Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12o24r
(450 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 23 2.0
AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine beta-sy... 22 2.7
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 22 3.6
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 21 4.7
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 21 4.7
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 21 8.2
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 21 8.2
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 21 8.2
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 21 8.2
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 21 8.2
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 21 8.2
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 21 8.2
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 21 8.2
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 22.6 bits (46), Expect = 2.0
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = -1
Query: 246 FITRGDMEVRWRHSTK 199
F+TRGD+ + W K
Sbjct: 381 FLTRGDLWISWEEGMK 396
>AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine
beta-synthase protein.
Length = 504
Score = 22.2 bits (45), Expect = 2.7
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = -3
Query: 163 TNGFFPDGVKNPIPKPWWN 107
T GF +N + K WWN
Sbjct: 351 TRGFLQPVCQNEMNKWWWN 369
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 21.8 bits (44), Expect = 3.6
Identities = 8/23 (34%), Positives = 12/23 (52%)
Frame = +2
Query: 287 TISRSDTTDLRVVNSKAYEIWCP 355
T S+ + + K+YEIW P
Sbjct: 96 TWKSSEFDSINSIRVKSYEIWVP 118
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 21.4 bits (43), Expect = 4.7
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = -3
Query: 406 RRNSAGYXXNFHRYQLEW 353
RR S N HR Q+ W
Sbjct: 88 RRQSRSMDLNAHREQMSW 105
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 21.4 bits (43), Expect = 4.7
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = -3
Query: 169 GGTNGFFPDGVKNPIPKPWWNNSPMAATDFWN 74
GG G P+G+K P + P +FWN
Sbjct: 1136 GGIPG--PNGIKMPSFMEGMPHLPFTPFNFWN 1165
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 20.6 bits (41), Expect = 8.2
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +1
Query: 49 RSEANRLGHSRNLWL 93
R++ RL H R +WL
Sbjct: 30 RTKEERLQHRREVWL 44
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 20.6 bits (41), Expect = 8.2
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +1
Query: 49 RSEANRLGHSRNLWL 93
R++ RL H R +WL
Sbjct: 30 RTKEERLQHRREVWL 44
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 20.6 bits (41), Expect = 8.2
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +1
Query: 49 RSEANRLGHSRNLWL 93
R++ RL H R +WL
Sbjct: 30 RTKEERLQHRREVWL 44
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 20.6 bits (41), Expect = 8.2
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +1
Query: 49 RSEANRLGHSRNLWL 93
R++ RL H R +WL
Sbjct: 30 RTKEERLQHRREVWL 44
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 20.6 bits (41), Expect = 8.2
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +1
Query: 49 RSEANRLGHSRNLWL 93
R++ RL H R +WL
Sbjct: 30 RTKEERLQHRREVWL 44
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 20.6 bits (41), Expect = 8.2
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +1
Query: 49 RSEANRLGHSRNLWL 93
R++ RL H R +WL
Sbjct: 30 RTKEERLQHRREVWL 44
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 20.6 bits (41), Expect = 8.2
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +1
Query: 49 RSEANRLGHSRNLWL 93
R++ RL H R +WL
Sbjct: 30 RTKEERLQHRREVWL 44
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 20.6 bits (41), Expect = 8.2
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +1
Query: 49 RSEANRLGHSRNLWL 93
R++ RL H R +WL
Sbjct: 30 RTKEERLQHRREVWL 44
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,547
Number of Sequences: 438
Number of extensions: 3241
Number of successful extensions: 18
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11820384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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