82 (64%)
Frame = +3
Query: 315 KLLFLGLDNAGKTTLLHMLKDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGGHQQARRVW 494
+++ LGLD AGKTT+L+ L + VPT+ E++ ++ FT +D+GG ++ R +W
Sbjct: 19 RVVMLGLDAAGKTTILYRLHMGEVLSTVPTVGFNVEKVQYKNVVFTVWDVGGQEKLRPLW 78
Query: 495 RDYFPAVDAIVFLVDACDRPRL 560
+ Y DA++++VD+ DR R+
Sbjct: 79 KMYLSNSDALIYVVDSLDRERI 100
>08_01_0921 +
9075409-9075511,9075606-9075689,9075744-9075806,
9077163-9077181,9078227-9078338,9078902-9078949,
9079372-9079502,9079673-9079757,9079776-9079784
Length = 217
Score = 64.1 bits (149), Expect = 7e-11
Identities = 36/100 (36%), Positives = 55/100 (55%), Gaps = 15/100 (15%)
Frame = +3
Query: 306 KSGKLLFLGLDNAGKTTLLHMLKDDRLAQHVPTLHPTSEEL------SIG---------S 440
+ ++L LGLDNAGKTT+L+ L+ + +P+ P + L +IG +
Sbjct: 16 REARILVLGLDNAGKTTILYRLQMGEVVSTIPSGFPAPDSLIFFLPFAIGFNVETVQYNN 75
Query: 441 MRFTTFDLGGHQQARRVWRDYFPAVDAIVFLVDACDRPRL 560
++F +DLGG R WR YFP AI+++VD+ D RL
Sbjct: 76 IKFQVWDLGGQTSIRPYWRCYFPNTQAIIYVVDSSDTDRL 115
>03_02_0046 -
5255513-5255630,5255715-5255876,5256579-5256733,
5256811-5256892,5257790-5257827
Length = 184
Score = 61.7 bits (143), Expect = 4e-10
Identities = 30/88 (34%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Frame = +3
Query: 300 WKKSGKLLFLGLDNAGKTTLLHMLKDDRLAQH-VPTLHPTSEELSIGSMRFTTFDLGGHQ 476
+K+ +L +GL NAGKT+L++++ ++ +PT+ +++ G++ +DLGG
Sbjct: 16 FKQEMELSLIGLQNAGKTSLVNVIATGGFSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQP 75
Query: 477 QARRVWRDYFPAVDAIVFLVDACDRPRL 560
+ R +W Y AV AIV++VDA DR +
Sbjct: 76 RFRSMWERYCRAVSAIVYVVDAADRENM 103
>07_01_0844 +
6855195-6855342,6855752-6855802,6856460-6856530,
6856736-6856855,6857043-6857161,6857377-6857458,
6857592-6857597
Length = 198
Score = 59.7 bits (138), Expect = 2e-09
Identities = 36/105 (34%), Positives = 55/105 (52%), Gaps = 17/105 (16%)
Frame = +3
Query: 303 KKSGKLLFLGLDNAGKTTLLHMLKDDRLAQHVPT----------LHPTSEELSIG----- 437
KK ++L +GLD AGKTT+L+ LK + +PT L +EE
Sbjct: 15 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIDIYLYVLSNLKAITEEKGFNVETVE 74
Query: 438 --SMRFTTFDLGGHQQARRVWRDYFPAVDAIVFLVDACDRPRLPE 566
++ FT +D+GG + R +WR YF ++F+VD+ DR R+ E
Sbjct: 75 YKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVE 119
>02_02_0711 -
13180406-13180423,13180483-13180563,13181026-13181188,
13182096-13182206,13182365-13182429
Length = 145
Score = 59.7 bits (138), Expect = 2e-09
Identities = 28/88 (31%), Positives = 48/88 (54%)
Frame = +3
Query: 303 KKSGKLLFLGLDNAGKTTLLHMLKDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGGHQQA 482
+K ++L +GLDN+GKTT++ + + PTL + + +D+GG +
Sbjct: 14 EKEMRILMVGLDNSGKTTIVLKINGEDTGVISPTLGFNIKTIKYHKYSLNIWDIGGQKTI 73
Query: 483 RRVWRDYFPAVDAIVFLVDACDRPRLPE 566
R WR+YF D +V++VD+ D RL +
Sbjct: 74 RSYWRNYFEQTDGLVWVVDSSDIRRLDD 101
>03_03_0224 +
15580944-15581036,15581630-15581770,15582385-15582493,
15582598-15582659,15583704-15583807,15584058-15584160
Length = 203
Score = 49.6 bits (113), Expect = 2e-06
Identities = 31/95 (32%), Positives = 45/95 (47%), Gaps = 12/95 (12%)
Frame = +3
Query: 294 GLWK-----KSGKLLFLGLDNAGKTTLLHMLKDDRLAQH-------VPTLHPTSEELSIG 437
GLWK +L LG+D AGKTTLL +K L VPT+ +
