Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12o08f
         (601 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_O96383 Cluster: Immune-related Hdd13; n=1; Hyphantria c...   271   1e-71
UniRef50_UPI000023D6AE Cluster: hypothetical protein FG04299.1; ...    37   0.32 
UniRef50_A0RW12 Cluster: Putative uncharacterized protein; n=1; ...    35   1.3  
UniRef50_Q2JAC8 Cluster: Putative ATP/GTP binding protein; n=2; ...    34   2.2  
UniRef50_A1WIW2 Cluster: Short-chain dehydrogenase/reductase SDR...    34   2.9  
UniRef50_P20999 Cluster: Protein B2; n=37; Orthopoxvirus|Rep: Pr...    34   2.9  
UniRef50_UPI0000498B77 Cluster: hypothetical protein 4.t00022; n...    33   5.1  
UniRef50_Q4S220 Cluster: Chromosome undetermined SCAF14764, whol...    33   6.8  
UniRef50_A4AIN3 Cluster: Glycerol operon regulatory protein; n=3...    33   6.8  
UniRef50_A1WUK0 Cluster: Phosphoglycolate phosphatase; n=2; Ecto...    33   6.8  
UniRef50_O77132 Cluster: Non-receptor protein-tyrosine kinase CS...    33   6.8  
UniRef50_Q2QMC6 Cluster: Putative uncharacterized protein; n=2; ...    32   9.0  

>UniRef50_O96383 Cluster: Immune-related Hdd13; n=1; Hyphantria
           cunea|Rep: Immune-related Hdd13 - Hyphantria cunea (Fall
           webworm)
          Length = 266

 Score =  271 bits (664), Expect = 1e-71
 Identities = 121/174 (69%), Positives = 144/174 (82%)
 Frame = +2

Query: 77  MSKRTVLNENYKGIVESMSIPAEIHERNGKKYASVGSILPIHCCPPEELERRAESTHHYC 256
           MSKRT LNENYKG+VE +SIPAE+HER+GKKYAS GS +PIH C  EE++R A  THHYC
Sbjct: 26  MSKRTALNENYKGLVEELSIPAELHERDGKKYASFGSTIPIHSCSAEEIKRYANKTHHYC 85

Query: 257 GVFTDELLAPLEELAYVRLDENTAEKVFINRAKRILIVSSDGHLAQWRCAPTFESANRYI 436
            VFT+++LAPL EL YVRLDENTAEKVFINR KRIL+VSSDG LAQWRCAPTFES N YI
Sbjct: 86  DVFTEQVLAPLGELVYVRLDENTAEKVFINRNKRILLVSSDGELAQWRCAPTFESPNSYI 145

Query: 437 AGTPIVDQRGGVISVVVAKKNNHYAVSSFEGEGGYFESTQNWKVVEPAAGGYAY 598
           AG PIV++ G ++SVV AKK NHYAVS+FEGEGGYF++ + W++++   G   Y
Sbjct: 146 AGAPIVNKDGELVSVVTAKKGNHYAVSTFEGEGGYFDTAEPWRILDSPDGANIY 199


>UniRef50_UPI000023D6AE Cluster: hypothetical protein FG04299.1;
           n=1; Gibberella zeae PH-1|Rep: hypothetical protein
           FG04299.1 - Gibberella zeae PH-1
          Length = 899

 Score = 37.1 bits (82), Expect = 0.32
 Identities = 18/38 (47%), Positives = 23/38 (60%)
 Frame = +3

Query: 156 ETARSTRAWGPYCRYTAARPKSWSDALRARTTTAACSP 269
           +TARSTRA G      A RP S +D+ R+ +T   CSP
Sbjct: 737 DTARSTRARGKSVSNVAGRPTSMADSTRSSSTINLCSP 774


>UniRef50_A0RW12 Cluster: Putative uncharacterized protein; n=1;
            Cenarchaeum symbiosum|Rep: Putative uncharacterized
            protein - Cenarchaeum symbiosum
          Length = 10044

 Score = 35.1 bits (77), Expect = 1.3
 Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
 Frame = -1

Query: 514  DGIVVVFLRHNDGDDAPALVDDGRAGDVPVR--RLEGRRAPPLRQVPVA 374
            D + V  L H +GDDAPA++D    G++PV    L G  +P   ++P A
Sbjct: 9465 DPVRVAVLFHLEGDDAPAVLDAPGVGEIPVLPIPLPGGDSPSFMELPGA 9513


