Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12o11r
         (678 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...   167   1e-43
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.   161   7e-42
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...   161   7e-42
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...   107   1e-25
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    24   1.5  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    23   2.7  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    23   2.7  

>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score =  167 bits (405), Expect = 1e-43
 Identities = 84/218 (38%), Positives = 124/218 (56%)
 Frame = -3

Query: 664 NWVVGNHDNSRMATRYGASLVDGINMLVLLLPGVAVTYMGEEIGLEDGYVSWEDTVDPSG 485
           NWV GNHDN R+A+R+G    D I ML L LPG+ V Y G+EIG+ED + ++++TVDP+G
Sbjct: 347 NWVSGNHDNHRVASRFGRQRGDEIVMLTLTLPGIGVVYNGDEIGMEDRWFTYQETVDPAG 406

Query: 484 CNTNDPIKYVESSRDPERTPFHWNPEKNAGFSTADKTWLPMAEGYETLNVEVQKASERSH 305
           CN   P KY   SRDPERTP+ W+   +AGFS  +KTWLP+ E Y++LN+  QK    SH
Sbjct: 407 CNAG-PAKYYLKSRDPERTPYQWDNSTSAGFSQTNKTWLPVNENYKSLNLAAQKREYYSH 465

Query: 304 LKVYKALSDLRQENTFRYGRYESLALNQDIFVFKRWLNDVIYLVVVNMRDVEHNIDLTYF 125
              +K+LS L+++     G  E   ++  +   KR L +   +V++N       ++LT  
Sbjct: 466 YVAFKSLSYLKKQPVIANGSLEVDVIDGRVLSVKRELGNDTVIVMMNFSKNPVTVNLTKL 525

Query: 124 ENVSGNVAVSIRSVNSPKNEGDTFDAKSLPVVGFEGLV 11
              +  V  +   V S  + G+     S+ + G    V
Sbjct: 526 HPPADLVVYACNVVGSGLSHGNWIYPASMTIPGSNSAV 563


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score =  161 bits (390), Expect = 7e-42
 Identities = 79/215 (36%), Positives = 115/215 (53%), Gaps = 1/215 (0%)
 Frame = -3

Query: 664 NWVVGNHDNSRMATRYGASLVDGINMLVLLLPGVAVTYMGEEIGLEDGYVSWEDTVDPSG 485
           NWV GNHD  R+ +R+G      I  + LLLPGVAV Y G+EIG+ D Y+SWEDT DP G
Sbjct: 341 NWVPGNHDQLRLVSRFGEEKARMITTMSLLLPGVAVNYYGDEIGMSDTYISWEDTQDPQG 400

Query: 484 CNTNDPIKYVESSRDPERTPFHWNPEKNAGFSTADKTWLPMAEGYETLNVEVQKASERSH 305
           C       Y   SRDP RTPF W+   +AGFS++  TWL + E Y+T+N+  +K  + S 
Sbjct: 401 CGAGKE-NYQTMSRDPARTPFQWDDSVSAGFSSSSNTWLRVNENYKTVNLAAEKKDKNSF 459

Query: 304 LKVYKALSDLRQENTFRYGRYESLALNQDIFVFKRWLNDVIYL-VVVNMRDVEHNIDLTY 128
             ++K  + L++   F+     +  LN ++F F R   D   L  ++N  + E  +DL  
Sbjct: 460 FNMFKKFASLKKSPYFKEANLNTRMLNDNVFAFSRETEDNGSLYAILNFSNEEQIVDLKA 519

Query: 127 FENVSGNVAVSIRSVNSPKNEGDTFDAKSLPVVGF 23
           F NV   + +   + NS        +   +  +GF
Sbjct: 520 FNNVPKKLNMFYNNFNSDIKSISNNEQVKVSALGF 554


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score =  161 bits (390), Expect = 7e-42
 Identities = 79/215 (36%), Positives = 115/215 (53%), Gaps = 1/215 (0%)
 Frame = -3