Sbjct: 7 GLWKYIFNKTEFHVLILGVDKAGKTTLLEKIKSIYLKGEGLTPDRIVPTVGLNIGRIEDA 66
Query: 438 SMRFTTFDLGGHQQARRVWRDYFPAVDAIVFLVDA 542
+ + +DLGG R +W Y+ AI++++DA
Sbjct: 67 NAKLVFWDLGGQVGLRTIWEKYYQEAHAIIYVIDA 101
>02_05_0639 -
30552148-30552265,30552362-30552523,30553177-30553298,
30553515-30553596,30554407-30554699
Length = 258
Score = 48.4 bits (110), Expect = 4e-06
Identities = 27/88 (30%), Positives = 49/88 (55%)
Frame = +3
Query: 300 WKKSGKLLFLGLDNAGKTTLLHMLKDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGGHQQ 479
+K+ +L +GL NAGKT+L++ + + +++ G++ +DLGG ++
Sbjct: 101 FKQEMELSLVGLQNAGKTSLVNAV----------AVGFNMRKVTKGNVTIKLWDLGGQRR 150
Query: 480 ARRVWRDYFPAVDAIVFLVDACDRPRLP 563
R +W Y V AI+++VDA DR +P
Sbjct: 151 FRTMWERYCRGVSAILYVVDAADRDSIP 178
>07_03_1298 -
25592788-25592890,25593126-25593229,25593747-25593808,
25593957-25594065,25594215-25594355,25594707-25594769,
25594974-25595084,25596140-25596457
Length = 336
Score = 45.6 bits (103), Expect = 3e-05
Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 7/82 (8%)
Frame = +3
Query: 318 LLFLGLDNAGKTTLLHMLKDDRLAQH-------VPTLHPTSEELSIGSMRFTTFDLGGHQ 476
++ LG+ AGKTTLL +K L + VPT+ + +++ +DLGG
Sbjct: 153 VVILGVHKAGKTTLLEKVKSIYLKEEGLPHDRIVPTVGLNIGRIEDANVKLVFWDLGGQP 212
Query: 477 QARRVWRDYFPAVDAIVFLVDA 542
R +W Y+ A+++++D+
Sbjct: 213 GLRTIWEKYYEEAHAVIYVIDS 234
>11_06_0218 +
21361975-21362314,21362463-21362545,21363870-21363965,
21364451-21364813
Length = 293
Score = 39.1 bits (87), Expect = 0.002
Identities = 23/61 (37%), Positives = 32/61 (52%)
Frame = +3
Query: 267 WFTGVLGFLGLWKKSGKLLFLGLDNAGKTTLLHMLKDDRLAQHVPTLHPTSEELSIGSMR 446
W + V FL K K++ +GLDNAGKTT L+ L PT+ EE+ ++R
Sbjct: 4 WMSRVW-FLMFPAKEYKIVVVGLDNAGKTTTLYKLHLGEAVTAAPTIGSNVEEVVFKNIR 62
Query: 447 F 449
F
Sbjct: 63 F 63
>05_03_0561 -
15476484-15476649,15476814-15476893,15476971-15477030,
15477117-15477210,15477287-15477421,15477601-15477656,
15478359-15478460,15478544-15478651,15479206-15479283,
15479432-15479521,15480061-15480123
Length = 343
Score = 29.9 bits (64), Expect = 1.5
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +3
Query: 435 GSMRFTTFDLGGHQQARRVWRDYFPAVDAIVF 530
G + +D+GG + RR W F V+A++F
Sbjct: 174 GGEVYRLYDVGGQRNERRKWIHLFEGVNAVIF 205
>08_02_1311 -
26039741-26039930,26040185-26040316,26040528-26040676,
26040807-26040893,26041338-26041420,26042008-26042137
Length = 256
Score = 29.5 bits (63), Expect = 2.0
Identities = 22/90 (24%), Positives = 39/90 (43%), Gaps = 9/90 (10%)
Frame = +3
Query: 306 KSGKLLFLGLDNAGKTTLLHMLKDDRLAQHVPTLHPTSEELSI--------GSMR-FTTF 458
K+ ++ GL +GKT L + L+D Q T + + + G ++
Sbjct: 51 KANTIVLSGLSGSGKTILFYQLRDGSTHQGTVTSMEQNNDTFVLHSELERRGKVKPVHVV 110
Query: 459 DLGGHQQARRVWRDYFPAVDAIVFLVDACD 548
D+ GH + + + P IV++VDA D
Sbjct: 111 DVPGHARLKPKLDEVLPQAAGIVYVVDAQD 140
>02_05_0161 +
26384079-26384086,26386173-26386226,26386376-26386448,
26386775-26386822,26386906-26386953,26387990-26388061,
26388156-26388311,26388428-26388531,26388628-26388724
Length = 219
Score = 29.5 bits (63), Expect = 2.0
Identities = 20/84 (23%), Positives = 37/84 (44%), Gaps = 5/84 (5%)
Frame = +3