>UniRef50_Q2JAC8 Cluster: Putative ATP/GTP binding protein; n=2;
           Frankia|Rep: Putative ATP/GTP binding protein - Frankia
           sp. (strain CcI3)
          Length = 727

 Score = 34.3 bits (75), Expect = 2.2
 Identities = 30/91 (32%), Positives = 40/91 (43%), Gaps = 2/91 (2%)
 Frame = -1

Query: 565 LPVLCALKVSAFTLEGGDGIVVVFLRHNDGDDAPALVDDGRAGDVPVRRLEGRRAPPLRQ 386
           LP L    V   TL+   G V V  R  D DD  AL  D R   V  R L G   PP R 
Sbjct: 289 LPSLGEFTVRHSTLDDVVGAVAV--RGTDPDDVAALKGDARMATVIRRALHGAIRPPTRP 346

Query: 385 VPVA*HY-QYALGS-VYEDLLSSILVESNVG 299
           V V     ++ +G+  + DL + ++ +   G
Sbjct: 347 VSVDTRVGRWTVGADEFVDLAADLIAQLGAG 377


>UniRef50_A1WIW2 Cluster: Short-chain dehydrogenase/reductase SDR;
           n=3; Burkholderiales|Rep: Short-chain
           dehydrogenase/reductase SDR - Verminephrobacter eiseniae
           (strain EF01-2)
          Length = 271

 Score = 33.9 bits (74), Expect = 2.9
 Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 7/114 (6%)
 Frame = -1

Query: 472 DAPALVDDGRAGDVPVRRLEGRRAPPLRQVPVA*HYQYALGSVYEDL--LSSIL---VES 308
           DAP  V    AG +P RR +G R P    +P A   +    ++Y  +    S+L   VE 
Sbjct: 83  DAPVTVLVNNAGIIPERREKGGRTPAFLDMPTADWAKIVDLNLYGTMNCCHSVLPGMVER 142

Query: 307 NVGQFLERRQQF--VGEHXXXXXXXXXXXLQLFGRAAVYRQYGPHARVLLAVSL 152
           N G+ +    +   +GE            +  FGR A+ R++G HA  + +V+L
Sbjct: 143 NGGRIINIISEAGRIGEANMAVYSGAKAAMAGFGR-ALAREHGRHAITVNSVAL 195


>UniRef50_P20999 Cluster: Protein B2; n=37; Orthopoxvirus|Rep:
           Protein B2 - Vaccinia virus (strain Copenhagen) (VACV)
          Length = 219

 Score = 33.9 bits (74), Expect = 2.9
 Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
 Frame = +2

Query: 407 PTFESANRYIA-GTPIVDQRGGVISVVVAKKNNHYAVS 517
           P FE  N Y+  G PI DQ G  IS++  +  N+YA+S
Sbjct: 67  PMFE-CNEYLQIGDPIHDQEGNQISIITYRHKNYYALS 103


>UniRef50_UPI0000498B77 Cluster: hypothetical protein 4.t00022; n=2;
           Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
           protein 4.t00022 - Entamoeba histolytica HM-1:IMSS
          Length = 619

 Score = 33.1 bits (72), Expect = 5.1
 Identities = 32/147 (21%), Positives = 53/147 (36%)
 Frame = +2

Query: 128 MSIPAEIHERNGKKYASVGSILPIHCCPPEELERRAESTHHYCGVFTDELLAPLEELAYV 307
           M +  E+ E N K Y        + C          E T +  G++   +    +E   +
Sbjct: 431 MIVANELQEENTKSYIIGTKNGMVLCVDMNRKRSEIEETSNIRGIYIKNIDIREKEAVVI 490

Query: 308 RLDENTAEKVFINRAKRILIVSSDGHLAQWRCAPTFESANRYIAGTPIVDQRGGVISVVV 487
              E   +K +     RILI SSDG   ++      E     I GT  +     V+ +  
Sbjct: 491 VEYEEVGDKAY-----RILIESSDGQKKEYMKEKLEEHTLMNIEGTAGITTYSFVVDIPT 545

Query: 488 AKKNNHYAVSSFEGEGGYFESTQNWKV 568
             +     +S +  +G   EST  + V
Sbjct: 546 RPQTITMKISGYNSKGIKTESTIEYSV 572