Query: 664 NWVVGNHDNSRMATRYGASLVDGINMLVLLLPGVAVTYMGEEIGLEDGYVSWEDTVDPSG 485
           NWV GNHD  R+ +R+G      I  + LLLPGVAV Y G+EIG+ D Y+SWEDT DP G
Sbjct: 341 NWVPGNHDQLRLVSRFGEEKARMITTMSLLLPGVAVNYYGDEIGMSDTYISWEDTQDPQG 400

Query: 484 CNTNDPIKYVESSRDPERTPFHWNPEKNAGFSTADKTWLPMAEGYETLNVEVQKASERSH 305
           C       Y   SRDP RTPF W+   +AGFS++  TWL + E Y+T+N+  +K  + S 
Sbjct: 401 CGAGKE-NYQTMSRDPARTPFQWDDSVSAGFSSSSNTWLRVNENYKTVNLAAEKKDKNSF 459

Query: 304 LKVYKALSDLRQENTFRYGRYESLALNQDIFVFKRWLNDVIYL-VVVNMRDVEHNIDLTY 128
             ++K  + L++   F+     +  LN ++F F R   D   L  ++N  + E  +DL  
Sbjct: 460 FNMFKKFASLKKSPYFKEANLNTRMLNDNVFAFSRETEDNGSLYAILNFSNEEQIVDLKA 519

Query: 127 FENVSGNVAVSIRSVNSPKNEGDTFDAKSLPVVGF 23
           F NV   + +   + NS        +   +  +GF
Sbjct: 520 FNNVPKKLNMFYNNFNSDIKSISNNEQVKVSALGF 554


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score =  107 bits (256), Expect = 1e-25
 Identities = 72/224 (32%), Positives = 107/224 (47%), Gaps = 6/224 (2%)
 Frame = -3

Query: 664 NWVVGNHDNSRMATRYGASLVDGINMLVLLLPGVAVTYMGEEIGLEDGYVSWEDTVDPSG 485
           NWV+GNHD  R+ TRY     D + ML ++LPGVAVTY GEEIG+ D             
Sbjct: 354 NWVMGNHDRVRVGTRYPGR-ADHMIMLEMILPGVAVTYYGEEIGMVD------------- 399

Query: 484 CNTNDPIKYVESSRDPERTPFHWNPEKNAGFS-----TADKTWLPMAEGYET-LNVEVQK 323
              N  I Y    RD  RTPF W+   NAGFS       +K WLP+   Y++ LN+E +K
Sbjct: 400 ---NTTI-YKYDVRDGCRTPFQWDNSINAGFSKIAENLLEKNWLPVHTSYKSGLNLEQEK 455

Query: 322 ASERSHLKVYKALSDLRQENTFRYGRYESLALNQDIFVFKRWLNDVIYLVVVNMRDVEHN 143
               SH  +Y  L+ LR+ +  + G +    LN+ +    R   +    +++N       
Sbjct: 456 KDSISHYHLYTNLTALRKRDVLKKGNFTIEILNKTVLAVVRQSEEEAVSLLINFSKNNTI 515

Query: 142 IDLTYFENVSGNVAVSIRSVNSPKNEGDTFDAKSLPVVGFEGLV 11
           +D++   N   N  +   SVNS      T +  ++ + G   ++
Sbjct: 516 VDISKLVNKRNNAKIYTSSVNSNLTVNQTVNPVAINIPGDTSII 559


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 7/24 (29%), Positives = 16/24 (66%)
 Frame = +3

Query: 378 LSAVENPAFFSGFQWKGVLSGSLD 449
           +S ++   +F GF W+G+ + +L+
Sbjct: 617 ISEIQKHKWFDGFNWEGLRARTLE 640


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +2

Query: 371 PGLVSGRESSVFLGVPMERSPFG 439
           P  V  +E  VF G+P  + P G
Sbjct: 51  PRTVLDKEVHVFYGIPFAKPPIG 73


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +2

Query: 371 PGLVSGRESSVFLGVPMERSPFG 439
           P  V  +E  VF G+P  + P G
Sbjct: 51  PRTVLDKEVHVFYGIPFAKPPIG 73


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,972
Number of Sequences: 438
Number of extensions: 4473
Number of successful extensions: 19
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20586735
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)