Query: 315 KLLFLGLDNAGKTTLLHMLKDDR-LAQHVPTL----HPTSEELSIGSMRFTTFDLGGHQQ 479
KLL +G GK+ LL DD L ++ T+ + E +++ +D G ++
Sbjct: 26 KLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQER 85
Query: 480 ARRVWRDYFPAVDAIVFLVDACDR 551
R + Y+ I+ + D D+
Sbjct: 86 FRTITSSYYRGAHGIIIVYDVTDQ 109
>01_05_0340 -
21139885-21139978,21140169-21140272,21140379-21140534,
21140622-21140693,21140782-21140829,21140923-21140970,
21141807-21141879,21142333-21142346
Length = 202
Score = 29.5 bits (63), Expect = 2.0
Identities = 20/84 (23%), Positives = 37/84 (44%), Gaps = 5/84 (5%)
Frame = +3
Query: 315 KLLFLGLDNAGKTTLLHMLKDDR-LAQHVPTL----HPTSEELSIGSMRFTTFDLGGHQQ 479
KLL +G GK+ LL DD L ++ T+ + E +++ +D G ++
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQER 69
Query: 480 ARRVWRDYFPAVDAIVFLVDACDR 551
R + Y+ I+ + D D+
Sbjct: 70 FRTITSSYYRGAHGIIVVYDVTDQ 93
>01_01_0565 -
4159946-4160042,4160140-4160243,4160378-4160533,
4160629-4160700,4161796-4161843,4161923-4161970,
4162295-4162367,4163188-4163201
Length = 203
Score = 29.5 bits (63), Expect = 2.0
Identities = 20/84 (23%), Positives = 37/84 (44%), Gaps = 5/84 (5%)
Frame = +3
Query: 315 KLLFLGLDNAGKTTLLHMLKDDR-LAQHVPTL----HPTSEELSIGSMRFTTFDLGGHQQ 479
KLL +G GK+ LL DD L ++ T+ + E +++ +D G ++
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQER 69
Query: 480 ARRVWRDYFPAVDAIVFLVDACDR 551
R + Y+ I+ + D D+
Sbjct: 70 FRTITSSYYRGAHGIIIVYDVTDQ 93
>07_03_0629 - 20076676-20080390,20080508-20080576,20081335-20081660
Length = 1369
Score = 29.1 bits (62), Expect = 2.6
Identities = 17/62 (27%), Positives = 27/62 (43%)
Frame = +3
Query: 345 GKTTLLHMLKDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGGHQQARRVWRDYFPAVDAI 524
G +L+H++ DDR + H + SI +M+F FDL W ++ I
Sbjct: 1218 GLQSLIHLVIDDRF-MYYRYYHMLNTLCSIRTMKFCAFDLSEFTTEDEEWLQQLQSLQEI 1276
Query: 525 VF 530
F
Sbjct: 1277 QF 1278
>12_01_0028 +
242016-242467,242547-242918,243027-243182,245007-245089,
245159-245222,245704-246001,246616-246726,247059-247100
Length = 525
Score = 28.7 bits (61), Expect = 3.4
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +1
Query: 247 QKCLSSTGSLECWDFLVY 300
+ C+S+TGSLE W+ L Y
Sbjct: 352 EPCISATGSLELWNILKY 369
>11_01_0029 +
226459-226973,227053-227424,227533-227688,229513-229595,
229665-229728,230209-230596
Length = 525
Score = 28.7 bits (61), Expect = 3.4
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +1
Query: 247 QKCLSSTGSLECWDFLVY 300
+ C+S+TGSLE W+ L Y
Sbjct: 373 EPCISATGSLELWNILKY 390
>07_03_1521 +
27419859-27420106,27422050-27423363,27423885-27424308,
27424540-27424968,27425228-27425305,27426581-27426839,
27428542-27428552
Length = 920
Score = 28.7 bits (61), Expect = 3.4
Identities = 14/24 (58%), Positives = 14/24 (58%)
Frame = +2
Query: 461 PRWASAGASCVARLLPRGGRDSVP 532
PR AGASCVA G RD VP
Sbjct: 852 PRRPGAGASCVAAARAVGQRDDVP 875
>07_03_0064 +
12995669-12995904,12996299-12996533,12998223-12998384,
12999446-12999566,13000095-13001608
Length = 755
Score = 28.7 bits (61), Expect = 3.4
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -3
Query: 540 RRPGTLSRPPRGSSRATHDAPADA 469
+RPG LS P RG+ A D P +A
Sbjct: 204 KRPGRLSEPQRGTLEAVVDKPIEA 227
>02_05_1134 -