>UniRef50_Q4S220 Cluster: Chromosome undetermined SCAF14764, whole
            genome shotgun sequence; n=4; cellular organisms|Rep:
            Chromosome undetermined SCAF14764, whole genome shotgun
            sequence - Tetraodon nigroviridis (Green puffer)
          Length = 2515

 Score = 32.7 bits (71), Expect = 6.8
 Identities = 16/46 (34%), Positives = 21/46 (45%)
 Frame = +3

Query: 168  STRAWGPYCRYTAARPKSWSDALRARTTTAACSPTNCWRRSRNWPT 305
            STR+W       + RP SW    R  T+   C   +CWR S   P+
Sbjct: 1692 STRSWRWTASSPSTRPTSWGWRRRRATSCTTC--CSCWRSSTTGPS 1735


>UniRef50_A4AIN3 Cluster: Glycerol operon regulatory protein; n=3;
           Actinobacteria (class)|Rep: Glycerol operon regulatory
           protein - marine actinobacterium PHSC20C1
          Length = 257

 Score = 32.7 bits (71), Expect = 6.8
 Identities = 15/48 (31%), Positives = 27/48 (56%)
 Frame = +2

Query: 77  MSKRTVLNENYKGIVESMSIPAEIHERNGKKYASVGSILPIHCCPPEE 220
           +++R +  E  + ++   SI A I +RNG   A+V  ++P    PPE+
Sbjct: 177 IAERGIATEEDEAVLGESSIAAPIADRNGSVIAAVAVVMPSSEWPPED 224


>UniRef50_A1WUK0 Cluster: Phosphoglycolate phosphatase; n=2;
           Ectothiorhodospiraceae|Rep: Phosphoglycolate phosphatase
           - Halorhodospira halophila (strain DSM 244 / SL1)
           (Ectothiorhodospirahalophila (strain DSM 244 / SL1))
          Length = 230

 Score = 32.7 bits (71), Expect = 6.8
 Identities = 15/37 (40%), Positives = 16/37 (43%)
 Frame = +3

Query: 171 TRAWGPYCRYTAARPKSWSDALRARTTTAACSPTNCW 281
           TRA    C  T AR K   D +R    T  C P  CW
Sbjct: 129 TRAGAVVCGDTLARAKPHPDPIRHAAATLGCPPEACW 165


>UniRef50_O77132 Cluster: Non-receptor protein-tyrosine kinase CSK;
           n=1; Hydra vulgaris|Rep: Non-receptor protein-tyrosine
           kinase CSK - Hydra attenuata (Hydra) (Hydra vulgaris)
          Length = 467

 Score = 32.7 bits (71), Expect = 6.8
 Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
 Frame = -1

Query: 457 VDDGRAGDVPVRRLEGRRAPPLRQVPVA*HYQYALGSVYEDLLSSILVESNVGQFLERRQ 278
           V DGR G +P+  ++ RRA  L ++P      +  G +  +    +L    VG FL R  
Sbjct: 66  VSDGRTGLIPINYVQQRRALHLHEMP------WFFGKITREKAEELLTPREVGLFLVRES 119

Query: 277 -QFVGEH 260
             F G++
Sbjct: 120 TNFPGDY 126


>UniRef50_Q2QMC6 Cluster: Putative uncharacterized protein; n=2;
           Oryza sativa (japonica cultivar-group)|Rep: Putative
           uncharacterized protein - Oryza sativa subsp. japonica
           (Rice)
          Length = 351

 Score = 32.3 bits (70), Expect = 9.0
 Identities = 20/63 (31%), Positives = 28/63 (44%)
 Frame = +3

Query: 153 RETARSTRAWGPYCRYTAARPKSWSDALRARTTTAACSPTNCWRRSRNWPTLDSTRILLR 332
           R  A   R  GP     A   +SW+ +       A  SP  C+RR + W +L S+    R
Sbjct: 237 RPHANVRRTNGPRSSPAAMAMESWARSASDAAADAGASP-GCFRRIKIWSSLSSSSSCSR 295

Query: 333 RSS 341
           RS+
Sbjct: 296 RSA 298


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 564,836,422
Number of Sequences: 1657284
Number of extensions: 10750692
Number of successful extensions: 36583
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 35251
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36567
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 42317807226
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)