34352154-34352375,34353683-34353746,34353820-34354859,
34355193-34355261,34355502-34355606,34355992-34356161,
34356244-34356351,34356397-34356525,34356577-34356681,
34357186-34357475,34357575-34357679,34358195-34358289,
34358474-34358569,34358660-34358782,34359120-34359174,
34359254-34359417,34359881-34359971,34360180-34360334,
34360823-34361002,34361314-34361487,34361776-34361917,
34362023-34362325,34362443-34362522
Length = 1354
Score = 28.7 bits (61), Expect = 3.4
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = -2
Query: 388 ASLSSFNICKSVVFPALSSPRNKSLPDFFHRPRNPNTPVNQSRINIFESGT*RNNYTFR 212
A +S +I + PA+ P++ L D + + PVN S I F+S T + N+ F+
Sbjct: 765 AKMSDTSIAGTKSAPAV--PQDMDLLDGLPSNTSVSGPVNHSSITAFQSATLKINFNFK 821
>01_01_0134 -
1224084-1224269,1224578-1224662,1224763-1225050,
1225114-1225334,1225511-1225642,1226218-1226494,
1226722-1226770,1226993-1227088,1227779-1227911,
1228241-1228391,1228484-1228674,1229167-1229382
Length = 674
Score = 28.7 bits (61), Expect = 3.4
Identities = 18/36 (50%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +3
Query: 306 KSGKLLFL-GLDNAGKTTLLHMLKDDRLAQHVPTLH 410
KSG+LL L G +GKTTLL++L A P+LH
Sbjct: 85 KSGRLLALMGPSGSGKTTLLNVLAGQLTAS--PSLH 118
>09_02_0556 + 10637362-10637575,10637728-10637825
Length = 103
Score = 28.3 bits (60), Expect = 4.5
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = -3
Query: 564 PADVAGHTRR--PGTLSRPPRGSSRATHDAPADAHRG 460
P+ V+G RR P TL+ PP S + P +A RG
Sbjct: 31 PSAVSGRHRRRAPATLAVPPLPRSPSLSSVPVEARRG 67
>05_07_0205 -
28402436-28402505,28402604-28402681,28402789-28402968,
28403051-28403140,28403258-28403375,28403461-28403517,
28404155-28404224,28404317-28404319
Length = 221
Score = 28.3 bits (60), Expect = 4.5
Identities = 21/86 (24%), Positives = 37/86 (43%), Gaps = 5/86 (5%)
Frame = +3
Query: 309 SGKLLFLGLDNAGKTTLLHM-LKDDRLAQHVPTL----HPTSEELSIGSMRFTTFDLGGH 473
S KL+ +G GKTT + L + ++ PT+ HP + G +RF +D G
Sbjct: 13 SFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFTTNCGKIRFYCWDTAGQ 72
Query: 474 QQARRVWRDYFPAVDAIVFLVDACDR 551
++ + Y+ + + D R
Sbjct: 73 EKFGGLRDGYYIHGQCAIIMFDVTSR 98
>01_05_0673 +
24183512-24183514,24183625-24183694,24184203-24184259,
24184348-24184465,24185044-24185133,24185209-24185388,
24185474-24185551,24185642-24185711
Length = 221
Score = 27.5 bits (58), Expect = 7.9
Identities = 21/86 (24%), Positives = 37/86 (43%), Gaps = 5/86 (5%)
Frame = +3
Query: 309 SGKLLFLGLDNAGKTTLLHM-LKDDRLAQHVPTL----HPTSEELSIGSMRFTTFDLGGH 473
S KL+ +G GKTT + L + ++ PT+ HP + G +RF +D G
Sbjct: 13 SFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQ 72
Query: 474 QQARRVWRDYFPAVDAIVFLVDACDR 551
++ + Y+ + + D R
Sbjct: 73 EKFGGLRDGYYIHGQCAIIMFDVTSR 98
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,508,699
Number of Sequences: 37544
Number of extensions: 286039
Number of successful extensions: 947
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 912
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 942
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1305140760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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